RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PSMC3P17980 439 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 EIF2DP41214 584 aaKnown RBP17.98■□□□□ 0.47
HOXC11-201ENST00000243082 GRIA3P42263 894 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 CNTN1Q12860 1018 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 CHIT1Q13231 466 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 AGTRAPQ6RW13 159 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 THOC6Q86W42 341 aaKnown RBP17.98■□□□□ 0.47
HOXC11-201ENST00000243082 GALNT13Q8IUC8 556 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 HID1Q8IV36 788 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 PKP4Q99569 1192 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 ZCCHC2Q9C0B9 1178 aaKnown RBP17.98■□□□□ 0.47
HOXC11-201ENST00000243082 ALG2Q9H553 416 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 SLC28A3Q9HAS3 691 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 TRIM39Q9HCM9 518 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 ACTR3BQ9P1U1 418 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 ATXN10Q9UBB4 475 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 FADS3Q9Y5Q0 445 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 DENND4AQ7Z401 1863 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 SERTM1A2A2V5 107 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 LIN7AO14910 233 aaPredicted RBP17.98■□□□□ 0.47
HOXC11-201ENST00000243082 STAMBPO95630 424 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 BCKDHAP12694 445 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 JUPP14923 745 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 CD22P20273 847 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 PRPH2P23942 346 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 GRIA2P42262 883 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 HALP42357 657 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 LIPEQ05469 1076 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 PIP5KL1Q5T9C9 394 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 LCN8Q6JVE9 175 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 KLHDC8AQ8IYD2 350 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 ADCY4Q8NFM4 1077 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 ATL1Q8WXF7 558 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 GATA6Q92908 595 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 CIDEBQ9UHD4 219 aa17.98■□□□□ 0.47
HOXC11-201ENST00000243082 AQP12BA6NM10 295 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 ZNF839A8K0R7 811 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 NPIPB8E9PQR5 432 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 H3BM21 787 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 MAPK9P45984 424 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 EEFSECP57772 596 aaKnown RBP17.97■□□□□ 0.47
HOXC11-201ENST00000243082 NAE1Q13564 534 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 IRAK1BP1Q5VVH5 260 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 LIPJQ5W064 366 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 FRG2Q64ET8 278 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 PARM1Q6UWI2 310 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 PTRH1Q86Y79 214 aaKnown RBP17.97■□□□□ 0.47
HOXC11-201ENST00000243082 SPPL2CQ8IUH8 684 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 TRAPPC5Q8IUR0 188 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 ZNF547Q8IVP9 402 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 AQP12AQ8IXF9 295 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 CFAP206Q8IYR0 622 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 KRTCAP2Q8N6L1 136 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 GLB1L3Q8NCI6 653 aaPredicted RBP17.97■□□□□ 0.47
HOXC11-201ENST00000243082 CXorf40AQ8TE69 158 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 CANT1Q8WVQ1 401 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 FGF14Q92915 247 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 RAB7BQ96AH8 199 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 FRG2BQ96QU4 278 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 UHRF1Q96T88 793 aaPredicted RBP17.97■□□□□ 0.47
HOXC11-201ENST00000243082 ZBTB18Q99592 522 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 DPY30Q9C005 99 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 CLMPQ9H6B4 373 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 DLGAP4Q9Y2H0 992 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 NEUROG3Q9Y4Z2 214 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 CEP290O15078 2479 aa17.97■□□□□ 0.47
HOXC11-201ENST00000243082 VGLL3A8MV65 326 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 UGDHO60701 494 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 SLC16A8O95907 504 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 UQCRBP14927 111 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 IMPA1P29218 277 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 DRD3P35462 400 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 PWP1Q13610 501 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 FAM174BQ3ZCQ3 159 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 PRR23BQ6ZRT6 265 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 PLA2G15Q8NCC3 412 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 OR56A3Q8NH54 315 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 LRTOMTQ8WZ04 291 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 LINC00615Q96LM1 132 aaPredicted RBP17.96■□□□□ 0.47
HOXC11-201ENST00000243082 MAGEB10Q96LZ2 347 aaPredicted RBP17.96■□□□□ 0.47
HOXC11-201ENST00000243082 FOPNLQ96NB1 174 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 OR4K3Q96R72 315 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 RPP25Q9BUL9 199 aaKnown RBP17.96■□□□□ 0.47
HOXC11-201ENST00000243082 C15orf38-AP3S2A0A0A6YYH1 394 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 ARPC2O15144 300 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 C1orf105O95561 183 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 ZNF8P17098 575 aaPredicted RBP17.96■□□□□ 0.47
HOXC11-201ENST00000243082 GDI1P31150 447 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 IRF8Q02556 426 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 RAB30Q15771 203 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 ARPINQ7Z6K5 226 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 IFNEQ86WN2 208 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 ICA1LQ8NDH6 482 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 CATSPER1Q8NEC5 780 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 SLC13A3Q8WWT9 602 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 GTF2H4Q92759 462 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 ELSPBP1Q96BH3 223 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 CMTM7Q96FZ5 175 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 PPM1MQ96MI6 270 aa17.96■□□□□ 0.47
HOXC11-201ENST00000243082 NR1H4Q96RI1 486 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms