RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ASB9Q96DX5 294 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 RPF2Q9H7B2 306 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TNFRSF12AQ9NP84 129 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 EI24O14681 340 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 PCNAP12004 261 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ATP6V1B2P21281 511 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TPD52P55327 224 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 YBX1P67809 324 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ACVR1Q04771 509 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 PPP1R8Q12972 351 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 IER5LQ5T953 404 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TMEM214Q6NUQ4 689 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TMEM207Q6UWW9 146 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZNF597Q96LX8 424 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 CDX2Q99626 313 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ADI1Q9BV57 179 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 CCDC90BQ9GZT6 254 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZDHHC3Q9NYG2 299 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TMEM98Q9Y2Y6 226 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 NUMA1Q14980 2115 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TMEM247A6NEH6 219 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 CBFA2T3O75081 653 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 HIST1H2AGP0C0S8 130 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 HIST1H2ADP20671 130 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ELK4P28324 431 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 CA5AP35218 305 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ALDH3B2P48448 385 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 BCAP31P51572 246 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 RHDQ02161 417 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ACAP2Q15057 778 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 PGS1Q32NB8 556 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 VPS26BQ4G0F5 336 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 KIAA1211LQ6NV74 962 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TMEM220Q6QAJ8 160 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 PIWIL3Q7Z3Z3 882 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 DDIASQ8IXT1 998 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 GPR150Q8NGU9 434 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 SNX19Q92543 992 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 SGCDQ92629 289 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 HPS1Q92902 700 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 TMEM159Q96B96 161 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 ECHDC3Q96DC8 303 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 NUS1Q96E22 293 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 HIST1H2AHQ96KK5 128 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 FAM129BQ96TA1 746 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 HIST1H2AJQ99878 128 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 H2AFJQ9BTM1 129 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 MKRN2Q9H000 416 aaKnown RBP11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 SPAG4Q9NPE6 437 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 POLE4Q9NR33 117 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 PCDHB1Q9Y5F3 818 aa11.45□□□□□ -0.58
TNFAIP1-201ENST00000226225 LRRC14BA6NHZ5 514 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 KATNA1O75449 491 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 SERPINB7O75635 380 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 IPO13O94829 963 aaKnown RBP11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 GSTT2P0CG29 244 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 GSTT2BP0CG30 244 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 MAGP20916 626 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 DGKAP23743 735 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 P2RY2P41231 377 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 GSTM4Q03013 218 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 TRPC4APQ8TEL6 797 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 FAM3CQ92520 227 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 BORCS5Q969J3 196 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 MSLNLQ96KJ4 702 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 DRC3Q9H069 523 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 KLHL25Q9H0H3 589 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 FANCEQ9HB96 536 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 FZD3Q9NPG1 666 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 WWOXQ9NZC7 414 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 RIMKLBQ9ULI2 386 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 LSM1O15116 133 aaKnown RBP11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 POLD2P49005 469 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 DNASE1L3Q13609 305 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 SPIDRQ14159 915 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 GAB4Q2WGN9 574 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZBED5Q49AG3 693 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZNF776Q68DI1 518 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZYG11AQ6WRX3 759 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 LSMEM2Q8N112 164 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 AFAP1L2Q8N4X5 818 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZBTB2Q8N680 514 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 DNAJB14Q8TBM8 379 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 TBC1D15Q8TC07 691 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 PTERQ96BW5 349 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 BIRC8Q96P09 236 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 LTB4R2Q9NPC1 389 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 ZNHIT2Q9UHR6 403 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 CROTQ9UKG9 612 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 NCKAP1Q9Y2A7 1128 aa11.44□□□□□ -0.58
TNFAIP1-201ENST00000226225 H3BMM5 538 aa11.43□□□□□ -0.58
TNFAIP1-201ENST00000226225 FDXRP22570 491 aa11.43□□□□□ -0.58
TNFAIP1-201ENST00000226225 ITGB7P26010 798 aa11.43□□□□□ -0.58
TNFAIP1-201ENST00000226225 OXTRP30559 389 aa11.43□□□□□ -0.58
TNFAIP1-201ENST00000226225 RCVRNP35243 200 aa11.43□□□□□ -0.58
TNFAIP1-201ENST00000226225 TYSND1Q2T9J0 566 aa11.43□□□□□ -0.58
TNFAIP1-201ENST00000226225 CTSL3PQ5NE16 218 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms