RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PRAMEF4O60810 478 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 JUPP14923 745 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 PSMC3P17980 439 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 GRM2Q14416 872 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 USP39Q53GS9 565 aaKnown RBP28.89■■■□□ 2.22
PABPN1-201ENST00000216727 PRAMEF9Q5VWM5 478 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 MTFMTQ96DP5 389 aaKnown RBP28.89■■■□□ 2.22
PABPN1-201ENST00000216727 CHFRQ96EP1 664 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 UHRF1Q96T88 793 aaPredicted RBP28.89■■■□□ 2.22
PABPN1-201ENST00000216727 EFHD1Q9BUP0 239 aa28.89■■■□□ 2.22
PABPN1-201ENST00000216727 INTS7Q9NVH2 962 aaKnown RBP28.89■■■□□ 2.22
PABPN1-201ENST00000216727 STOX2Q9P2F5 926 aaPredicted RBP28.89■■■□□ 2.22
PABPN1-201ENST00000216727 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.89■■■□□ 2.21
PABPN1-201ENST00000216727 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.89■■■□□ 2.21
PABPN1-201ENST00000216727 P2RY2P41231 377 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 GRIA2P42262 883 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 GSK3BP49841 420 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 CCR3P51677 355 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 PCDH1Q08174 1060 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 FBXO15Q8NCQ5 510 aaPredicted RBP28.89■■■□□ 2.21
PABPN1-201ENST00000216727 ICA1LQ8NDH6 482 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 LINC00615Q96LM1 132 aaPredicted RBP28.89■■■□□ 2.21
PABPN1-201ENST00000216727 DPY30Q9C005 99 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 OR2AG1Q9H205 316 aa28.89■■■□□ 2.21
PABPN1-201ENST00000216727 UQCRBP14927 111 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 GRIA3P42263 894 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 LIPEQ05469 1076 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 CHIT1Q13231 466 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 RAB30Q15771 203 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 FAM46CQ5VWP2 391 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 FRG2Q64ET8 278 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 AGTRAPQ6RW13 159 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 THOC6Q86W42 341 aaKnown RBP28.88■■■□□ 2.21
PABPN1-201ENST00000216727 CXorf40AQ8TE69 158 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 GATA6Q92908 595 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 FRG2BQ96QU4 278 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 ARMC1Q9NVT9 282 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 FADS3Q9Y5Q0 445 aa28.88■■■□□ 2.21
PABPN1-201ENST00000216727 H3BM21 787 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 NPC1O15118 1278 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 IL6P05231 212 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 BCKDHAP12694 445 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 PDHA2P29803 388 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 DGKQP52824 942 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 PWP1Q13610 501 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 SUSD1Q6UWL2 747 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 TRIM74Q86UV6 250 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 FAM9CQ8IZT9 166 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 SLC13A3Q8WWT9 602 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 CMTM7Q96FZ5 175 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 CLMPQ9H6B4 373 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 SLC28A3Q9HAS3 691 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 TMED5Q9Y3A6 229 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 LINC01565O15544 149 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 ACPPP15309 386 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 HALP42357 657 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 HYAL1Q12794 435 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 FXNQ16595 210 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 AAK1Q2M2I8 961 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 EGFLAMQ63HQ2 1017 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 ELSPBP1Q96BH3 223 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 MYADMQ96S97 322 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 GPR34Q9UPC5 381 aa28.87■■■□□ 2.21
PABPN1-201ENST00000216727 C17orf113A0A1B0GUU1 675 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 PRPS2P11908 318 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 PBLDP30039 288 aaPredicted RBP28.86■■■□□ 2.21
PABPN1-201ENST00000216727 IRF8Q02556 426 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 CNTN1Q12860 1018 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 GTF2H3Q13889 308 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 TRAPPC5Q8IUR0 188 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 OR56A3Q8NH54 315 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 KCTD14Q9BQ13 255 aaPredicted RBP28.86■■■□□ 2.21
PABPN1-201ENST00000216727 TRIM8Q9BZR9 551 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 ATXN10Q9UBB4 475 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 EGFL7Q9UHF1 273 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 CNOT11Q9UKZ1 510 aaKnown RBP28.86■■■□□ 2.21
PABPN1-201ENST00000216727 ARPC2O15144 300 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 VEGFDO43915 354 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 BDKRB1P46663 353 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 NEK2P51955 445 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 PLOD1Q02809 727 aaPredicted RBP28.86■■■□□ 2.21
PABPN1-201ENST00000216727 CCSMST1Q4G0I0 132 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 SLC44A4Q53GD3 710 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 PIP5KL1Q5T9C9 394 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 NUDT18Q6ZVK8 323 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 PKP4Q99569 1192 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 CGREF1Q99674 301 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 CCM2LQ9NUG4 571 aaPredicted RBP28.86■■■□□ 2.21
PABPN1-201ENST00000216727 SNX13Q9Y5W8 968 aa28.86■■■□□ 2.21
PABPN1-201ENST00000216727 IMPA1P29218 277 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 NAE1Q13564 534 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 ENPP2Q13822 863 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 INPP5AQ14642 412 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 CFAP206Q8IYR0 622 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 NUDT8Q8WV74 236 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 FOXJ1Q92949 421 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 TMEM74Q96NL1 305 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 ZDHHC4Q9NPG8 344 aa28.85■■■□□ 2.21
PABPN1-201ENST00000216727 ANTXRLA6NF34 631 aa28.84■■■□□ 2.21
PABPN1-201ENST00000216727 SLC16A8O95907 504 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms