RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZDHHC5Q9C0B5 715 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ACTR8Q9H981 624 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 POLMQ9NP87 494 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PFDN4Q9NQP4 134 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DNAJC11Q9NVH1 559 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 C2orf42Q9NWW7 574 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 USP36Q9P275 1121 aaKnown RBP19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 FFAR3O14843 346 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 GPR42O15529 346 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CLDN9O95484 217 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 LBPP18428 481 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DGKEP52429 567 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PTK2BQ14289 1009 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 C6orf163Q5TEZ5 329 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 OGFOD2Q6N063 350 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SYT13Q7L8C5 426 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CHST15Q7LFX5 561 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SNX32Q86XE0 403 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SNX31Q8N9S9 440 aa19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 RP9Q8TA86 221 aaKnown RBP19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ARHGEF17Q96PE2 2063 aaPredicted RBP19.13■□□□□ 0.65
TNFRSF1A-201ENST00000162749 LRRC72A6NJI9 287 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 NVLO15381 856 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 THRAP10827 490 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ATP6V1C1P21283 382 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PRKCQQ04759 706 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 NAE1Q13564 534 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CUL3Q13618 768 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 GAS6Q14393 721 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CMPK2Q5EBM0 449 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 GPR153Q6NV75 609 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DEFB107AQ8IZN7 70 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DENND6BQ8NEG7 585 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 LMAN1LQ9HAT1 526 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 MRPL40Q9NQ50 206 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PSMD13Q9UNM6 376 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 GOLGA4Q13439 2230 aaKnown RBP19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CHURC1-FNTBB4DL54 471 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CLDN2P57739 230 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PGBD3Q8N328 593 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PPFIBP2Q8ND30 876 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ZNF480Q8WV37 535 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CXorf56Q9H5V9 222 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SGK2Q9HBY8 427 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 KLQ9UEF7 1012 aa19.12■□□□□ 0.65
TNFRSF1A-201ENST00000162749 KRBA1A5PL33 1030 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 KLHL33A6NCF5 533 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 H0Y8X5 98 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PSMD12O00232 456 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CACNB4O00305 520 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PRAMEF4O60810 478 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PDE5AO76074 875 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ACP5P13686 325 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ATP4BP51164 291 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 FZD5Q13467 585 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CYLC2Q14093 348 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 FASTKQ14296 549 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 HERC3Q15034 1050 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PUS10Q3MIT2 529 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 GGTA1PQ4G0N0 100 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PRAMEF9Q5VWM5 478 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ANO7Q6IWH7 933 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 UNC5DQ6UXZ4 953 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 THOC6Q86W42 341 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SYNPOQ8N3V7 929 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 OR9I1Q8NGQ6 314 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 OR56A3Q8NH54 315 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 MED8Q96G25 268 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 UHRF1Q96T88 793 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 RTKNQ9BST9 563 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 RMI1Q9H9A7 625 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 FARSBQ9NSD9 589 aaKnown RBP19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 RIC8BQ9NVN3 520 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CCDC167Q9P0B6 97 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ASF1AQ9Y294 204 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CA5BQ9Y2D0 317 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 LRP4O75096 1905 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 HEATR5BQ9P2D3 2071 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 FANCMQ8IYD8 2048 aa19.11■□□□□ 0.65
TNFRSF1A-201ENST00000162749 C10orf142B7Z368 130 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SEMA4FO95754 770 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ANPEPP15144 967 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ACADSP16219 412 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 RPL10P27635 214 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DMPKQ09013 629 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 CPSF6Q16630 551 aaKnown RBP eCLIP19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 C6orf136Q5SQH8 315 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 KLHDC8AQ8IYD2 350 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 EFCAB3Q8N7B9 438 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 OR4K3Q96R72 315 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 FGF22Q9HCT0 170 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 SUFUQ9UMX1 484 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 LATO43561 262 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ULK1O75385 1050 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 IGLV3-19P01714 112 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 HNRNPA2B1P22626 353 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 DIO3P55073 304 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 MUM1Q2TAK8 710 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 ATP6AP1LQ52LC2 224 aa19.1■□□□□ 0.65
TNFRSF1A-201ENST00000162749 PYCR3Q53H96 274 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms