RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Plxna1P70206 1894 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Hoxb13P70321 286 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Atp5jP97450 108 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Nr4a2Q06219 598 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Fam171bQ14CH0 825 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Pitpnm3Q3UHE1 974 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Wfdc8Q4KUS1 273 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Dcdc2Q5DU00 475 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 TefmQ5SSK3 364 aaKnown RBP6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Nr2f1Q60632 422 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Kcnj11Q61743 390 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ccdc66Q6NS45 935 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Zbtb5Q7TQG0 670 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Olfr859Q7TRF5 309 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 QpctlQ8BH73 383 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 R3hcc1Q8BSI6 488 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Q8BWQ6 963 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 MastlQ8C0P0 865 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 VcpkmtQ8C436 228 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ccdc134Q8C7V8 229 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Otud6bQ8K2H2 294 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Lrrc10Q8K3W2 274 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tbc1d13Q8R3D1 400 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Olfr130Q8VFC1 317 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Trpv6Q91WD2 767 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Slc25a38Q91XD8 326 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 AspnQ99MQ4 373 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 MutyhQ99P21 515 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Arl4dQ99PE9 201 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Vps33aQ9D2N9 598 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 NapaQ9DB05 295 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Trpv4Q9EPK8 871 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Erap1Q9EQH2 930 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tmod3Q9JHJ0 352 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Epb41l4bQ9JMC8 527 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ehd3Q9QXY6 535 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tbk1Q9WUN2 729 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Loxl3Q9Z175 754 aa6.8□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Taf1Q80UV9 1891 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Baz2aQ91YE5 1889 aaKnown RBP6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Scgb1b24B1B0N6 92 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 R3hdm1E9Q9Q2 1135 aaKnown RBP6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 2610008E11RikG3X964 669 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Gm12794L7MTS5 483 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ptpn9O35239 593 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 NsmafO35242 920 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Hnrnph1O35737 449 aaKnown RBP6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 PrkceP16054 737 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 PlgP20918 812 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 PklrP53657 574 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 DmwdQ08274 665 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 MamstrQ0ZCJ7 421 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Col28a1Q2UY11 1141 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Xkr5Q5GH66 676 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Gm12258Q5NC63 627 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Sox17Q61473 419 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tgoln2Q62314 363 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Npepl1Q6NSR8 524 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Bend6Q6PFX2 281 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tlr12Q6QNU9 906 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 C6.1alQ7M757 291 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Gm5622Q810Q0 167 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Slc17a8Q8BFU8 601 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ano1Q8BHY3 960 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Fbxo30Q8BJL1 746 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 PcgF3Q8BTQ0 241 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Cmtr2Q8BWQ4 767 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Kcnv1Q8BZN2 503 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 ExogQ8C163 368 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Nemp2Q8CB65 421 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tspyl4Q8VD63 406 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Olfr397Q8VEZ6 315 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Akirin1Q99LF1 191 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Il20Q9JKV9 176 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 StrapQ9Z1Z2 350 aaKnown RBP6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Gfpt2Q9Z2Z9 682 aa6.79□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ktn1Q61595 1327 aaKnown RBP6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Igkv4-90A0A075B5L3 117 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Znf551B2RUI1 696 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ccnyl1D3YUJ3 367 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Zfp213E9QAW0 468 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Capn2O08529 700 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Serpinb9eO08806 377 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Emilin3P59900 758 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Psmc5P62196 406 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 CiitaP79621 1155 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Glycam1Q02596 151 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Hvcn1Q3U2S8 269 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Ccdc177Q3UHB8 706 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Wdr20Q3UWE6 569 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Adad1Q5SUE7 619 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 P4ha1Q60715 534 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Actn1Q7TPR4 892 aaKnown RBP6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Rbbp8Q80YR6 893 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Oscp1Q8BHW2 379 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Sh2d7Q8BI17 458 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Adipor2Q8BQS5 386 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Tmtc3Q8BRH0 920 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 PisdQ8BSF4 406 aa6.78□□□□□ -1.32
Ccdc54-201ENSMUST00000062439 Sec62Q8BU14 398 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms