RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Mthfd1lQ3V3R1 977 aaKnown RBP18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Pik3c3Q6PF93 887 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Tas2r104Q7M723 302 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Mrps17Q9CQE3 120 aaKnown RBP18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Aar2Q9D2V5 384 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Bpifa3Q9D9J8 232 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 TsaccQ9DA44 124 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ndst3Q9EQH7 873 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Phf11cB4XVP9 339 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Fpr-rs6Q3SXG2 339 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Xkr4Q5GH67 647 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Cdh12Q5RJH3 794 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Tyw1Q8BJM7 721 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Gpr61Q8C010 449 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Il17rdQ8JZL1 738 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Pcdhb8Q91XZ2 779 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Fam118aQ91YN1 357 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ncbp2Q9CQ49 156 aaKnown RBP18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Cep97Q9CZ62 856 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Chrac1Q9JKP8 129 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Peak1Q69Z38 1735 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Arhgap40E9Q6X9 672 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Olfr319L7MTY4 306 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Rhox5P52651 210 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Lrrtm4Q80XG9 590 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Creb3l4Q9D2A5 370 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 RhouQ9EQT3 261 aa18.01■□□□□ 0.47
Scaf11-201ENSMUST00000047835 StradaQ3UUJ4 431 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Mtmr11Q3V1L6 700 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Sim1Q61045 765 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 PeloQ80X73 385 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Zfp940Q8R2Q3 566 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Olfr1310Q8VF85 312 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 CrygnQ8VHL5 183 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Adgrl4Q923X1 739 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Hsd3b7Q9EQC1 369 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Rfc2Q9WUK4 349 aaKnown RBP18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Srp54P14576 504 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 GhrP16882 650 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Gm5416Q6IE28 97 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Olfr17Q7TRM9 315 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Jazf1Q80ZQ5 243 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Hbp1Q8R316 516 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Uts2rQ8VIH9 385 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ift27Q9D0P8 186 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Capns2Q9D7J7 247 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Gm21488A0A087WR99 222 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Gm45713A0A1B0GS68 446 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Cyp2a22B2RXZ2 492 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Tgfb3P17125 410 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 PdgfaP20033 211 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ntsr2P70310 416 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Sox4Q06831 440 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Sema4aQ62178 760 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 IpmkQ7TT16 396 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Cpped1Q8BFS6 312 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Paqr5Q9DCU0 330 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ptdss2Q9Z1X2 473 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Usp51B1AY15 661 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Prrt4B2RU40 902 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 OcmP51879 109 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Aqp4P55088 323 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Htr4P97288 388 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Scn1bP97952 218 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Scube1Q6NZL8 1018 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Mgat5bQ765H6 792 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Psd4Q8BLR5 1005 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Panx3Q8CEG0 392 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Spp2Q8K1I3 203 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Defb36Q8K3U4 67 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Fibcd1A2AV25 459 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Il20rbE9Q9A6 308 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Zmat1Q3V0C1 714 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Arcn1Q5XJY5 511 aaKnown RBP18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Pex26Q8BGI5 305 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Dnase1l2Q9D1G0 278 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Efhc1Q9D9T8 648 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ubqln2Q9QZM0 638 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Lbx2Q9WUN8 195 aa18■□□□□ 0.47
Scaf11-201ENSMUST00000047835 JhyE9Q793 770 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Btbd1P58544 488 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Gnb5P62881 395 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Il18r1Q61098 537 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Las2Q8CB14 526 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Rab14Q91V41 215 aaKnown RBP17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Q9CWU4 180 aaKnown RBP17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Fabp12Q9DAK4 132 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 ZxdbA2CE44 873 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Guf1Q8C3X4 651 aaKnown RBP17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Treml1Q8K558 317 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Smap1Q91VZ6 440 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Fam192aQ91WE2 254 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Olfr705Q9EPF7 316 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Herpud2Q9JJC9 404 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Chrna10B2RX82 447 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ppp3cbP48453 525 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Ccr3P51678 359 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 HrQ61645 1182 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Dlx3Q64205 287 aa17.99■□□□□ 0.47
Scaf11-201ENSMUST00000047835 Hfe2Q7TQ32 420 aa17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms