RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI2	YOL117W	BRE4	Q07660	1125 aa		4.27	□□□□□ -1.73
RRI2	YOL117W	SRO9	P25567	434 aa	Known RBP	4.26	□□□□□ -1.73
RRI2	YOL117W	NOP7	P53261	605 aa	Known RBP	4.26	□□□□□ -1.73
RRI2	YOL117W	SDH1	Q00711	640 aa		4.26	□□□□□ -1.73
RRI2	YOL117W	HOS3	Q02959	697 aa	Known RBP	4.26	□□□□□ -1.73
RRI2	YOL117W	LPX1	Q12405	387 aa	Known RBP	4.26	□□□□□ -1.73
RRI2	YOL117W	SPO21	Q12411	609 aa		4.26	□□□□□ -1.73
RRI2	YOL117W	MDL2	P33311	773 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	OMA1	P36163	345 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	YHL012W	P38709	493 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	VAC8	P39968	578 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	HNT2	P49775	206 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	SSY1	Q03770	852 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	YLR225C	Q05948	407 aa	Known RBP	4.25	□□□□□ -1.73
RRI2	YOL117W	ESC2	Q06340	456 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	OPI10	Q08202	246 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	GNT1	Q12096	491 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	DBP2	P24783	546 aa	Known RBP	4.25	□□□□□ -1.73
RRI2	YOL117W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
RRI2	YOL117W	YKL069W	P36088	180 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	YFL054C	P43549	646 aa		4.25	□□□□□ -1.73
RRI2	YOL117W	INO1	P11986	533 aa		4.24	□□□□□ -1.73
RRI2	YOL117W	PNT1	P38969	423 aa		4.24	□□□□□ -1.73
RRI2	YOL117W	SIP5	P40210	489 aa	Known RBP	4.24	□□□□□ -1.73
RRI2	YOL117W	RKM4	Q12504	494 aa		4.24	□□□□□ -1.73
RRI2	YOL117W	ADP1	P25371	1049 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	AGP1	P25376	633 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	PRO1	P32264	428 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	MOT2	P34909	587 aa	Known RBP	4.23	□□□□□ -1.73
RRI2	YOL117W	PTC7	P38797	343 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	TAT2	P38967	592 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	TNA1	P53322	534 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	CWC24	P53769	259 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	RSC58	Q07979	502 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	PIK1	P39104	1066 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	SPO20	Q04359	397 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	NSI1	Q12457	570 aa		4.23	□□□□□ -1.73
RRI2	YOL117W	RPL11A	P0C0W9	174 aa	Known RBP	4.22	□□□□□ -1.73
RRI2	YOL117W	ABD1	P32783	436 aa	Predicted RBP	4.22	□□□□□ -1.73
RRI2	YOL117W	MCM7	P38132	845 aa		4.22	□□□□□ -1.73
RRI2	YOL117W	MXR1	P40029	184 aa		4.22	□□□□□ -1.73
RRI2	YOL117W	GTS1	P40956	396 aa		4.22	□□□□□ -1.73
RRI2	YOL117W	YGL176C	P46945	554 aa		4.22	□□□□□ -1.73
RRI2	YOL117W	SSF2	Q12153	453 aa	Predicted RBP	4.22	□□□□□ -1.73
RRI2	YOL117W	RPL11B	Q3E757	174 aa	Predicted RBP	4.22	□□□□□ -1.73
RRI2	YOL117W	BAS1	P22035	811 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	SBA1	P28707	216 aa	Known RBP	4.21	□□□□□ -1.74
RRI2	YOL117W	HSP78	P33416	811 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	ABZ1	P37254	787 aa	Predicted RBP	4.21	□□□□□ -1.74
RRI2	YOL117W	SPF1	P39986	1215 aa	Known RBP	4.21	□□□□□ -1.74
RRI2	YOL117W	SHE9	Q04172	456 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	COQ4	O13525	335 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	PRI2	P20457	528 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	LIP5	P32875	414 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	SLA2	P33338	968 aa		4.21	□□□□□ -1.74
RRI2	YOL117W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RRI2	YOL117W	FAL1	Q12099	399 aa	Known RBP	4.21	□□□□□ -1.74
RRI2	YOL117W	YKL107W	P34251	309 aa		4.2	□□□□□ -1.74
RRI2	YOL117W	MAC1	P35192	417 aa		4.2	□□□□□ -1.74
RRI2	YOL117W	LRG1	P35688	1017 aa		4.2	□□□□□ -1.74
RRI2	YOL117W	VBA5	P36172	582 aa		4.2	□□□□□ -1.74
RRI2	YOL117W	STE5	P32917	917 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	GEM1	P39722	662 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	ATG13	Q06628	738 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	YKL151C	P36059	337 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	CCZ1	P38273	704 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	MTC3	P53077	123 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	ACM1	Q08981	209 aa		4.19	□□□□□ -1.74
RRI2	YOL117W	MBP1	P39678	833 aa		4.18	□□□□□ -1.74
RRI2	YOL117W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RRI2	YOL117W	SPP382	Q06411	708 aa	Predicted RBP	4.18	□□□□□ -1.74
RRI2	YOL117W	YDL177C	Q12257	170 aa		4.18	□□□□□ -1.74
RRI2	YOL117W	DFG16	Q99234	619 aa		4.18	□□□□□ -1.74
RRI2	YOL117W	GRX1	P25373	110 aa	Known RBP	4.17	□□□□□ -1.74
RRI2	YOL117W	AIM26	P32858	118 aa		4.17	□□□□□ -1.74
RRI2	YOL117W	UGA2	P38067	497 aa		4.17	□□□□□ -1.74
RRI2	YOL117W	NBA1	Q08229	501 aa	Known RBP	4.17	□□□□□ -1.74
RRI2	YOL117W	TSA1	P34760	196 aa	Known RBP	4.17	□□□□□ -1.74
RRI2	YOL117W	SEC26	P41810	973 aa	Known RBP	4.17	□□□□□ -1.74
RRI2	YOL117W	KRI1	P42846	591 aa	Known RBP	4.17	□□□□□ -1.74
RRI2	YOL117W	TDA5	Q06417	326 aa	Known RBP	4.17	□□□□□ -1.74
RRI2	YOL117W	BI4	P03879	638 aa		4.16	□□□□□ -1.74
RRI2	YOL117W	ACE2	P21192	770 aa		4.16	□□□□□ -1.74
RRI2	YOL117W	MRP8	P35719	219 aa		4.16	□□□□□ -1.74
RRI2	YOL117W	POL12	P38121	705 aa	Predicted RBP	4.16	□□□□□ -1.74
RRI2	YOL117W	PFD1	P46988	109 aa		4.16	□□□□□ -1.74
RRI2	YOL117W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RRI2	YOL117W	WRS1	Q12109	432 aa	Known RBP	4.16	□□□□□ -1.74
RRI2	YOL117W	RIB2	Q12362	591 aa	Known RBP	4.16	□□□□□ -1.74
RRI2	YOL117W	SPS1	P08458	490 aa		4.15	□□□□□ -1.74
RRI2	YOL117W	IRR1	P40541	1150 aa		4.15	□□□□□ -1.74
RRI2	YOL117W	ECL1	P48235	211 aa		4.15	□□□□□ -1.74
RRI2	YOL117W	HRQ1	Q05549	1077 aa		4.15	□□□□□ -1.74
RRI2	YOL117W	SRM1	P21827	482 aa		4.15	□□□□□ -1.75
RRI2	YOL117W	SEG2	P34250	1132 aa		4.15	□□□□□ -1.75
RRI2	YOL117W	PBY1	P38254	753 aa		4.15	□□□□□ -1.75
RRI2	YOL117W	YBR184W	P38299	523 aa		4.15	□□□□□ -1.75
RRI2	YOL117W	SNF7	P39929	240 aa	Known RBP	4.15	□□□□□ -1.75
RRI2	YOL117W	RSB1	Q08417	382 aa		4.15	□□□□□ -1.75
RRI2	YOL117W	OCA5	P38738	679 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms