RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	MDJ2	P42834	146 aa		3.65	□□□□□ -1.83
LYS9	YNR050C	SAM37	P50110	327 aa		3.65	□□□□□ -1.83
LYS9	YNR050C	PRP40	P33203	583 aa	Known RBP	3.64	□□□□□ -1.83
LYS9	YNR050C	ATG14	P38270	344 aa		3.64	□□□□□ -1.83
LYS9	YNR050C	MSS4	P38994	779 aa		3.64	□□□□□ -1.83
LYS9	YNR050C	YLR224W	Q05947	369 aa		3.64	□□□□□ -1.83
LYS9	YNR050C	RSB1	Q08417	382 aa		3.64	□□□□□ -1.83
LYS9	YNR050C	CIC1	P38779	376 aa	Known RBP	3.63	□□□□□ -1.83
LYS9	YNR050C	YGL140C	P53120	1219 aa		3.63	□□□□□ -1.83
LYS9	YNR050C	ULP1	Q02724	621 aa		3.63	□□□□□ -1.83
LYS9	YNR050C	YAP6	Q03935	383 aa		3.63	□□□□□ -1.83
LYS9	YNR050C	RSM24	Q03976	319 aa		3.63	□□□□□ -1.83
LYS9	YNR050C	NUT2	Q06213	157 aa		3.63	□□□□□ -1.83
LYS9	YNR050C	RPN3	P40016	523 aa	Known RBP	3.62	□□□□□ -1.83
LYS9	YNR050C	YFL054C	P43549	646 aa		3.62	□□□□□ -1.83
LYS9	YNR050C	RSM26	P47141	266 aa		3.62	□□□□□ -1.83
LYS9	YNR050C	URN1	Q06525	465 aa	Known RBP	3.62	□□□□□ -1.83
LYS9	YNR050C	PPM2	Q08282	695 aa		3.62	□□□□□ -1.83
LYS9	YNR050C	RLF2	Q12495	606 aa		3.62	□□□□□ -1.83
LYS9	YNR050C	GRS1	P38088	690 aa	Known RBP	3.61	□□□□□ -1.83
LYS9	YNR050C	HMI1	Q12039	706 aa		3.61	□□□□□ -1.83
LYS9	YNR050C	PTC5	Q12511	572 aa		3.61	□□□□□ -1.83
LYS9	YNR050C	SPA2	P23201	1466 aa	Known RBP	3.6	□□□□□ -1.83
LYS9	YNR050C	EMC1	P25574	760 aa		3.6	□□□□□ -1.83
LYS9	YNR050C	RFC5	P38251	354 aa		3.6	□□□□□ -1.83
LYS9	YNR050C	ERP5	P38819	212 aa		3.6	□□□□□ -1.83
LYS9	YNR050C	DAK2	P43550	591 aa		3.6	□□□□□ -1.83
LYS9	YNR050C	PBP1	P53297	722 aa	Known RBP	3.6	□□□□□ -1.83
LYS9	YNR050C	EST2	Q06163	884 aa		3.6	□□□□□ -1.83
LYS9	YNR050C	TOS4	Q06266	489 aa		3.6	□□□□□ -1.83
LYS9	YNR050C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.6	□□□□□ -1.83	not detected
LYS9	YNR050C	SEC23	P15303	768 aa	Known RBP	3.59	□□□□□ -1.83
LYS9	YNR050C	SQT1	P35184	431 aa		3.59	□□□□□ -1.83
LYS9	YNR050C	OAR1	P35731	278 aa		3.59	□□□□□ -1.83
LYS9	YNR050C	ALG3	P38179	458 aa		3.59	□□□□□ -1.83
LYS9	YNR050C	SIP5	P40210	489 aa	Known RBP	3.59	□□□□□ -1.83
LYS9	YNR050C	SIZ1	Q04195	904 aa		3.59	□□□□□ -1.83
LYS9	YNR050C	DAL4	Q04895	635 aa		3.59	□□□□□ -1.83
LYS9	YNR050C	KAR2	P16474	682 aa	Known RBP	3.58	□□□□□ -1.84
LYS9	YNR050C	MOH1	P38191	138 aa		3.58	□□□□□ -1.84
LYS9	YNR050C	GCV2	P49095	1034 aa		3.58	□□□□□ -1.84
LYS9	YNR050C	SWR1	Q05471	1514 aa		3.57	□□□□□ -1.84
LYS9	YNR050C	GTF1	P53260	183 aa	Predicted RBP	3.57	□□□□□ -1.84
LYS9	YNR050C	YPL109C	Q02981	657 aa		3.57	□□□□□ -1.84
LYS9	YNR050C	ADI1	Q03677	179 aa		3.57	□□□□□ -1.84
LYS9	YNR050C	NOP12	Q08208	459 aa	Known RBP	3.57	□□□□□ -1.84
LYS9	YNR050C	YPL260W	Q08977	551 aa		3.57	□□□□□ -1.84
LYS9	YNR050C	PLB1	P39105	664 aa		3.56	□□□□□ -1.84
LYS9	YNR050C	RPL34A	P87262	121 aa	Predicted RBP	3.56	□□□□□ -1.84
LYS9	YNR050C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
LYS9	YNR050C	SVS1	Q12254	260 aa		3.56	□□□□□ -1.84
LYS9	YNR050C	PHO4	P07270	312 aa	Known RBP	3.55	□□□□□ -1.84
LYS9	YNR050C	KIN2	P13186	1147 aa	Known RBP	3.55	□□□□□ -1.84
LYS9	YNR050C	APL1	P27351	700 aa		3.55	□□□□□ -1.84
LYS9	YNR050C	VPS35	P34110	944 aa		3.55	□□□□□ -1.84
LYS9	YNR050C	PIC2	P40035	300 aa		3.54	□□□□□ -1.84
LYS9	YNR050C	MSC2	Q03455	724 aa		3.54	□□□□□ -1.84
LYS9	YNR050C	ATG13	Q06628	738 aa		3.54	□□□□□ -1.84
LYS9	YNR050C	YBL113C	Q7M4S9	792 aa		3.54	□□□□□ -1.84
LYS9	YNR050C	EXG2	P52911	562 aa		3.53	□□□□□ -1.84
LYS9	YNR050C	HRR25	P29295	494 aa	Known RBP	3.52	□□□□□ -1.85
LYS9	YNR050C	ATF1	P40353	525 aa		3.52	□□□□□ -1.85
LYS9	YNR050C	SNM1	P40993	198 aa		3.52	□□□□□ -1.85
LYS9	YNR050C	RAT1	Q02792	1006 aa	Known RBP	3.52	□□□□□ -1.85
LYS9	YNR050C	DED1	P06634	604 aa	Known RBP	3.51	□□□□□ -1.85
LYS9	YNR050C	YER152C	P10356	443 aa		3.51	□□□□□ -1.85
LYS9	YNR050C	BDF2	Q07442	638 aa		3.51	□□□□□ -1.85
LYS9	YNR050C	ADY3	Q07732	790 aa		3.51	□□□□□ -1.85
LYS9	YNR050C	TPO1	Q07824	586 aa		3.51	□□□□□ -1.85
LYS9	YNR050C	FAA3	P39002	694 aa		3.5	□□□□□ -1.85
LYS9	YNR050C	UBA2	P52488	636 aa		3.5	□□□□□ -1.85
LYS9	YNR050C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
LYS9	YNR050C	GCD6	P32501	712 aa	Known RBP	3.49	□□□□□ -1.85
LYS9	YNR050C	PEP7	P32609	515 aa		3.49	□□□□□ -1.85
LYS9	YNR050C	MND2	P40577	368 aa		3.49	□□□□□ -1.85
LYS9	YNR050C	CHA4	P43634	648 aa		3.49	□□□□□ -1.85
LYS9	YNR050C	MET12	P46151	657 aa		3.49	□□□□□ -1.85
LYS9	YNR050C	ROD1	Q02805	837 aa		3.49	□□□□□ -1.85
LYS9	YNR050C	HXK1	P04806	485 aa	Known RBP	3.48	□□□□□ -1.85
LYS9	YNR050C	ACE2	P21192	770 aa		3.48	□□□□□ -1.85
LYS9	YNR050C	MKK2	P32491	506 aa		3.48	□□□□□ -1.85
LYS9	YNR050C	QRI1	P43123	477 aa	Known RBP	3.48	□□□□□ -1.85
LYS9	YNR050C	IOC3	P43596	787 aa		3.48	□□□□□ -1.85
LYS9	YNR050C	AIM39	Q08223	395 aa		3.48	□□□□□ -1.85
LYS9	YNR050C	LAS17	Q12446	633 aa		3.48	□□□□□ -1.85
LYS9	YNR050C	HIS5	P07172	385 aa		3.47	□□□□□ -1.85
LYS9	YNR050C	TAF13	P11747	167 aa		3.47	□□□□□ -1.85
LYS9	YNR050C	PFK1	P16861	987 aa	Known RBP	3.47	□□□□□ -1.85
LYS9	YNR050C	RGD1	P38339	666 aa		3.47	□□□□□ -1.85
LYS9	YNR050C	KCS1	Q12494	1050 aa		3.47	□□□□□ -1.85
LYS9	YNR050C	MET4	P32389	672 aa		3.46	□□□□□ -1.85
LYS9	YNR050C	CDC3	P32457	520 aa	Known RBP	3.46	□□□□□ -1.85
LYS9	YNR050C	HXT13	P39924	564 aa		3.46	□□□□□ -1.85
LYS9	YNR050C	BUL1	P48524	976 aa		3.46	□□□□□ -1.85
LYS9	YNR050C	HXT17	P53631	564 aa		3.46	□□□□□ -1.85
LYS9	YNR050C	HXT15	P54854	567 aa		3.46	□□□□□ -1.85
LYS9	YNR050C	TMN2	Q04562	672 aa		3.46	□□□□□ -1.85
LYS9	YNR050C	MLS1	P30952	554 aa		3.45	□□□□□ -1.86
LYS9	YNR050C	SIW14	P53965	281 aa		3.45	□□□□□ -1.86
LYS9	YNR050C	LGE1	Q02796	332 aa	Known RBP	3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms