RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C KAR1P11927 433 aa3.83□□□□□ -1.8
SSN8YNL025C YKL091CP33324 310 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C ATG14P38270 344 aa3.83□□□□□ -1.8
SSN8YNL025C QNS1P38795 714 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C NOC2P39744 710 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C YFR016CP43597 1233 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C OYE2Q03558 400 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C GSF2Q04697 403 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C RRP15Q06511 250 aaPredicted RBP3.83□□□□□ -1.8
SSN8YNL025C BRE1Q07457 700 aaKnown RBP3.83□□□□□ -1.8
SSN8YNL025C TAF13P11747 167 aa3.82□□□□□ -1.8
SSN8YNL025C SEC8P32855 1065 aa3.82□□□□□ -1.8
SSN8YNL025C RPS0AP32905 252 aaKnown RBP3.82□□□□□ -1.8
SSN8YNL025C ADD66P36040 267 aa3.82□□□□□ -1.8
SSN8YNL025C AIM3P38266 947 aaKnown RBP3.82□□□□□ -1.8
SSN8YNL025C PEX28P38848 579 aa3.82□□□□□ -1.8
SSN8YNL025C PMC1P38929 1173 aaPredicted RBP3.82□□□□□ -1.8
SSN8YNL025C VPS27P40343 622 aaKnown RBP3.82□□□□□ -1.8
SSN8YNL025C THI12P42883 340 aa3.82□□□□□ -1.8
SSN8YNL025C THI5P43534 340 aa3.82□□□□□ -1.8
SSN8YNL025C RSM26P47141 266 aa3.82□□□□□ -1.8
SSN8YNL025C THI11P47183 340 aa3.82□□□□□ -1.8
SSN8YNL025C ALG12P53730 551 aa3.82□□□□□ -1.8
SSN8YNL025C SNO2P53823 222 aa3.82□□□□□ -1.8
SSN8YNL025C PEX13P80667 386 aa3.82□□□□□ -1.8
SSN8YNL025C ULP1Q02724 621 aa3.82□□□□□ -1.8
SSN8YNL025C THI13Q07748 340 aa3.82□□□□□ -1.8
SSN8YNL025C YOR131CQ12486 218 aa3.82□□□□□ -1.8
SSN8YNL025C STI1P15705 589 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SSN8YNL025C SQT1P35184 431 aa3.81□□□□□ -1.8
SSN8YNL025C ERP2P39704 215 aa3.81□□□□□ -1.8
SSN8YNL025C IES1P43579 692 aa3.81□□□□□ -1.8
SSN8YNL025C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SSN8YNL025C ADI1Q03677 179 aa3.81□□□□□ -1.8
SSN8YNL025C VMS1Q04311 632 aaKnown RBP3.81□□□□□ -1.8
SSN8YNL025C DAL4Q04895 635 aa3.81□□□□□ -1.8
SSN8YNL025C YDL121CQ07541 149 aa3.81□□□□□ -1.8
SSN8YNL025C NBA1Q08229 501 aaKnown RBP3.81□□□□□ -1.8
SSN8YNL025C OXR1Q08952 273 aa3.81□□□□□ -1.8
SSN8YNL025C HIF1Q12373 385 aa3.81□□□□□ -1.8
SSN8YNL025C YGR161W-CQ3E744 92 aa3.81□□□□□ -1.8
SSN8YNL025C RAD2P07276 1031 aa3.8□□□□□ -1.8
SSN8YNL025C SEC23P15303 768 aaKnown RBP3.8□□□□□ -1.8
SSN8YNL025C ATE1P16639 503 aa3.8□□□□□ -1.8
SSN8YNL025C GAL11P19659 1081 aa3.8□□□□□ -1.8
SSN8YNL025C MET4P32389 672 aa3.8□□□□□ -1.8
SSN8YNL025C YSC84P32793 468 aa3.8□□□□□ -1.8
SSN8YNL025C YPT53P36019 220 aa3.8□□□□□ -1.8
SSN8YNL025C GRX7P38068 203 aa3.8□□□□□ -1.8
SSN8YNL025C BAP2P38084 609 aa3.8□□□□□ -1.8
SSN8YNL025C ETP1P38748 585 aaKnown RBP3.8□□□□□ -1.8
SSN8YNL025C DAK2P43550 591 aa3.8□□□□□ -1.8
SSN8YNL025C YJL045WP47052 634 aa3.8□□□□□ -1.8
SSN8YNL025C YGL140CP53120 1219 aa3.8□□□□□ -1.8
SSN8YNL025C ESF2P53743 316 aaKnown RBP3.8□□□□□ -1.8
SSN8YNL025C YPL109CQ02981 657 aa3.8□□□□□ -1.8
SSN8YNL025C RSC58Q07979 502 aa3.8□□□□□ -1.8
SSN8YNL025C YOL057WQ08225 711 aa3.8□□□□□ -1.8
SSN8YNL025C WRS1Q12109 432 aaKnown RBP3.8□□□□□ -1.8
SSN8YNL025C RPS13P05756 151 aaKnown RBP3.79□□□□□ -1.8
SSN8YNL025C CIT2P08679 460 aa3.79□□□□□ -1.8
SSN8YNL025C CLN2P20438 545 aa3.79□□□□□ -1.8
SSN8YNL025C PWP2P25635 923 aaKnown RBP3.79□□□□□ -1.8
SSN8YNL025C MAD1P40957 749 aa3.79□□□□□ -1.8
SSN8YNL025C HNT2P49775 206 aa3.79□□□□□ -1.8
SSN8YNL025C RPN4Q03465 531 aa3.79□□□□□ -1.8
SSN8YNL025C GIR2Q03768 265 aaPredicted RBP3.79□□□□□ -1.8
SSN8YNL025C ECM16Q04217 1267 aaKnown RBP3.79□□□□□ -1.8
SSN8YNL025C YPL277CQ08989 487 aa3.79□□□□□ -1.8
SSN8YNL025C YLR358CO13565 187 aa3.78□□□□□ -1.8
SSN8YNL025C GRX4P32642 244 aa3.78□□□□□ -1.8
SSN8YNL025C UGA4P32837 571 aa3.78□□□□□ -1.8
SSN8YNL025C VAC8P39968 578 aa3.78□□□□□ -1.8
SSN8YNL025C AIM21P40563 679 aa3.78□□□□□ -1.8
SSN8YNL025C ENT3P47160 408 aa3.78□□□□□ -1.8
SSN8YNL025C EST2Q06163 884 aa3.78□□□□□ -1.8
SSN8YNL025C COQ4O13525 335 aa3.77□□□□□ -1.81
SSN8YNL025C HXK1P04806 485 aaKnown RBP3.77□□□□□ -1.81
SSN8YNL025C MET6P05694 767 aaKnown RBP3.77□□□□□ -1.81
SSN8YNL025C SPS1P08458 490 aa3.77□□□□□ -1.81
SSN8YNL025C HEM13P11353 328 aaKnown RBP3.77□□□□□ -1.81
SSN8YNL025C PRE10P21242 288 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
SSN8YNL025C AIM26P32858 118 aa3.77□□□□□ -1.81
SSN8YNL025C TOD6P34219 525 aa3.77□□□□□ -1.81
SSN8YNL025C NMD3P38861 518 aaKnown RBP3.77□□□□□ -1.81
SSN8YNL025C RPN3P40016 523 aaKnown RBP3.77□□□□□ -1.81
SSN8YNL025C YJR107WP47145 328 aa3.77□□□□□ -1.81
SSN8YNL025C RMD1Q03441 430 aa3.77□□□□□ -1.81
SSN8YNL025C NSE3Q05541 303 aa3.77□□□□□ -1.81
SSN8YNL025C NKP1Q12493 238 aa3.77□□□□□ -1.81
SSN8YNL025C KIP1P28742 1111 aa3.76□□□□□ -1.81
SSN8YNL025C AFG2P32794 780 aa3.76□□□□□ -1.81
SSN8YNL025C VPS24P36095 224 aaKnown RBP3.76□□□□□ -1.81
SSN8YNL025C CCZ1P38273 704 aa3.76□□□□□ -1.81
SSN8YNL025C PIK1P39104 1066 aa3.76□□□□□ -1.81
SSN8YNL025C SEC26P41810 973 aaKnown RBP3.76□□□□□ -1.81
SSN8YNL025C TNA1P53322 534 aa3.76□□□□□ -1.81
SSN8YNL025C YNR063WP53749 607 aa3.76□□□□□ -1.81
SSN8YNL025C HOS3Q02959 697 aaKnown RBP3.76□□□□□ -1.81
SSN8YNL025C CLU1Q03690 1277 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms