RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W SPP382Q06411 708 aaPredicted RBP1.88□□□□□ -2.11
SMC4YLR086W HRK1Q08732 759 aaKnown RBP1.88□□□□□ -2.11
SMC4YLR086W AI3P03877 415 aa1.88□□□□□ -2.11
SMC4YLR086W SNF5P18480 905 aa1.88□□□□□ -2.11
SMC4YLR086W PGM1P33401 570 aaKnown RBP1.88□□□□□ -2.11
SMC4YLR086W REI1P38344 393 aaPredicted RBP1.88□□□□□ -2.11
SMC4YLR086W UBP12P39538 1254 aa1.88□□□□□ -2.11
SMC4YLR086W IOC4Q04213 475 aa1.88□□□□□ -2.11
SMC4YLR086W OSH2Q12451 1283 aa1.88□□□□□ -2.11
SMC4YLR086W PHO8P11491 566 aa1.87□□□□□ -2.11
SMC4YLR086W INO1P11986 533 aa1.87□□□□□ -2.11
SMC4YLR086W MRC1P25588 1096 aa1.87□□□□□ -2.11
SMC4YLR086W CDC11P32458 415 aa1.87□□□□□ -2.11
SMC4YLR086W CDC12P32468 407 aaKnown RBP1.87□□□□□ -2.11
SMC4YLR086W GRX4P32642 244 aa1.87□□□□□ -2.11
SMC4YLR086W SLA2P33338 968 aa1.87□□□□□ -2.11
SMC4YLR086W YKL107WP34251 309 aa1.87□□□□□ -2.11
SMC4YLR086W TY1A-NL1Q12391 440 aaKnown RBP1.87□□□□□ -2.11
SMC4YLR086W NOP14Q99207 810 aaKnown RBP1.87□□□□□ -2.11
SMC4YLR086W TRA1P38811 3744 aa1.87□□□□□ -2.11
SMC4YLR086W PUF4P25339 888 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SMC4YLR086W PIK1P39104 1066 aa1.87□□□□□ -2.11
SMC4YLR086W NEO1P40527 1151 aa1.87□□□□□ -2.11
SMC4YLR086W ACM1Q08981 209 aa1.87□□□□□ -2.11
SMC4YLR086W ALG3P38179 458 aa1.87□□□□□ -2.11
SMC4YLR086W TIM54P47045 478 aa1.87□□□□□ -2.11
SMC4YLR086W GYP7P48365 746 aa1.87□□□□□ -2.11
SMC4YLR086W TPO2P53283 614 aa1.87□□□□□ -2.11
SMC4YLR086W SOK2P53438 785 aaPredicted RBP1.87□□□□□ -2.11
SMC4YLR086W ATP25Q03153 612 aa1.87□□□□□ -2.11
SMC4YLR086W BAS1P22035 811 aa1.86□□□□□ -2.11
SMC4YLR086W PET10P36139 283 aa1.86□□□□□ -2.11
SMC4YLR086W PGM2P37012 569 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W HUL4P40985 892 aa1.86□□□□□ -2.11
SMC4YLR086W UBP6P43593 499 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W MTC3P53077 123 aa1.86□□□□□ -2.11
SMC4YLR086W ARI1P53111 347 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W RAT1Q02792 1006 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W HBN1Q96VH4 193 aa1.86□□□□□ -2.11
SMC4YLR086W MET6P05694 767 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W RPL11AP0C0W9 174 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W AFR1P33304 620 aa1.86□□□□□ -2.11
SMC4YLR086W GDH3P39708 457 aa1.86□□□□□ -2.11
SMC4YLR086W MGS1P40151 587 aa1.86□□□□□ -2.11
SMC4YLR086W YFL066CP43538 392 aa1.86□□□□□ -2.11
SMC4YLR086W BUD9P53226 547 aa1.86□□□□□ -2.11
SMC4YLR086W HOS3Q02959 697 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W SIZ1Q04195 904 aa1.86□□□□□ -2.11
SMC4YLR086W LCD1Q04377 747 aa1.86□□□□□ -2.11
SMC4YLR086W YLR001CQ07895 862 aa1.86□□□□□ -2.11
SMC4YLR086W PTC5Q12511 572 aa1.86□□□□□ -2.11
SMC4YLR086W RPL11BQ3E757 174 aaPredicted RBP1.86□□□□□ -2.11
SMC4YLR086W RET1P22276 1149 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W BET3P36149 193 aa1.86□□□□□ -2.11
SMC4YLR086W MSH4P40965 878 aaPredicted RBP1.86□□□□□ -2.11
SMC4YLR086W RTA1P53047 317 aa1.86□□□□□ -2.11
SMC4YLR086W TNA1P53322 534 aa1.86□□□□□ -2.11
SMC4YLR086W EAF1Q06337 982 aa1.86□□□□□ -2.11
SMC4YLR086W AI1P03875 834 aa1.86□□□□□ -2.11
SMC4YLR086W TOP1P04786 769 aa1.86□□□□□ -2.11
SMC4YLR086W SAM35P14693 329 aa1.86□□□□□ -2.11
SMC4YLR086W MDL2P33311 773 aa1.86□□□□□ -2.11
SMC4YLR086W YKL151CP36059 337 aa1.86□□□□□ -2.11
SMC4YLR086W UGA2P38067 497 aa1.86□□□□□ -2.11
SMC4YLR086W ALG14P38242 237 aa1.86□□□□□ -2.11
SMC4YLR086W CCC2P38995 1004 aa1.86□□□□□ -2.11
SMC4YLR086W YGL176CP46945 554 aa1.86□□□□□ -2.11
SMC4YLR086W CCM1P48237 864 aaPredicted RBP1.86□□□□□ -2.11
SMC4YLR086W YGR125WP53273 1036 aa1.86□□□□□ -2.11
SMC4YLR086W SRP1Q02821 542 aaKnown RBP1.86□□□□□ -2.11
SMC4YLR086W AOS1Q06624 347 aa1.86□□□□□ -2.11
SMC4YLR086W GIC2Q06648 383 aa1.86□□□□□ -2.11
SMC4YLR086W ERS1P17261 260 aa1.85□□□□□ -2.11
SMC4YLR086W KIP1P28742 1111 aa1.85□□□□□ -2.11
SMC4YLR086W FUN30P31380 1131 aa1.85□□□□□ -2.11
SMC4YLR086W ABD1P32783 436 aaPredicted RBP1.85□□□□□ -2.11
SMC4YLR086W MNN1P39106 762 aa1.85□□□□□ -2.11
SMC4YLR086W YJL181WP46987 611 aa1.85□□□□□ -2.11
SMC4YLR086W YER152CP10356 443 aa1.85□□□□□ -2.11
SMC4YLR086W YSC84P32793 468 aa1.85□□□□□ -2.11
SMC4YLR086W MTC2P34246 357 aa1.85□□□□□ -2.11
SMC4YLR086W CAF16P43569 289 aa1.85□□□□□ -2.11
SMC4YLR086W DOT1Q04089 582 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W HPF1Q05164 967 aa1.85□□□□□ -2.11
SMC4YLR086W YLR225CQ05948 407 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W YDL124WQ07551 312 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W FBP1P09201 348 aa1.85□□□□□ -2.11
SMC4YLR086W SSB1P11484 613 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W RPL8AP17076 256 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W RSC6P25632 483 aa1.85□□□□□ -2.11
SMC4YLR086W PPG1P32838 368 aa1.85□□□□□ -2.11
SMC4YLR086W TIM23P32897 222 aa1.85□□□□□ -2.11
SMC4YLR086W PEX6P33760 1030 aa1.85□□□□□ -2.11
SMC4YLR086W EMC3P36039 253 aa1.85□□□□□ -2.11
SMC4YLR086W SKN7P38889 622 aa1.85□□□□□ -2.11
SMC4YLR086W SSB2P40150 613 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W TED1P40533 473 aa1.85□□□□□ -2.11
SMC4YLR086W YLR257WQ06146 321 aaKnown RBP1.85□□□□□ -2.11
SMC4YLR086W AVO1Q08236 1176 aa1.85□□□□□ -2.11
SMC4YLR086W PUS7Q08647 676 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms