RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C RKM4Q12504 494 aa5.67□□□□□ -1.5
RTA1YGR213C GCD1P09032 578 aaPredicted RBP5.66□□□□□ -1.5
RTA1YGR213C SBP1P10080 294 aaKnown RBP5.66□□□□□ -1.5
RTA1YGR213C YER152CP10356 443 aa5.66□□□□□ -1.5
RTA1YGR213C AGP1P25376 633 aa5.66□□□□□ -1.5
RTA1YGR213C YKL069WP36088 180 aa5.66□□□□□ -1.5
RTA1YGR213C YHL012WP38709 493 aa5.66□□□□□ -1.5
RTA1YGR213C KRI1P42846 591 aaKnown RBP5.66□□□□□ -1.5
RTA1YGR213C YLR225CQ05948 407 aaKnown RBP5.66□□□□□ -1.5
RTA1YGR213C URN1Q06525 465 aaKnown RBP5.66□□□□□ -1.5
RTA1YGR213C GNT1Q12096 491 aa5.66□□□□□ -1.5
RTA1YGR213C YPL066WQ12194 479 aa5.66□□□□□ -1.5
RTA1YGR213C PRI2P20457 528 aa5.65□□□□□ -1.5
RTA1YGR213C SRO9P25567 434 aaKnown RBP5.65□□□□□ -1.5
RTA1YGR213C BAP2P38084 609 aa5.65□□□□□ -1.5
RTA1YGR213C SEA4P38164 1038 aa5.65□□□□□ -1.5
RTA1YGR213C TOS1P38288 455 aa5.65□□□□□ -1.5
RTA1YGR213C TNA1P53322 534 aa5.65□□□□□ -1.5
RTA1YGR213C ALO1P54783 526 aaKnown RBP5.65□□□□□ -1.5
RTA1YGR213C HOS3Q02959 697 aaKnown RBP5.65□□□□□ -1.5
RTA1YGR213C ESC2Q06340 456 aa5.65□□□□□ -1.5
RTA1YGR213C SNF5P18480 905 aa5.64□□□□□ -1.51
RTA1YGR213C SBA1P28707 216 aaKnown RBP5.64□□□□□ -1.51
RTA1YGR213C ABD1P32783 436 aaPredicted RBP5.64□□□□□ -1.51
RTA1YGR213C MDL2P33311 773 aa5.64□□□□□ -1.51
RTA1YGR213C YKL107WP34251 309 aa5.64□□□□□ -1.51
RTA1YGR213C RCL1Q08096 367 aaPredicted RBP5.64□□□□□ -1.51
RTA1YGR213C WRS1Q12109 432 aaKnown RBP5.64□□□□□ -1.51
RTA1YGR213C COQ4O13525 335 aa5.63□□□□□ -1.51
RTA1YGR213C PUB1P32588 453 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
RTA1YGR213C PIN4P34217 668 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
RTA1YGR213C SPF1P39986 1215 aaKnown RBP5.63□□□□□ -1.51
RTA1YGR213C YGL176CP46945 554 aa5.63□□□□□ -1.51
RTA1YGR213C INP52P50942 1183 aa5.63□□□□□ -1.51
RTA1YGR213C SHE9Q04172 456 aa5.63□□□□□ -1.51
RTA1YGR213C GLT1Q12680 2145 aaKnown RBP5.62□□□□□ -1.51
RTA1YGR213C PRO1P32264 428 aa5.62□□□□□ -1.51
RTA1YGR213C PNT1P38969 423 aa5.62□□□□□ -1.51
RTA1YGR213C SIP5P40210 489 aaKnown RBP5.62□□□□□ -1.51
RTA1YGR213C CTH1P47976 325 aa5.62□□□□□ -1.51
RTA1YGR213C SDH1Q00711 640 aa5.62□□□□□ -1.51
RTA1YGR213C SSY1Q03770 852 aa5.62□□□□□ -1.51
RTA1YGR213C BRE4Q07660 1125 aa5.62□□□□□ -1.51
RTA1YGR213C RPL11AP0C0W9 174 aaKnown RBP5.61□□□□□ -1.51
RTA1YGR213C ADP1P25371 1049 aa5.61□□□□□ -1.51
RTA1YGR213C OMA1P36163 345 aa5.61□□□□□ -1.51
RTA1YGR213C VBA5P36172 582 aa5.61□□□□□ -1.51
RTA1YGR213C CCZ1P38273 704 aa5.61□□□□□ -1.51
RTA1YGR213C PTC7P38797 343 aa5.61□□□□□ -1.51
RTA1YGR213C TAT2P38967 592 aa5.61□□□□□ -1.51
RTA1YGR213C PIK1P39104 1066 aa5.61□□□□□ -1.51
RTA1YGR213C SNF7P39929 240 aaKnown RBP5.61□□□□□ -1.51
RTA1YGR213C SPP382Q06411 708 aaPredicted RBP5.61□□□□□ -1.51
RTA1YGR213C TDA5Q06417 326 aaKnown RBP5.61□□□□□ -1.51
RTA1YGR213C RSC58Q07979 502 aa5.61□□□□□ -1.51
RTA1YGR213C RPL11BQ3E757 174 aaPredicted RBP5.61□□□□□ -1.51
RTA1YGR213C DBP2P24783 546 aaKnown RBP5.6□□□□□ -1.51
RTA1YGR213C GRX1P25373 110 aaKnown RBP5.6□□□□□ -1.51
RTA1YGR213C MXR1P40029 184 aa5.6□□□□□ -1.51
RTA1YGR213C GTS1P40956 396 aa5.6□□□□□ -1.51
RTA1YGR213C YFL054CP43549 646 aa5.6□□□□□ -1.51
RTA1YGR213C NNF1P47149 201 aa5.6□□□□□ -1.51
RTA1YGR213C ORC3P54790 616 aa5.59□□□□□ -1.51
RTA1YGR213C NBA1Q08229 501 aaKnown RBP5.59□□□□□ -1.51
RTA1YGR213C LPX1Q12405 387 aaKnown RBP5.59□□□□□ -1.51
RTA1YGR213C LIP5P32875 414 aa5.58□□□□□ -1.52
RTA1YGR213C STE5P32917 917 aa5.58□□□□□ -1.52
RTA1YGR213C MRP8P35719 219 aa5.58□□□□□ -1.52
RTA1YGR213C MBP1P39678 833 aa5.58□□□□□ -1.52
RTA1YGR213C YJL049WP47048 450 aa5.58□□□□□ -1.52
RTA1YGR213C ACM1Q08981 209 aa5.58□□□□□ -1.52
RTA1YGR213C SLA2P33338 968 aa5.57□□□□□ -1.52
RTA1YGR213C GEM1P39722 662 aa5.57□□□□□ -1.52
RTA1YGR213C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
RTA1YGR213C AIM26P32858 118 aa5.56□□□□□ -1.52
RTA1YGR213C HSP78P33416 811 aa5.56□□□□□ -1.52
RTA1YGR213C MAC1P35192 417 aa5.56□□□□□ -1.52
RTA1YGR213C UGA2P38067 497 aa5.56□□□□□ -1.52
RTA1YGR213C PBY1P38254 753 aa5.56□□□□□ -1.52
RTA1YGR213C OCA5P38738 679 aa5.56□□□□□ -1.52
RTA1YGR213C IRR1P40541 1150 aa5.56□□□□□ -1.52
RTA1YGR213C NAN1Q02931 896 aaKnown RBP5.56□□□□□ -1.52
RTA1YGR213C RSB1Q08417 382 aa5.56□□□□□ -1.52
RTA1YGR213C YBR184WP38299 523 aa5.55□□□□□ -1.52
RTA1YGR213C ATG13Q06628 738 aa5.54□□□□□ -1.52
RTA1YGR213C BI4P03879 638 aa5.53□□□□□ -1.52
RTA1YGR213C THS1P04801 734 aaKnown RBP5.53□□□□□ -1.52
RTA1YGR213C SPS1P08458 490 aa5.53□□□□□ -1.52
RTA1YGR213C RAD4P14736 754 aa5.53□□□□□ -1.52
RTA1YGR213C SEC26P41810 973 aaKnown RBP5.53□□□□□ -1.52
RTA1YGR213C PFD1P46988 109 aa5.53□□□□□ -1.52
RTA1YGR213C FMP25Q08023 583 aa5.53□□□□□ -1.52
RTA1YGR213C YKL151CP36059 337 aa5.52□□□□□ -1.53
RTA1YGR213C ABZ1P37254 787 aaPredicted RBP5.52□□□□□ -1.53
RTA1YGR213C GUS1P46655 708 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
RTA1YGR213C YOL098CQ12496 1037 aa5.52□□□□□ -1.53
RTA1YGR213C RPL8BP29453 256 aaKnown RBP5.51□□□□□ -1.53
RTA1YGR213C RRT14P40470 206 aa5.51□□□□□ -1.53
RTA1YGR213C IOC3P43596 787 aa5.51□□□□□ -1.53
RTA1YGR213C FOL2P51601 243 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms