RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF130	YGR134W	FAL1	Q12099	399 aa	Known RBP	4.08	□□□□□ -1.76
CAF130	YGR134W	SMY2	P32909	740 aa	Known RBP	4.08	□□□□□ -1.76
CAF130	YGR134W	YGL140C	P53120	1219 aa		4.08	□□□□□ -1.76
CAF130	YGR134W	ERP6	P53198	216 aa		4.08	□□□□□ -1.76
CAF130	YGR134W	TIM11	P81449	96 aa	Predicted RBP	4.08	□□□□□ -1.76
CAF130	YGR134W	HEH2	Q03281	663 aa		4.08	□□□□□ -1.76
CAF130	YGR134W	SXM1	Q04175	944 aa	Known RBP	4.08	□□□□□ -1.76
CAF130	YGR134W	EIS1	Q05050	843 aa	Known RBP	4.08	□□□□□ -1.76
CAF130	YGR134W	OXR1	Q08952	273 aa		4.08	□□□□□ -1.76
CAF130	YGR134W	PGC1	Q08959	321 aa		4.08	□□□□□ -1.76
CAF130	YGR134W	HTA1	P04911	132 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	HTA2	P04912	132 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	RPS31	P05759	152 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	MCM1	P11746	286 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	GFA1	P14742	717 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	DAL3	P32459	195 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	BAP2	P38084	609 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	RIM11	P38615	370 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	LSM5	P40089	93 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	MID1	P41821	548 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	QRI7	P43122	407 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	PUS4	P48567	403 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	YDR286C	Q05530	114 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	RGA2	Q06407	1009 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	KIP2	P28743	706 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	CBF2	P32504	956 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	TYS1	P36421	394 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	PTC4	P38089	393 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	YFL034W	P43564	1073 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	BFA1	P47113	574 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	GPI8	P49018	411 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	SUT1	P53032	299 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	MOT3	P54785	490 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	YLR257W	Q06146	321 aa	Known RBP	4.07	□□□□□ -1.76
CAF130	YGR134W	EAF1	Q06337	982 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	MLC2	Q06580	163 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	SPO75	Q07798	868 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	ATG2	P53855	1592 aa		4.07	□□□□□ -1.76
CAF130	YGR134W	SPT16	P32558	1035 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	MRP8	P35719	219 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	PBY1	P38254	753 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	LRP1	P38801	184 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	HVG1	P0CE11	249 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	RGP1	P16664	663 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	NPL6	P32832	435 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	PSY2	P40164	858 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	SIP5	P40210	489 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	SAP185	P40856	1058 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	HXT10	P43581	546 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	RMD8	P43620	662 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	PRP3	Q03338	469 aa	Predicted RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	SRD1	P09007	221 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	SIS1	P25294	352 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	HXT6	P39003	570 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	HXT7	P39004	570 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	OAF1	P39720	1047 aa	Predicted RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	TIF4632	P39936	914 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	RRD1	P40454	393 aa	Known RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	IRC6	P43615	237 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	SPN1	Q06505	410 aa	Predicted RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	BUD20	Q08004	166 aa	Predicted RBP	4.06	□□□□□ -1.76
CAF130	YGR134W	NYV1	Q12255	253 aa		4.06	□□□□□ -1.76
CAF130	YGR134W	PET309	P32522	965 aa	Predicted RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	NIC96	P34077	839 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	UBA2	P52488	636 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	SIW14	P53965	281 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	GIC2	Q06648	383 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	UTP4	Q06679	776 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	NEW1	Q08972	1196 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	MSB4	Q12317	492 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	RVB2	Q12464	471 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	PCM1	P38628	557 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	HLJ1	P48353	224 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	YLR225C	Q05948	407 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	ATG20	Q07528	640 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	TMA46	Q12000	345 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	SCM3	Q12334	223 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	RRP36	Q12481	300 aa	Predicted RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	CDC9	P04819	755 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	RED1	P14291	827 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	YEF3	P16521	1044 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	SMC1	P32908	1225 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	IRS4	P36115	615 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	DUN1	P39009	513 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	RET2	P43621	546 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	YJR096W	P47137	282 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	ELP4	Q02884	456 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	EMG1	Q06287	252 aa	Known RBP	4.05	□□□□□ -1.76
CAF130	YGR134W	ISU2	Q12056	156 aa		4.05	□□□□□ -1.76
CAF130	YGR134W	AAD3	P25612	363 aa		4.04	□□□□□ -1.76
CAF130	YGR134W	CCT5	P40413	562 aa	Known RBP	4.04	□□□□□ -1.76
CAF130	YGR134W	UBP6	P43593	499 aa	Known RBP	4.04	□□□□□ -1.76
CAF130	YGR134W	ARE2	P53629	642 aa	Known RBP	4.04	□□□□□ -1.76
CAF130	YGR134W	YOR1	P53049	1477 aa		4.04	□□□□□ -1.76
CAF130	YGR134W	CBP3	P21560	335 aa		4.04	□□□□□ -1.76
CAF130	YGR134W	SER1	P33330	395 aa	Known RBP	4.04	□□□□□ -1.76
CAF130	YGR134W	YEL1	P34225	687 aa		4.04	□□□□□ -1.76
CAF130	YGR134W	SYH1	Q02875	849 aa	Known RBP	4.04	□□□□□ -1.76
CAF130	YGR134W	ISU1	Q03020	165 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms