RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W CSM3Q04659 317 aa7.64□□□□□ -1.19
NUP49YGL172W GUD1Q07729 489 aa7.64□□□□□ -1.19
NUP49YGL172W LSP1Q12230 341 aaKnown RBP7.64□□□□□ -1.19
NUP49YGL172W MST1P07236 462 aa7.63□□□□□ -1.19
NUP49YGL172W SES1P07284 462 aaKnown RBP7.63□□□□□ -1.19
NUP49YGL172W THR4P16120 514 aaKnown RBP7.63□□□□□ -1.19
NUP49YGL172W DJP1P40564 432 aa7.63□□□□□ -1.19
NUP49YGL172W CIT3P43635 486 aa7.63□□□□□ -1.19
NUP49YGL172W CTR1P49573 406 aa7.63□□□□□ -1.19
NUP49YGL172W RET3P53600 189 aa7.63□□□□□ -1.19
NUP49YGL172W EIS1Q05050 843 aaKnown RBP7.63□□□□□ -1.19
NUP49YGL172W PIB1Q06651 286 aa7.63□□□□□ -1.19
NUP49YGL172W WSC3Q12215 556 aa7.63□□□□□ -1.19
NUP49YGL172W ERP3Q12403 225 aa7.63□□□□□ -1.19
NUP49YGL172W ARP6Q12509 438 aa7.63□□□□□ -1.19
NUP49YGL172W RGP1P16664 663 aa7.62□□□□□ -1.19
NUP49YGL172W REG2P38232 338 aa7.62□□□□□ -1.19
NUP49YGL172W BRL1P38770 471 aa7.62□□□□□ -1.19
NUP49YGL172W ORC6P38826 435 aa7.62□□□□□ -1.19
NUP49YGL172W YLR326WQ06170 240 aaKnown RBP7.62□□□□□ -1.19
NUP49YGL172W SLK19Q08581 821 aaKnown RBP7.62□□□□□ -1.19
NUP49YGL172W TIP41Q12199 356 aa7.62□□□□□ -1.19
NUP49YGL172W YDR461C-AQ2V2P7 80 aa7.62□□□□□ -1.19
NUP49YGL172W HXK1P04806 485 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W PRE10P21242 288 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
NUP49YGL172W TKL1P23254 680 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W MBR1P23493 339 aa7.61□□□□□ -1.19
NUP49YGL172W SRO9P25567 434 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W STT3P39007 718 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W BDH2P39713 417 aa7.61□□□□□ -1.19
NUP49YGL172W PSF2P40359 213 aa7.61□□□□□ -1.19
NUP49YGL172W HST1P53685 503 aa7.61□□□□□ -1.19
NUP49YGL172W PTA1Q01329 785 aaPredicted RBP7.61□□□□□ -1.19
NUP49YGL172W ISA1Q07821 250 aaPredicted RBP7.61□□□□□ -1.19
NUP49YGL172W MET7Q08645 548 aa7.61□□□□□ -1.19
NUP49YGL172W YOR296WQ08748 1289 aa7.61□□□□□ -1.19
NUP49YGL172W MSC6Q08818 692 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W TY1B-AO13527 1196 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W ILV1P00927 576 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W TUF1P02992 437 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W GSY1P23337 708 aa7.61□□□□□ -1.19
NUP49YGL172W IME2P32581 645 aa7.61□□□□□ -1.19
NUP49YGL172W RGT1P32862 1170 aa7.61□□□□□ -1.19
NUP49YGL172W GAA1P39012 614 aa7.61□□□□□ -1.19
NUP49YGL172W MXR1P40029 184 aa7.61□□□□□ -1.19
NUP49YGL172W YGL039WP53183 348 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W ORC4P54791 529 aa7.61□□□□□ -1.19
NUP49YGL172W OYE2Q03558 400 aaKnown RBP7.61□□□□□ -1.19
NUP49YGL172W PEX19Q07418 342 aa7.61□□□□□ -1.19
NUP49YGL172W PTC5Q12511 572 aa7.61□□□□□ -1.19
NUP49YGL172W URA1P28272 314 aaPredicted RBP7.6□□□□□ -1.19
NUP49YGL172W MCM4P30665 933 aaKnown RBP7.6□□□□□ -1.19
NUP49YGL172W ISW1P38144 1129 aa7.6□□□□□ -1.19
NUP49YGL172W ATG32P40458 529 aa7.6□□□□□ -1.19
NUP49YGL172W SDA1P53313 767 aaKnown RBP7.6□□□□□ -1.19
NUP49YGL172W FAR11P53917 953 aa7.6□□□□□ -1.19
NUP49YGL172W MFM1Q02783 413 aa7.6□□□□□ -1.19
NUP49YGL172W WHI4Q07655 649 aaKnown RBP7.6□□□□□ -1.19
NUP49YGL172W ALG1P16661 449 aa7.59□□□□□ -1.19
NUP49YGL172W YUR1P26725 428 aa7.59□□□□□ -1.19
NUP49YGL172W SEC8P32855 1065 aa7.59□□□□□ -1.19
NUP49YGL172W TFC4P33339 1025 aa7.59□□□□□ -1.19
NUP49YGL172W DBP7P36120 742 aaKnown RBP7.59□□□□□ -1.19
NUP49YGL172W EDS1P38073 919 aa7.59□□□□□ -1.19
NUP49YGL172W RTC4P53850 401 aa7.59□□□□□ -1.19
NUP49YGL172W YMR321CQ04898 105 aa7.59□□□□□ -1.19
NUP49YGL172W YLH47Q06493 454 aa7.59□□□□□ -1.19
NUP49YGL172W ICL2Q12031 575 aa7.59□□□□□ -1.19
NUP49YGL172W FRS2P15625 503 aaKnown RBP7.58□□□□□ -1.2
NUP49YGL172W CLB5P30283 435 aa7.58□□□□□ -1.2
NUP49YGL172W UBP11P36026 717 aa7.58□□□□□ -1.2
NUP49YGL172W HYR1P40581 163 aaKnown RBP7.58□□□□□ -1.2
NUP49YGL172W VPS53P47061 822 aa7.58□□□□□ -1.2
NUP49YGL172W YGR153WP48238 217 aa7.58□□□□□ -1.2
NUP49YGL172W UBP15P50101 1230 aa7.58□□□□□ -1.2
NUP49YGL172W HUL5P53119 910 aa7.58□□□□□ -1.2
NUP49YGL172W BRE5P53741 515 aaKnown RBP7.58□□□□□ -1.2
NUP49YGL172W ULP1Q02724 621 aa7.58□□□□□ -1.2
NUP49YGL172W SVF1Q05515 481 aa7.58□□□□□ -1.2
NUP49YGL172W ESS1P22696 170 aa7.57□□□□□ -1.2
NUP49YGL172W SCS3P53012 380 aa7.57□□□□□ -1.2
NUP49YGL172W MMR1Q06324 491 aa7.57□□□□□ -1.2
NUP49YGL172W TRM11Q12463 433 aa7.57□□□□□ -1.2
NUP49YGL172W SMC6Q12749 1114 aa7.57□□□□□ -1.2
NUP49YGL172W PGK1P00560 416 aaKnown RBP7.56□□□□□ -1.2
NUP49YGL172W KEX1P09620 729 aa7.56□□□□□ -1.2
NUP49YGL172W PAH1P32567 862 aa7.56□□□□□ -1.2
NUP49YGL172W PGM1P33401 570 aaKnown RBP7.56□□□□□ -1.2
NUP49YGL172W CCT5P40413 562 aaKnown RBP7.56□□□□□ -1.2
NUP49YGL172W CIR1P42940 261 aa7.56□□□□□ -1.2
NUP49YGL172W DIP5P53388 608 aa7.56□□□□□ -1.2
NUP49YGL172W CNM67P53865 581 aaKnown RBP7.56□□□□□ -1.2
NUP49YGL172W ADY4Q05955 493 aa7.56□□□□□ -1.2
NUP49YGL172W CRD1Q07560 283 aa7.56□□□□□ -1.2
NUP49YGL172W APC11Q12157 165 aa7.56□□□□□ -1.2
NUP49YGL172W YOR131CQ12486 218 aa7.56□□□□□ -1.2
NUP49YGL172W HIS4P00815 799 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W SUP45P12385 437 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W POX1P13711 748 aa7.55□□□□□ -1.2
NUP49YGL172W MCM3P24279 971 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms