RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C AOS1Q06624 347 aa5.29□□□□□ -1.56
PGD1YGL025C YER152CP10356 443 aa5.28□□□□□ -1.56
PGD1YGL025C SNF5P18480 905 aa5.28□□□□□ -1.56
PGD1YGL025C LYP1P32487 611 aa5.28□□□□□ -1.56
PGD1YGL025C BAP2P38084 609 aa5.28□□□□□ -1.56
PGD1YGL025C RPN3P40016 523 aaKnown RBP5.28□□□□□ -1.56
PGD1YGL025C YGR053CP53234 283 aa5.28□□□□□ -1.56
PGD1YGL025C HOS3Q02959 697 aaKnown RBP5.28□□□□□ -1.56
PGD1YGL025C VPS16Q03308 798 aa5.28□□□□□ -1.56
PGD1YGL025C TRP2P00899 507 aaKnown RBP5.27□□□□□ -1.57
PGD1YGL025C POL12P38121 705 aaPredicted RBP5.27□□□□□ -1.57
PGD1YGL025C YFL054CP43549 646 aa5.27□□□□□ -1.57
PGD1YGL025C FAA4P47912 694 aaKnown RBP5.27□□□□□ -1.57
PGD1YGL025C TNA1P53322 534 aa5.27□□□□□ -1.57
PGD1YGL025C JIP5Q06214 492 aaPredicted RBP5.27□□□□□ -1.57
PGD1YGL025C RSC58Q07979 502 aa5.27□□□□□ -1.57
PGD1YGL025C PIN2Q12057 282 aa5.27□□□□□ -1.57
PGD1YGL025C DFG16Q99234 619 aa5.27□□□□□ -1.57
PGD1YGL025C COQ4O13525 335 aa5.26□□□□□ -1.57
PGD1YGL025C HNT2P49775 206 aa5.26□□□□□ -1.57
PGD1YGL025C CLN2P20438 545 aa5.25□□□□□ -1.57
PGD1YGL025C PUF4P25339 888 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
PGD1YGL025C TYW3P53177 273 aa5.25□□□□□ -1.57
PGD1YGL025C MOT2P34909 587 aaKnown RBP5.24□□□□□ -1.57
PGD1YGL025C MCM7P38132 845 aa5.24□□□□□ -1.57
PGD1YGL025C PIK1P39104 1066 aa5.24□□□□□ -1.57
PGD1YGL025C MAD1P40957 749 aa5.24□□□□□ -1.57
PGD1YGL025C GDE1Q02979 1223 aa5.24□□□□□ -1.57
PGD1YGL025C YPL066WQ12194 479 aa5.24□□□□□ -1.57
PGD1YGL025C INO1P11986 533 aa5.23□□□□□ -1.57
PGD1YGL025C NAP1P25293 417 aaKnown RBP5.23□□□□□ -1.57
PGD1YGL025C AIM26P32858 118 aa5.23□□□□□ -1.57
PGD1YGL025C SEG2P34250 1132 aa5.23□□□□□ -1.57
PGD1YGL025C AVT1P47082 602 aa5.23□□□□□ -1.57
PGD1YGL025C ECL1P48235 211 aa5.23□□□□□ -1.57
PGD1YGL025C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PGD1YGL025C ESC2Q06340 456 aa5.23□□□□□ -1.57
PGD1YGL025C GNT1Q12096 491 aa5.23□□□□□ -1.57
PGD1YGL025C DBP2P24783 546 aaKnown RBP5.22□□□□□ -1.57
PGD1YGL025C ABZ1P37254 787 aaPredicted RBP5.22□□□□□ -1.57
PGD1YGL025C CCZ1P38273 704 aa5.22□□□□□ -1.57
PGD1YGL025C MXR1P40029 184 aa5.22□□□□□ -1.57
PGD1YGL025C YLR225CQ05948 407 aaKnown RBP5.22□□□□□ -1.57
PGD1YGL025C YDL177CQ12257 170 aa5.22□□□□□ -1.57
PGD1YGL025C RPL11AP0C0W9 174 aaKnown RBP5.21□□□□□ -1.58
PGD1YGL025C PNT1P38969 423 aa5.21□□□□□ -1.58
PGD1YGL025C CWC24P53769 259 aa5.21□□□□□ -1.58
PGD1YGL025C NBA1Q08229 501 aaKnown RBP5.21□□□□□ -1.58
PGD1YGL025C RKM4Q12504 494 aa5.21□□□□□ -1.58
PGD1YGL025C RPL11BQ3E757 174 aaPredicted RBP5.21□□□□□ -1.58
PGD1YGL025C ELM1P32801 640 aa5.2□□□□□ -1.58
PGD1YGL025C SIP5P40210 489 aaKnown RBP5.2□□□□□ -1.58
PGD1YGL025C YGL176CP46945 554 aa5.2□□□□□ -1.58
PGD1YGL025C SPO20Q04359 397 aa5.2□□□□□ -1.58
PGD1YGL025C RSB1Q08417 382 aa5.2□□□□□ -1.58
PGD1YGL025C SPS1P08458 490 aa5.19□□□□□ -1.58
PGD1YGL025C BAS1P22035 811 aa5.19□□□□□ -1.58
PGD1YGL025C TSA1P34760 196 aaKnown RBP5.19□□□□□ -1.58
PGD1YGL025C ETP1P38748 585 aaKnown RBP5.19□□□□□ -1.58
PGD1YGL025C ALD6P54115 500 aaKnown RBP5.19□□□□□ -1.58
PGD1YGL025C OPI10Q08202 246 aa5.19□□□□□ -1.58
PGD1YGL025C RNQ1P25367 405 aa5.18□□□□□ -1.58
PGD1YGL025C ABD1P32783 436 aaPredicted RBP5.18□□□□□ -1.58
PGD1YGL025C YKL107WP34251 309 aa5.18□□□□□ -1.58
PGD1YGL025C YKL069WP36088 180 aa5.18□□□□□ -1.58
PGD1YGL025C VAC8P39968 578 aa5.18□□□□□ -1.58
PGD1YGL025C SEC26P41810 973 aaKnown RBP5.18□□□□□ -1.58
PGD1YGL025C SPP382Q06411 708 aaPredicted RBP5.18□□□□□ -1.58
PGD1YGL025C CDA2Q06703 312 aa5.18□□□□□ -1.58
PGD1YGL025C GAS1P22146 559 aaKnown RBP5.17□□□□□ -1.58
PGD1YGL025C AGP1P25376 633 aa5.17□□□□□ -1.58
PGD1YGL025C SLA2P33338 968 aa5.17□□□□□ -1.58
PGD1YGL025C UGA2P38067 497 aa5.17□□□□□ -1.58
PGD1YGL025C FOL2P51601 243 aaKnown RBP5.17□□□□□ -1.58
PGD1YGL025C ACM1Q08981 209 aa5.17□□□□□ -1.58
PGD1YGL025C FAL1Q12099 399 aaKnown RBP5.17□□□□□ -1.58
PGD1YGL025C PRI2P20457 528 aa5.16□□□□□ -1.58
PGD1YGL025C SBA1P28707 216 aaKnown RBP5.16□□□□□ -1.58
PGD1YGL025C GEM1P39722 662 aa5.16□□□□□ -1.58
PGD1YGL025C NIT1P40447 199 aa5.16□□□□□ -1.58
PGD1YGL025C MRPL22P53881 309 aa5.16□□□□□ -1.58
PGD1YGL025C ATG13Q06628 738 aa5.16□□□□□ -1.58
PGD1YGL025C PIN4P34217 668 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
PGD1YGL025C IRC24P40580 263 aa5.15□□□□□ -1.59
PGD1YGL025C BI4P03879 638 aa5.14□□□□□ -1.59
PGD1YGL025C YKL151CP36059 337 aa5.14□□□□□ -1.59
PGD1YGL025C VBA5P36172 582 aa5.14□□□□□ -1.59
PGD1YGL025C MBP1P39678 833 aa5.14□□□□□ -1.59
PGD1YGL025C ENV11P53246 860 aa5.14□□□□□ -1.59
PGD1YGL025C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
PGD1YGL025C SVS1Q12254 260 aa5.14□□□□□ -1.59
PGD1YGL025C RIB2Q12362 591 aaKnown RBP5.14□□□□□ -1.59
PGD1YGL025C SRM1P21827 482 aa5.13□□□□□ -1.59
PGD1YGL025C RFC5P38251 354 aa5.13□□□□□ -1.59
PGD1YGL025C MTC3P53077 123 aa5.13□□□□□ -1.59
PGD1YGL025C CYC1P00044 109 aaPredicted RBP5.12□□□□□ -1.59
PGD1YGL025C ACE2P21192 770 aa5.12□□□□□ -1.59
PGD1YGL025C THI80P35202 319 aa5.12□□□□□ -1.59
PGD1YGL025C SPF1P39986 1215 aaKnown RBP5.12□□□□□ -1.59
PGD1YGL025C KRI1P42846 591 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 76.1 ms