RNA–Protein interactions for RNA: YDR085C

AFR1, Transcript of Protein required for pheromone-induced projection (shmoo) formation, yeastyeast

Gene AFR1, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFR1YDR085C TIF35Q04067 274 aaKnown RBP4.7□□□□□ -1.66
AFR1YDR085C SVF1Q05515 481 aa4.7□□□□□ -1.66
AFR1YDR085C AVT1P47082 602 aa4.69□□□□□ -1.66
AFR1YDR085C SNU71P53207 620 aaKnown RBP4.69□□□□□ -1.66
AFR1YDR085C TNA1P53322 534 aa4.69□□□□□ -1.66
AFR1YDR085C RSC58Q07979 502 aa4.69□□□□□ -1.66
AFR1YDR085C YER152CP10356 443 aa4.69□□□□□ -1.66
AFR1YDR085C SNF5P18480 905 aa4.69□□□□□ -1.66
AFR1YDR085C ECL1P48235 211 aa4.69□□□□□ -1.66
AFR1YDR085C AOS1Q06624 347 aa4.69□□□□□ -1.66
AFR1YDR085C COQ4O13525 335 aa4.68□□□□□ -1.66
AFR1YDR085C TRP2P00899 507 aaKnown RBP4.68□□□□□ -1.66
AFR1YDR085C LYP1P32487 611 aa4.68□□□□□ -1.66
AFR1YDR085C SEG2P34250 1132 aa4.68□□□□□ -1.66
AFR1YDR085C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
AFR1YDR085C AIM26P32858 118 aa4.67□□□□□ -1.66
AFR1YDR085C HNT2P49775 206 aa4.67□□□□□ -1.66
AFR1YDR085C YGR053CP53234 283 aa4.67□□□□□ -1.66
AFR1YDR085C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66 RIP-Chip
AFR1YDR085C NBA1Q08229 501 aaKnown RBP4.67□□□□□ -1.66
AFR1YDR085C NAP1P25293 417 aaKnown RBP4.66□□□□□ -1.66
AFR1YDR085C MCM7P38132 845 aa4.66□□□□□ -1.66
AFR1YDR085C CCZ1P38273 704 aa4.66□□□□□ -1.66
AFR1YDR085C TYW3P53177 273 aa4.66□□□□□ -1.66
AFR1YDR085C PIN2Q12057 282 aa4.66□□□□□ -1.66
AFR1YDR085C ELM1P32801 640 aa4.66□□□□□ -1.66
AFR1YDR085C PIK1P39104 1066 aa4.66□□□□□ -1.66
AFR1YDR085C YFL054CP43549 646 aa4.66□□□□□ -1.66
AFR1YDR085C FAA4P47912 694 aaKnown RBP4.66□□□□□ -1.66
AFR1YDR085C VPS16Q03308 798 aa4.66□□□□□ -1.66
AFR1YDR085C JIP5Q06214 492 aaPredicted RBP4.66□□□□□ -1.66
AFR1YDR085C CLN2P20438 545 aa4.65□□□□□ -1.66
AFR1YDR085C PUF4P25339 888 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
AFR1YDR085C GNT1Q12096 491 aa4.65□□□□□ -1.66
AFR1YDR085C YDL177CQ12257 170 aa4.65□□□□□ -1.66
AFR1YDR085C PAM1P37304 830 aaKnown RBP4.64□□□□□ -1.67
AFR1YDR085C MAD1P40957 749 aa4.64□□□□□ -1.67
AFR1YDR085C GDE1Q02979 1223 aa4.64□□□□□ -1.67
AFR1YDR085C SPS1P08458 490 aa4.64□□□□□ -1.67
AFR1YDR085C TSA1P34760 196 aaKnown RBP4.64□□□□□ -1.67
AFR1YDR085C MOT2P34909 587 aaKnown RBP4.64□□□□□ -1.67
AFR1YDR085C FOL2P51601 243 aaKnown RBP4.64□□□□□ -1.67
AFR1YDR085C YPL066WQ12194 479 aa4.64□□□□□ -1.67
AFR1YDR085C INO1P11986 533 aa4.63□□□□□ -1.67
AFR1YDR085C RNQ1P25367 405 aa4.63□□□□□ -1.67
AFR1YDR085C ETP1P38748 585 aaKnown RBP4.63□□□□□ -1.67
AFR1YDR085C RSB1Q08417 382 aa4.63□□□□□ -1.67
AFR1YDR085C RPL11AP0C0W9 174 aaKnown RBP4.62□□□□□ -1.67
AFR1YDR085C MXR1P40029 184 aa4.62□□□□□ -1.67
AFR1YDR085C IRC24P40580 263 aa4.62□□□□□ -1.67
AFR1YDR085C YLR225CQ05948 407 aaKnown RBP4.62□□□□□ -1.67
AFR1YDR085C RKM4Q12504 494 aa4.62□□□□□ -1.67
AFR1YDR085C RPL11BQ3E757 174 aaPredicted RBP4.62□□□□□ -1.67
AFR1YDR085C GAS1P22146 559 aaKnown RBP4.62□□□□□ -1.67
AFR1YDR085C DBP2P24783 546 aaKnown RBP4.62□□□□□ -1.67
AFR1YDR085C ABZ1P37254 787 aaPredicted RBP4.62□□□□□ -1.67
AFR1YDR085C PNT1P38969 423 aa4.62□□□□□ -1.67
AFR1YDR085C NIT1P40447 199 aa4.62□□□□□ -1.67
AFR1YDR085C SEC26P41810 973 aaKnown RBP4.62□□□□□ -1.67
AFR1YDR085C SPO20Q04359 397 aa4.62□□□□□ -1.67
AFR1YDR085C CDA2Q06703 312 aa4.62□□□□□ -1.67
AFR1YDR085C BAS1P22035 811 aa4.61□□□□□ -1.67
AFR1YDR085C ENV11P53246 860 aa4.61□□□□□ -1.67
AFR1YDR085C CWC24P53769 259 aa4.61□□□□□ -1.67
AFR1YDR085C ESC2Q06340 456 aa4.61□□□□□ -1.67
AFR1YDR085C SPP382Q06411 708 aaPredicted RBP4.61□□□□□ -1.67
AFR1YDR085C YGL176CP46945 554 aa4.6□□□□□ -1.67
AFR1YDR085C MRPL22P53881 309 aa4.6□□□□□ -1.67
AFR1YDR085C YKL107WP34251 309 aa4.6□□□□□ -1.67
AFR1YDR085C UGA2P38067 497 aa4.6□□□□□ -1.67
AFR1YDR085C PRP43P53131 767 aaKnown RBP4.6□□□□□ -1.67
AFR1YDR085C ACM1Q08981 209 aa4.6□□□□□ -1.67
AFR1YDR085C ABD1P32783 436 aaPredicted RBP4.59□□□□□ -1.67
AFR1YDR085C SLA2P33338 968 aa4.59□□□□□ -1.67
AFR1YDR085C GEM1P39722 662 aa4.59□□□□□ -1.67
AFR1YDR085C SIP5P40210 489 aaKnown RBP4.59□□□□□ -1.67
AFR1YDR085C SNO2P53823 222 aa4.59□□□□□ -1.67
AFR1YDR085C FAL1Q12099 399 aaKnown RBP4.59□□□□□ -1.67
AFR1YDR085C VAC8P39968 578 aa4.58□□□□□ -1.68
AFR1YDR085C ALD6P54115 500 aaKnown RBP4.58□□□□□ -1.68
AFR1YDR085C ATG13Q06628 738 aa4.58□□□□□ -1.68
AFR1YDR085C OPI10Q08202 246 aa4.58□□□□□ -1.68
AFR1YDR085C SVS1Q12254 260 aa4.58□□□□□ -1.68
AFR1YDR085C AGP1P25376 633 aa4.58□□□□□ -1.68
AFR1YDR085C PIN4P34217 668 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
AFR1YDR085C RFC5P38251 354 aa4.58□□□□□ -1.68
AFR1YDR085C YKL069WP36088 180 aa4.57□□□□□ -1.68
AFR1YDR085C UBP5P39944 805 aa4.57□□□□□ -1.68
AFR1YDR085C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
AFR1YDR085C CYC1P00044 109 aaPredicted RBP4.56□□□□□ -1.68
AFR1YDR085C BI4P03879 638 aa4.56□□□□□ -1.68
AFR1YDR085C PRI2P20457 528 aa4.56□□□□□ -1.68
AFR1YDR085C ACE2P21192 770 aa4.56□□□□□ -1.68
AFR1YDR085C SBA1P28707 216 aaKnown RBP4.56□□□□□ -1.68
AFR1YDR085C KRI1P42846 591 aaKnown RBP4.56□□□□□ -1.68
AFR1YDR085C RIB2Q12362 591 aaKnown RBP4.56□□□□□ -1.68
AFR1YDR085C PRP6P19735 899 aaPredicted RBP4.56□□□□□ -1.68
AFR1YDR085C THI80P35202 319 aa4.56□□□□□ -1.68
AFR1YDR085C AIM3P38266 947 aaKnown RBP4.56□□□□□ -1.68
AFR1YDR085C SNF7P39929 240 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms