RNA–Protein interactions for RNA: YDL048C

STP4, Transcript of Protein containing a Kruppel-type zinc-finger domain, yeast

Gene STP4, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STP4	YDL048C	CDC31	P06704	161 aa	Known RBP	5.43	□□□□□ -1.54
STP4	YDL048C	MSH3	P25336	1018 aa		5.43	□□□□□ -1.54
STP4	YDL048C	SAS3	P34218	831 aa		5.43	□□□□□ -1.54
STP4	YDL048C	PEX5	P35056	612 aa		5.43	□□□□□ -1.54
STP4	YDL048C	LRG1	P35688	1017 aa		5.43	□□□□□ -1.54
STP4	YDL048C	YNL247W	P53852	767 aa	Known RBP	5.43	□□□□□ -1.54
STP4	YDL048C	OYE2	Q03558	400 aa	Known RBP	5.43	□□□□□ -1.54
STP4	YDL048C	MSH6	Q03834	1242 aa		5.43	□□□□□ -1.54
STP4	YDL048C	RUD3	Q12234	484 aa	Known RBP	5.43	□□□□□ -1.54
STP4	YDL048C	RPC82	P32349	654 aa		5.42	□□□□□ -1.54
STP4	YDL048C	SEC6	P32844	805 aa		5.42	□□□□□ -1.54
STP4	YDL048C	SIC1	P38634	284 aa		5.42	□□□□□ -1.54
STP4	YDL048C	STM1	P39015	273 aa	Known RBP	5.42	□□□□□ -1.54
STP4	YDL048C	CIT3	P43635	486 aa		5.42	□□□□□ -1.54
STP4	YDL048C	BSC2	Q05611	235 aa		5.42	□□□□□ -1.54
STP4	YDL048C	PSR1	Q07800	427 aa		5.42	□□□□□ -1.54
STP4	YDL048C	CDC45	Q08032	650 aa		5.42	□□□□□ -1.54
STP4	YDL048C	PCL8	Q08966	492 aa		5.42	□□□□□ -1.54
STP4	YDL048C	NFI1	Q12216	726 aa		5.42	□□□□□ -1.54
STP4	YDL048C	NOP14	Q99207	810 aa	Known RBP	5.42	□□□□□ -1.54
STP4	YDL048C	TRL1	P09880	827 aa	Known RBP	5.41	□□□□□ -1.54
STP4	YDL048C	CMP2	P14747	604 aa		5.41	□□□□□ -1.54
STP4	YDL048C	RPC37	P36121	282 aa		5.41	□□□□□ -1.54
STP4	YDL048C	CCM1	P48237	864 aa	Predicted RBP	5.41	□□□□□ -1.54
STP4	YDL048C	SEN54	Q02825	467 aa	Predicted RBP	5.41	□□□□□ -1.54
STP4	YDL048C	RRB1	Q04225	511 aa	Known RBP	5.41	□□□□□ -1.54
STP4	YDL048C	AVO1	Q08236	1176 aa		5.41	□□□□□ -1.54
STP4	YDL048C	GLE1	Q12315	538 aa		5.41	□□□□□ -1.54
STP4	YDL048C	FLP1	P03870	423 aa		5.4	□□□□□ -1.54
STP4	YDL048C	RNQ1	P25367	405 aa		5.4	□□□□□ -1.54
STP4	YDL048C	SEG2	P34250	1132 aa		5.4	□□□□□ -1.54
STP4	YDL048C	POL12	P38121	705 aa	Predicted RBP	5.4	□□□□□ -1.54
STP4	YDL048C	YHL008C	P38750	627 aa		5.4	□□□□□ -1.54
STP4	YDL048C	SAP155	P43612	1002 aa		5.4	□□□□□ -1.54
STP4	YDL048C	GYP7	P48365	746 aa		5.4	□□□□□ -1.54
STP4	YDL048C	HUL5	P53119	910 aa		5.4	□□□□□ -1.54
STP4	YDL048C	CDC55	Q00362	526 aa		5.4	□□□□□ -1.54
STP4	YDL048C	MEC3	Q02574	474 aa		5.4	□□□□□ -1.54
STP4	YDL048C	VTI1	Q04338	217 aa		5.4	□□□□□ -1.54
STP4	YDL048C	YOR389W	Q08912	624 aa		5.4	□□□□□ -1.54
STP4	YDL048C	ALG6	Q12001	544 aa	Known RBP	5.4	□□□□□ -1.54
STP4	YDL048C	CLC1	P17891	233 aa		5.39	□□□□□ -1.55
STP4	YDL048C	TRX2	P22803	104 aa	Known RBP	5.39	□□□□□ -1.55
STP4	YDL048C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
STP4	YDL048C	TIM54	P47045	478 aa		5.39	□□□□□ -1.55
STP4	YDL048C	UTP22	P53254	1237 aa	Predicted RBP	5.39	□□□□□ -1.55
STP4	YDL048C	RCM1	P53972	490 aa		5.39	□□□□□ -1.55
STP4	YDL048C	TIM11	P81449	96 aa	Predicted RBP	5.39	□□□□□ -1.55
STP4	YDL048C	COG8	Q04632	607 aa		5.39	□□□□□ -1.55
STP4	YDL048C	CLP1	Q08685	445 aa	Predicted RBP	5.39	□□□□□ -1.55
STP4	YDL048C	DPB3	P27344	201 aa		5.39	□□□□□ -1.55
STP4	YDL048C	ARC19	P33204	171 aa	Known RBP	5.39	□□□□□ -1.55
STP4	YDL048C	GRS1	P38088	690 aa	Known RBP	5.39	□□□□□ -1.55
STP4	YDL048C	REI1	P38344	393 aa	Predicted RBP	5.39	□□□□□ -1.55
STP4	YDL048C	OYE3	P41816	400 aa	Predicted RBP	5.39	□□□□□ -1.55
STP4	YDL048C	SVL3	Q03088	825 aa	Known RBP	5.39	□□□□□ -1.55
STP4	YDL048C	RRP9	Q06506	573 aa	Known RBP	5.39	□□□□□ -1.55
STP4	YDL048C	LSP1	Q12230	341 aa	Known RBP	5.39	□□□□□ -1.55
STP4	YDL048C	NSI1	Q12457	570 aa		5.39	□□□□□ -1.55
STP4	YDL048C	RPS4A	P0CX35	261 aa	Known RBP	5.38	□□□□□ -1.55
STP4	YDL048C	RPS4B	P0CX36	261 aa	Known RBP	5.38	□□□□□ -1.55
STP4	YDL048C	YEF3	P16521	1044 aa	Known RBP	5.38	□□□□□ -1.55
STP4	YDL048C	KDX1	P36005	433 aa		5.38	□□□□□ -1.55
STP4	YDL048C	VPS24	P36095	224 aa	Known RBP	5.38	□□□□□ -1.55
STP4	YDL048C	GRX7	P38068	203 aa		5.38	□□□□□ -1.55
STP4	YDL048C	FUI1	P38196	639 aa		5.38	□□□□□ -1.55
STP4	YDL048C	NUT1	P53114	1132 aa		5.38	□□□□□ -1.55
STP4	YDL048C	EAR1	Q03212	550 aa		5.38	□□□□□ -1.55
STP4	YDL048C	SXM1	Q04175	944 aa	Known RBP	5.38	□□□□□ -1.55
STP4	YDL048C	ERV41	Q04651	352 aa		5.38	□□□□□ -1.55
STP4	YDL048C	YOR059C	Q08448	450 aa	Known RBP	5.38	□□□□□ -1.55
STP4	YDL048C	YOL098C	Q12496	1037 aa		5.38	□□□□□ -1.55
STP4	YDL048C	DFG16	Q99234	619 aa		5.38	□□□□□ -1.55
STP4	YDL048C	THS1	P04801	734 aa	Known RBP	5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-DR6	P0CX70	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-ER1	P0CX71	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-LR2	P0CX72	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-PL	P0CX73	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-JR1	P0CX74	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-LR3	P0CX75	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-ML2	P0CX76	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	ERP5	P38819	212 aa		5.37	□□□□□ -1.55
STP4	YDL048C	MDJ2	P42834	146 aa		5.37	□□□□□ -1.55
STP4	YDL048C	PMT7	Q06644	662 aa		5.37	□□□□□ -1.55
STP4	YDL048C	INP54	Q08227	384 aa	Known RBP	5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-GR1	Q12085	440 aa		5.37	□□□□□ -1.55
STP4	YDL048C	APC2	Q12440	853 aa		5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.37	□□□□□ -1.55
STP4	YDL048C	TY1A-OL	Q92392	440 aa	Known RBP	5.37	□□□□□ -1.55
STP4	YDL048C	FRT1	Q99332	602 aa		5.37	□□□□□ -1.55
STP4	YDL048C	CDC3	P32457	520 aa	Known RBP	5.36	□□□□□ -1.55
STP4	YDL048C	ANP1	P32629	500 aa		5.36	□□□□□ -1.55
STP4	YDL048C	GRX4	P32642	244 aa		5.36	□□□□□ -1.55
STP4	YDL048C	NIP100	P33420	868 aa		5.36	□□□□□ -1.55
STP4	YDL048C	ECL1	P48235	211 aa		5.36	□□□□□ -1.55
STP4	YDL048C	ALT1	P52893	592 aa		5.36	□□□□□ -1.55
STP4	YDL048C	IRC3	Q06683	689 aa		5.36	□□□□□ -1.55
STP4	YDL048C	GPI13	Q07830	1017 aa		5.36	□□□□□ -1.55
STP4	YDL048C	GRC3	Q07845	632 aa		5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 47 ms