RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	TNA1	P53322	534 aa		7.05	□□□□□ -1.28
UBS1	YBR165W	EEB1	Q02891	456 aa		7.05	□□□□□ -1.28
UBS1	YBR165W	RCL1	Q08096	367 aa	Predicted RBP	7.05	□□□□□ -1.28
UBS1	YBR165W	COQ4	O13525	335 aa		7.04	□□□□□ -1.28
UBS1	YBR165W	SNF5	P18480	905 aa		7.04	□□□□□ -1.28
UBS1	YBR165W	POL12	P38121	705 aa	Predicted RBP	7.04	□□□□□ -1.28
UBS1	YBR165W	TIF35	Q04067	274 aa	Known RBP	7.04	□□□□□ -1.28
UBS1	YBR165W	RSC58	Q07979	502 aa		7.04	□□□□□ -1.28
UBS1	YBR165W	MLS1	P30952	554 aa		7.03	□□□□□ -1.28
UBS1	YBR165W	ELM1	P32801	640 aa		7.03	□□□□□ -1.28
UBS1	YBR165W	AVT1	P47082	602 aa		7.03	□□□□□ -1.28
UBS1	YBR165W	YGR053C	P53234	283 aa		7.03	□□□□□ -1.28
UBS1	YBR165W	TRP2	P00899	507 aa	Known RBP	7.02	□□□□□ -1.29
UBS1	YBR165W	LYP1	P32487	611 aa		7.02	□□□□□ -1.29
UBS1	YBR165W	CCZ1	P38273	704 aa		7.02	□□□□□ -1.29
UBS1	YBR165W	PIK1	P39104	1066 aa		7.02	□□□□□ -1.29
UBS1	YBR165W	HNT2	P49775	206 aa		7.02	□□□□□ -1.29
UBS1	YBR165W	NBA1	Q08229	501 aa	Known RBP	7.02	□□□□□ -1.29
UBS1	YBR165W	YER152C	P10356	443 aa		7.01	□□□□□ -1.29
UBS1	YBR165W	CLN2	P20438	545 aa		7.01	□□□□□ -1.29
UBS1	YBR165W	SEG2	P34250	1132 aa		7.01	□□□□□ -1.29
UBS1	YBR165W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.01	□□□□□ -1.29	not detected
UBS1	YBR165W	AOS1	Q06624	347 aa		7.01	□□□□□ -1.29
UBS1	YBR165W	PIN2	Q12057	282 aa		7.01	□□□□□ -1.29
UBS1	YBR165W	AIM26	P32858	118 aa		7	□□□□□ -1.29
UBS1	YBR165W	TYW3	P53177	273 aa		7	□□□□□ -1.29
UBS1	YBR165W	VPS16	Q03308	798 aa		7	□□□□□ -1.29
UBS1	YBR165W	GNT1	Q12096	491 aa		7	□□□□□ -1.29
UBS1	YBR165W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
UBS1	YBR165W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	not detected
UBS1	YBR165W	TSA1	P34760	196 aa	Known RBP	6.98	□□□□□ -1.29
UBS1	YBR165W	NIT1	P40447	199 aa		6.98	□□□□□ -1.29
UBS1	YBR165W	PAM1	P37304	830 aa	Known RBP	6.97	□□□□□ -1.29
UBS1	YBR165W	MCM7	P38132	845 aa		6.97	□□□□□ -1.29
UBS1	YBR165W	FAA4	P47912	694 aa	Known RBP	6.97	□□□□□ -1.29
UBS1	YBR165W	FOL2	P51601	243 aa	Known RBP	6.97	□□□□□ -1.29
UBS1	YBR165W	ENV11	P53246	860 aa		6.97	□□□□□ -1.29
UBS1	YBR165W	YDL177C	Q12257	170 aa		6.97	□□□□□ -1.29
UBS1	YBR165W	SPS1	P08458	490 aa		6.96	□□□□□ -1.3
UBS1	YBR165W	IRC24	P40580	263 aa		6.96	□□□□□ -1.3
UBS1	YBR165W	MAD1	P40957	749 aa		6.96	□□□□□ -1.3
UBS1	YBR165W	RKM4	Q12504	494 aa		6.96	□□□□□ -1.3
UBS1	YBR165W	SEC26	P41810	973 aa	Known RBP	6.95	□□□□□ -1.3
UBS1	YBR165W	YFL054C	P43549	646 aa		6.95	□□□□□ -1.3
UBS1	YBR165W	GDE1	Q02979	1223 aa		6.95	□□□□□ -1.3
UBS1	YBR165W	JIP5	Q06214	492 aa	Predicted RBP	6.95	□□□□□ -1.3
UBS1	YBR165W	RSB1	Q08417	382 aa		6.95	□□□□□ -1.3
UBS1	YBR165W	RPL11A	P0C0W9	174 aa	Known RBP	6.94	□□□□□ -1.3
UBS1	YBR165W	INO1	P11986	533 aa		6.94	□□□□□ -1.3
UBS1	YBR165W	SPO20	Q04359	397 aa		6.94	□□□□□ -1.3
UBS1	YBR165W	CDA2	Q06703	312 aa		6.94	□□□□□ -1.3
UBS1	YBR165W	YPL066W	Q12194	479 aa		6.94	□□□□□ -1.3
UBS1	YBR165W	RPL11B	Q3E757	174 aa	Predicted RBP	6.94	□□□□□ -1.3
UBS1	YBR165W	ETP1	P38748	585 aa	Known RBP	6.93	□□□□□ -1.3
UBS1	YBR165W	PNT1	P38969	423 aa		6.93	□□□□□ -1.3
UBS1	YBR165W	PRP43	P53131	767 aa	Known RBP	6.93	□□□□□ -1.3
UBS1	YBR165W	ATG13	Q06628	738 aa		6.93	□□□□□ -1.3
UBS1	YBR165W	BAS1	P22035	811 aa		6.92	□□□□□ -1.3
UBS1	YBR165W	DBP2	P24783	546 aa	Known RBP	6.92	□□□□□ -1.3
UBS1	YBR165W	RNQ1	P25367	405 aa		6.92	□□□□□ -1.3
UBS1	YBR165W	MOT2	P34909	587 aa	Known RBP	6.92	□□□□□ -1.3
UBS1	YBR165W	ABZ1	P37254	787 aa	Predicted RBP	6.92	□□□□□ -1.3
UBS1	YBR165W	MXR1	P40029	184 aa		6.92	□□□□□ -1.3
UBS1	YBR165W	MRPL22	P53881	309 aa		6.92	□□□□□ -1.3
UBS1	YBR165W	ACM1	Q08981	209 aa		6.92	□□□□□ -1.3
UBS1	YBR165W	GAS1	P22146	559 aa	Known RBP	6.91	□□□□□ -1.3
UBS1	YBR165W	GEM1	P39722	662 aa		6.91	□□□□□ -1.3
UBS1	YBR165W	YGL176C	P46945	554 aa		6.91	□□□□□ -1.3
UBS1	YBR165W	YLR225C	Q05948	407 aa	Known RBP	6.91	□□□□□ -1.3
UBS1	YBR165W	SPP382	Q06411	708 aa	Predicted RBP	6.91	□□□□□ -1.3
UBS1	YBR165W	SLA2	P33338	968 aa		6.9	□□□□□ -1.3
UBS1	YBR165W	YKL107W	P34251	309 aa		6.9	□□□□□ -1.3
UBS1	YBR165W	SIP5	P40210	489 aa	Known RBP	6.9	□□□□□ -1.3
UBS1	YBR165W	KRI1	P42846	591 aa	Known RBP	6.9	□□□□□ -1.3
UBS1	YBR165W	SNO2	P53823	222 aa		6.9	□□□□□ -1.3
UBS1	YBR165W	AGP1	P25376	633 aa		6.89	□□□□□ -1.31
UBS1	YBR165W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.89	□□□□□ -1.31	not detected
UBS1	YBR165W	SNF7	P39929	240 aa	Known RBP	6.89	□□□□□ -1.31
UBS1	YBR165W	CWC24	P53769	259 aa		6.89	□□□□□ -1.31
UBS1	YBR165W	UGA2	P38067	497 aa		6.88	□□□□□ -1.31
UBS1	YBR165W	RFC5	P38251	354 aa		6.88	□□□□□ -1.31
UBS1	YBR165W	ESC2	Q06340	456 aa		6.88	□□□□□ -1.31
UBS1	YBR165W	SBA1	P28707	216 aa	Known RBP	6.87	□□□□□ -1.31
UBS1	YBR165W	UBP5	P39944	805 aa		6.87	□□□□□ -1.31
UBS1	YBR165W	RRT14	P40470	206 aa		6.87	□□□□□ -1.31
UBS1	YBR165W	OPI10	Q08202	246 aa		6.87	□□□□□ -1.31
UBS1	YBR165W	BI4	P03879	638 aa		6.86	□□□□□ -1.31
UBS1	YBR165W	THS1	P04801	734 aa	Known RBP	6.86	□□□□□ -1.31
UBS1	YBR165W	PRP6	P19735	899 aa	Predicted RBP	6.86	□□□□□ -1.31
UBS1	YBR165W	ACE2	P21192	770 aa		6.86	□□□□□ -1.31
UBS1	YBR165W	ABD1	P32783	436 aa	Predicted RBP	6.86	□□□□□ -1.31
UBS1	YBR165W	THI80	P35202	319 aa		6.86	□□□□□ -1.31
UBS1	YBR165W	FAL1	Q12099	399 aa	Known RBP	6.86	□□□□□ -1.31
UBS1	YBR165W	SVS1	Q12254	260 aa		6.86	□□□□□ -1.31
UBS1	YBR165W	VAC8	P39968	578 aa		6.85	□□□□□ -1.31
UBS1	YBR165W	ALD6	P54115	500 aa	Known RBP	6.85	□□□□□ -1.31
UBS1	YBR165W	RSM24	Q03976	319 aa		6.85	□□□□□ -1.31
UBS1	YBR165W	SHE9	Q04172	456 aa		6.85	□□□□□ -1.31
UBS1	YBR165W	RIB2	Q12362	591 aa	Known RBP	6.85	□□□□□ -1.31
UBS1	YBR165W	CYC1	P00044	109 aa	Predicted RBP	6.84	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms