RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 NMRK2Q9NPI5 230 aa24.86■■□□□ 1.57
VPS72-207ENST00000640458 EMILIN1Q9Y6C2 1016 aa24.86■■□□□ 1.57
VPS72-207ENST00000640458 CICQ96RK0 1608 aaPredicted RBP24.86■■□□□ 1.57
VPS72-207ENST00000640458 ARHGAP27Q6ZUM4 889 aa24.85■■□□□ 1.57
VPS72-207ENST00000640458 A0A0G2JLW4 131 aa24.84■■□□□ 1.57
VPS72-207ENST00000640458 PXDNLA1KZ92 1463 aa24.83■■□□□ 1.57
VPS72-207ENST00000640458 ATP6V1AP38606 617 aa24.83■■□□□ 1.57
VPS72-207ENST00000640458 ITPK1Q13572 414 aa24.83■■□□□ 1.57
VPS72-207ENST00000640458 POLKQ9UBT6 870 aa24.83■■□□□ 1.57
VPS72-207ENST00000640458 PER1O15534 1290 aaPredicted RBP24.82■■□□□ 1.56
VPS72-207ENST00000640458 TGFB2P61812 414 aa24.82■■□□□ 1.56
VPS72-207ENST00000640458 AMER1Q5JTC6 1135 aaPredicted RBP24.82■■□□□ 1.56
VPS72-207ENST00000640458 ASAP1Q9ULH1 1129 aa24.82■■□□□ 1.56
VPS72-207ENST00000640458 ANKRD26Q9UPS8 1709 aa24.81■■□□□ 1.56
VPS72-207ENST00000640458 NKX1-1Q15270 411 aaPredicted RBP24.81■■□□□ 1.56
VPS72-207ENST00000640458 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
VPS72-207ENST00000640458 N4BP2Q86UW6 1770 aaPredicted RBP24.8■■□□□ 1.56
VPS72-207ENST00000640458 MAP2P11137 1827 aaKnown RBP24.8■■□□□ 1.56
VPS72-207ENST00000640458 PPM1GO15355 546 aaPredicted RBP24.8■■□□□ 1.56
VPS72-207ENST00000640458 TNNT2P45379 298 aaPredicted RBP24.8■■□□□ 1.56
VPS72-207ENST00000640458 HTRA3P83110 453 aa24.8■■□□□ 1.56
VPS72-207ENST00000640458 MORC1Q86VD1 984 aa24.8■■□□□ 1.56
VPS72-207ENST00000640458 SPG7Q9UQ90 795 aa24.8■■□□□ 1.56
VPS72-207ENST00000640458 C16orf71Q8IYS4 520 aaPredicted RBP24.79■■□□□ 1.56
VPS72-207ENST00000640458 FCHSD2O94868 740 aa24.78■■□□□ 1.56
VPS72-207ENST00000640458 COL13A1Q5TAT6 717 aaPredicted RBP24.78■■□□□ 1.56
VPS72-207ENST00000640458 RBM46Q8TBY0 533 aaKnown RBP24.78■■□□□ 1.56
VPS72-207ENST00000640458 CAPN15O75808 1086 aa24.77■■□□□ 1.56
VPS72-207ENST00000640458 DPEP1P16444 411 aa24.77■■□□□ 1.56
VPS72-207ENST00000640458 PKD1L3Q7Z443 1732 aa24.77■■□□□ 1.56
VPS72-207ENST00000640458 TRAPPC3LQ5T215 181 aa24.76■■□□□ 1.55
VPS72-207ENST00000640458 NLGN1Q8N2Q7 840 aa24.76■■□□□ 1.55
VPS72-207ENST00000640458 KLRG1Q96E93 195 aa24.76■■□□□ 1.55
VPS72-207ENST00000640458 WDR90Q96KV7 1748 aa24.75■■□□□ 1.55
VPS72-207ENST00000640458 KIAA1551Q9HCM1 1747 aa24.75■■□□□ 1.55
VPS72-207ENST00000640458 KIF13BQ9NQT8 1826 aa24.75■■□□□ 1.55
VPS72-207ENST00000640458 C9orf131Q5VYM1 1079 aa24.75■■□□□ 1.55
VPS72-207ENST00000640458 CCDC87Q9NVE4 849 aa24.75■■□□□ 1.55
VPS72-207ENST00000640458 RTCBQ9Y3I0 505 aaKnown RBP24.75■■□□□ 1.55
VPS72-207ENST00000640458 C10orf71Q711Q0 1435 aa24.73■■□□□ 1.55
VPS72-207ENST00000640458 ATG3Q9NT62 314 aa24.73■■□□□ 1.55
VPS72-207ENST00000640458 NPC1L1Q9UHC9 1359 aa24.71■■□□□ 1.55
VPS72-207ENST00000640458 IFNL2Q8IZJ0 200 aa24.71■■□□□ 1.55
VPS72-207ENST00000640458 JMYQ8N9B5 988 aa24.71■■□□□ 1.55
VPS72-207ENST00000640458 ARHGEF1Q92888 912 aaKnown RBP24.71■■□□□ 1.55
VPS72-207ENST00000640458 PARP3Q9Y6F1 533 aa24.71■■□□□ 1.55
VPS72-207ENST00000640458 FSTL1Q12841 308 aa24.7■■□□□ 1.54
VPS72-207ENST00000640458 RBM42Q9BTD8 480 aaKnown RBP24.7■■□□□ 1.54
VPS72-207ENST00000640458 PHKG2P15735 406 aa24.69■■□□□ 1.54
VPS72-207ENST00000640458 EIF4A2Q14240 407 aaKnown RBP24.69■■□□□ 1.54
VPS72-207ENST00000640458 EYA1Q99502 592 aa24.69■■□□□ 1.54
VPS72-207ENST00000640458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.69■■□□□ 1.545e-8■■■■□ 20
VPS72-207ENST00000640458 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
VPS72-207ENST00000640458 GYS1P13807 737 aa24.68■■□□□ 1.54
VPS72-207ENST00000640458 RFC4P35249 363 aa24.68■■□□□ 1.54
VPS72-207ENST00000640458 CC2D1BQ5T0F9 858 aaKnown RBP24.68■■□□□ 1.54
VPS72-207ENST00000640458 TNS4Q8IZW8 715 aa24.68■■□□□ 1.54
VPS72-207ENST00000640458 PLEKHG2Q9H7P9 1386 aa24.67■■□□□ 1.54
VPS72-207ENST00000640458 KDM2BQ8NHM5 1336 aa24.67■■□□□ 1.54
VPS72-207ENST00000640458 RRAGCQ9HB90 399 aa24.67■■□□□ 1.54
VPS72-207ENST00000640458 KCPQ6ZWJ8 1503 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 ADRA2BP18089 450 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 KCNA3P22001 575 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 SLC4A9Q96Q91 983 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 RNF181Q9P0P0 153 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 C4AP0C0L4 1744 aa24.66■■□□□ 1.54
VPS72-207ENST00000640458 KDRP35968 1356 aa24.65■■□□□ 1.54
VPS72-207ENST00000640458 RC3H1Q5TC82 1133 aaKnown RBP24.64■■□□□ 1.54
VPS72-207ENST00000640458 RPS6KA4O75676 772 aa24.63■■□□□ 1.53
VPS72-207ENST00000640458 DALRD3Q5D0E6 543 aaKnown RBP24.63■■□□□ 1.53
VPS72-207ENST00000640458 BRCA1P38398 1863 aaKnown RBP24.63■■□□□ 1.53
VPS72-207ENST00000640458 DCAF5Q96JK2 942 aa24.62■■□□□ 1.53
VPS72-207ENST00000640458 MTHFSP49914 203 aa24.61■■□□□ 1.53
VPS72-207ENST00000640458 CNTNAP4Q9C0A0 1308 aa24.61■■□□□ 1.53
VPS72-207ENST00000640458 PRELPP51888 382 aa24.6■■□□□ 1.53
VPS72-207ENST00000640458 ARFGEF1Q9Y6D6 1849 aa24.6■■□□□ 1.53
VPS72-207ENST00000640458 SMC1BQ8NDV3 1235 aa24.59■■□□□ 1.53
VPS72-207ENST00000640458 ERVV-2B6SEH9 535 aa24.58■■□□□ 1.53
VPS72-207ENST00000640458 CHRNA5P30532 468 aa24.57■■□□□ 1.52
VPS72-207ENST00000640458 IL13P35225 146 aa24.57■■□□□ 1.52
VPS72-207ENST00000640458 CNGB1Q14028 1251 aaPredicted RBP24.57■■□□□ 1.52
VPS72-207ENST00000640458 SRP68Q9UHB9 627 aaKnown RBP24.57■■□□□ 1.52
VPS72-207ENST00000640458 FKBP8Q14318 412 aa24.56■■□□□ 1.52
VPS72-207ENST00000640458 COL5A3P25940 1745 aaPredicted RBP24.55■■□□□ 1.52
VPS72-207ENST00000640458 PTCD1O75127 700 aaKnown RBP24.54■■□□□ 1.52
VPS72-207ENST00000640458 CABP4P57796 275 aa24.54■■□□□ 1.52
VPS72-207ENST00000640458 DDR1Q08345 913 aa24.54■■□□□ 1.52
VPS72-207ENST00000640458 ZNF831Q5JPB2 1677 aa24.53■■□□□ 1.52
VPS72-207ENST00000640458 MYH14Q7Z406 1995 aaKnown RBP24.53■■□□□ 1.52
VPS72-207ENST00000640458 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
VPS72-207ENST00000640458 TNRC6CQ9HCJ0 1690 aaKnown RBP24.53■■□□□ 1.52
VPS72-207ENST00000640458 CRKLP46109 303 aaKnown RBP24.52■■□□□ 1.52
VPS72-207ENST00000640458 HSPA1AP0DMV8 641 aaKnown RBP24.51■■□□□ 1.51
VPS72-207ENST00000640458 HSPA1BP0DMV9 641 aaKnown RBP24.51■■□□□ 1.51
VPS72-207ENST00000640458 SBF1O95248 1867 aa24.5■■□□□ 1.51
VPS72-207ENST00000640458 RASSF7Q02833 373 aa24.5■■□□□ 1.51
VPS72-207ENST00000640458 USP42Q9H9J4 1324 aaKnown RBP24.5■■□□□ 1.51
VPS72-207ENST00000640458 DIAPH1O60610 1272 aaKnown RBP24.49■■□□□ 1.51
VPS72-207ENST00000640458 PLEKHO1Q53GL0 409 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms