RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 LYSMD3Q7Z3D4 306 aa9.62□□□□□ -0.87
ATM-229ENST00000639953 UGGT2Q9NYU1 1516 aa9.61□□□□□ -0.87
ATM-229ENST00000639953 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
ATM-229ENST00000639953 SV2AQ7L0J3 742 aa9.61□□□□□ -0.87
ATM-229ENST00000639953 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
ATM-229ENST00000639953 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
ATM-229ENST00000639953 MEN1O00255 615 aa9.6□□□□□ -0.87
ATM-229ENST00000639953 RANGAP1P46060 587 aaPredicted RBP9.6□□□□□ -0.87
ATM-229ENST00000639953 SCTRP47872 440 aa9.6□□□□□ -0.87
ATM-229ENST00000639953 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
ATM-229ENST00000639953 CUEDC1Q9NWM3 386 aaPredicted RBP9.6□□□□□ -0.87
ATM-229ENST00000639953 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
ATM-229ENST00000639953 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
ATM-229ENST00000639953 CC2D2BQ6DHV5 1058 aa9.59□□□□□ -0.87
ATM-229ENST00000639953 WHAMMQ8TF30 809 aa9.58□□□□□ -0.88
ATM-229ENST00000639953 NDUFB9Q9Y6M9 179 aa9.58□□□□□ -0.88
ATM-229ENST00000639953 ADCY10Q96PN6 1610 aa9.57□□□□□ -0.88
ATM-229ENST00000639953 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
ATM-229ENST00000639953 PCGF6Q9BYE7 350 aa9.57□□□□□ -0.88
ATM-229ENST00000639953 PCDHB11Q9Y5F2 797 aa9.57□□□□□ -0.88
ATM-229ENST00000639953 TNIKQ9UKE5 1360 aa9.57□□□□□ -0.88
ATM-229ENST00000639953 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
ATM-229ENST00000639953 PTPRGP23470 1445 aa9.56□□□□□ -0.88
ATM-229ENST00000639953 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
ATM-229ENST00000639953 MCCD1P59942 119 aaPredicted RBP9.56□□□□□ -0.88
ATM-229ENST00000639953 POU4F2Q12837 409 aa9.55□□□□□ -0.88
ATM-229ENST00000639953 ZNF385CQ66K41 422 aaPredicted RBP9.55□□□□□ -0.88
ATM-229ENST00000639953 OSBPL3Q9H4L5 887 aa9.55□□□□□ -0.88
ATM-229ENST00000639953 SAMD9Q5K651 1589 aa9.54□□□□□ -0.88
ATM-229ENST00000639953 TSGA10IPQ3SY00 556 aa9.54□□□□□ -0.88
ATM-229ENST00000639953 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
ATM-229ENST00000639953 CEP126Q9P2H0 1117 aa9.54□□□□□ -0.88
ATM-229ENST00000639953 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
ATM-229ENST00000639953 TBC1D2BQ9UPU7 963 aa9.54□□□□□ -0.88
ATM-229ENST00000639953 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
ATM-229ENST00000639953 SOCS7O14512 581 aa9.53□□□□□ -0.88
ATM-229ENST00000639953 TRAK2O60296 914 aa9.53□□□□□ -0.88
ATM-229ENST00000639953 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
ATM-229ENST00000639953 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
ATM-229ENST00000639953 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
ATM-229ENST00000639953 NLRP3Q96P20 1036 aa9.53□□□□□ -0.88
ATM-229ENST00000639953 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
ATM-229ENST00000639953 GRIP2Q9C0E4 1043 aa9.53□□□□□ -0.88
ATM-229ENST00000639953 DBN1Q16643 649 aa9.52□□□□□ -0.89
ATM-229ENST00000639953 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
ATM-229ENST00000639953 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
ATM-229ENST00000639953 RAB6BQ9NRW1 208 aa9.52□□□□□ -0.89
ATM-229ENST00000639953 FHOD3Q2V2M9 1422 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 GPC1P35052 558 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 GSK3AP49840 483 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 RIPOR1Q6ZS17 1223 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 CYP2U1Q7Z449 544 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 GAS2L1Q99501 681 aaPredicted RBP9.51□□□□□ -0.89
ATM-229ENST00000639953 PLB1Q6P1J6 1458 aa9.51□□□□□ -0.89
ATM-229ENST00000639953 UACAQ9BZF9 1416 aa9.5□□□□□ -0.89
ATM-229ENST00000639953 GPR25O00155 361 aa9.5□□□□□ -0.89
ATM-229ENST00000639953 CLN3Q13286 438 aa9.5□□□□□ -0.89
ATM-229ENST00000639953 GAS6Q14393 721 aa9.5□□□□□ -0.89
ATM-229ENST00000639953 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
ATM-229ENST00000639953 ESF1Q9H501 851 aaKnown RBP9.5□□□□□ -0.89
ATM-229ENST00000639953 ABCC2Q92887 1545 aa9.5□□□□□ -0.89
ATM-229ENST00000639953 KCNMA1Q12791 1236 aa9.49□□□□□ -0.89
ATM-229ENST00000639953 IRF5Q13568 498 aa9.49□□□□□ -0.89
ATM-229ENST00000639953 ZNF837Q96EG3 531 aaPredicted RBP9.49□□□□□ -0.89
ATM-229ENST00000639953 UHRF1BP1LA0JNW5 1464 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 APBB1O00213 710 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 ARHGEF15O94989 841 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 NBPF10Q6P3W6 841 aaKnown RBP9.48□□□□□ -0.89
ATM-229ENST00000639953 LYPD4Q6UWN0 246 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 NBPF15Q8N660 670 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 ZNF592Q92610 1267 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 ABCA8O94911 1581 aa9.48□□□□□ -0.89
ATM-229ENST00000639953 ZCCHC11Q5TAX3 1644 aaKnown RBP9.48□□□□□ -0.89
ATM-229ENST00000639953 ARID3CA6NKF2 412 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 IL2RAP01589 272 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 PHTF2Q8N3S3 785 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 DYRK1BQ9Y463 629 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 KIF13AQ9H1H9 1805 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
ATM-229ENST00000639953 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.89
ATM-229ENST00000639953 STAU1O95793 577 aaKnown RBP9.46□□□□□ -0.9
ATM-229ENST00000639953 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
ATM-229ENST00000639953 CENPCQ03188 943 aa9.46□□□□□ -0.9
ATM-229ENST00000639953 CNKSR1Q969H4 720 aa9.46□□□□□ -0.9
ATM-229ENST00000639953 GTPBP3Q969Y2 492 aaKnown RBP9.46□□□□□ -0.9
ATM-229ENST00000639953 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
ATM-229ENST00000639953 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
ATM-229ENST00000639953 VAC14Q08AM6 782 aa9.45□□□□□ -0.9
ATM-229ENST00000639953 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
ATM-229ENST00000639953 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
ATM-229ENST00000639953 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
ATM-229ENST00000639953 GNRH1P01148 92 aa9.44□□□□□ -0.9
ATM-229ENST00000639953 PHKA2P46019 1235 aa9.44□□□□□ -0.9
ATM-229ENST00000639953 SRSF11Q05519 484 aaKnown RBP9.44□□□□□ -0.9
ATM-229ENST00000639953 KCTD17Q8N5Z5 321 aa9.44□□□□□ -0.9
ATM-229ENST00000639953 XAGE2Q96GT9 111 aa9.44□□□□□ -0.9
ATM-229ENST00000639953 TIMMDC1Q9NPL8 285 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms