RNA–Protein interactions for RNA: ENST00000639324.1

SCARB2-217, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-217ENST00000639324 FOXR1Q6PIV2 292 aa10.53□□□□□ -0.72
SCARB2-217ENST00000639324 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
SCARB2-217ENST00000639324 CHIC2Q9UKJ5 165 aa10.53□□□□□ -0.72
SCARB2-217ENST00000639324 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-217ENST00000639324 PHKA2P46019 1235 aa10.52□□□□□ -0.73
SCARB2-217ENST00000639324 MAP3K10Q02779 954 aa10.52□□□□□ -0.73
SCARB2-217ENST00000639324 UBAP2LQ14157 1087 aaKnown RBP10.52□□□□□ -0.73
SCARB2-217ENST00000639324 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
SCARB2-217ENST00000639324 SUZ12Q15022 739 aaKnown RBP10.51□□□□□ -0.73
SCARB2-217ENST00000639324 SCARF2Q96GP6 870 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-217ENST00000639324 ETNK1Q9HBU6 452 aa10.51□□□□□ -0.73
SCARB2-217ENST00000639324 GPAMQ9HCL2 828 aa10.51□□□□□ -0.73
SCARB2-217ENST00000639324 VAC14Q08AM6 782 aa10.5□□□□□ -0.73
SCARB2-217ENST00000639324 C4orf17Q53FE4 359 aa10.5□□□□□ -0.73
SCARB2-217ENST00000639324 TRERF1Q96PN7 1200 aa10.5□□□□□ -0.73
SCARB2-217ENST00000639324 ZSCAN10Q96SZ4 725 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-217ENST00000639324 DOLKQ9UPQ8 538 aa10.5□□□□□ -0.73
SCARB2-217ENST00000639324 DNMT3AQ9Y6K1 912 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-217ENST00000639324 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
SCARB2-217ENST00000639324 BCRP11274 1271 aa10.49□□□□□ -0.73
SCARB2-217ENST00000639324 MX2P20592 715 aa10.49□□□□□ -0.73
SCARB2-217ENST00000639324 EIF4G2P78344 907 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCARB2-217ENST00000639324 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
SCARB2-217ENST00000639324 CNTNAP5Q8WYK1 1306 aa10.49□□□□□ -0.73
SCARB2-217ENST00000639324 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
SCARB2-217ENST00000639324 A0A1B0GTH6 734 aa10.47□□□□□ -0.73
SCARB2-217ENST00000639324 RNF135Q8IUD6 432 aa10.47□□□□□ -0.73
SCARB2-217ENST00000639324 SCNN1DP51172 638 aa10.46□□□□□ -0.73
SCARB2-217ENST00000639324 USP4Q13107 963 aa10.46□□□□□ -0.73
SCARB2-217ENST00000639324 SLFNL1Q499Z3 407 aa10.46□□□□□ -0.73
SCARB2-217ENST00000639324 ENAMQ9NRM1 1142 aa10.46□□□□□ -0.73
SCARB2-217ENST00000639324 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
SCARB2-217ENST00000639324 CUX2O14529 1486 aa10.45□□□□□ -0.74
SCARB2-217ENST00000639324 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
SCARB2-217ENST00000639324 ESCO1Q5FWF5 840 aa10.45□□□□□ -0.74
SCARB2-217ENST00000639324 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
SCARB2-217ENST00000639324 CFHR5Q9BXR6 569 aa10.45□□□□□ -0.74
SCARB2-217ENST00000639324 RUBCNLQ9H714 662 aa10.45□□□□□ -0.74
SCARB2-217ENST00000639324 ITGB2P05107 769 aa10.44□□□□□ -0.74
SCARB2-217ENST00000639324 MSX1P28360 303 aa10.44□□□□□ -0.74
SCARB2-217ENST00000639324 TMEM214Q6NUQ4 689 aaKnown RBP10.44□□□□□ -0.74
SCARB2-217ENST00000639324 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-217ENST00000639324 ERICH6Q7L0X2 663 aa10.44□□□□□ -0.74
SCARB2-217ENST00000639324 PPARGC1BQ86YN6 1023 aaKnown RBP10.44□□□□□ -0.74
SCARB2-217ENST00000639324 LRRC4BQ9NT99 713 aa10.44□□□□□ -0.74
SCARB2-217ENST00000639324 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
SCARB2-217ENST00000639324 OIP5O43482 229 aa10.43□□□□□ -0.74
SCARB2-217ENST00000639324 ABL2P42684 1182 aa10.43□□□□□ -0.74
SCARB2-217ENST00000639324 GNASQ5JWF2 1037 aa10.43□□□□□ -0.74
SCARB2-217ENST00000639324 TLR1Q15399 786 aa10.42□□□□□ -0.74
SCARB2-217ENST00000639324 RHBDD1Q8TEB9 315 aa10.42□□□□□ -0.74
SCARB2-217ENST00000639324 OXCT2Q9BYC2 517 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-217ENST00000639324 PRM3Q9NNZ6 103 aa10.42□□□□□ -0.74
SCARB2-217ENST00000639324 NDFIP2Q9NV92 336 aa10.42□□□□□ -0.74
SCARB2-217ENST00000639324 SHISA8B8ZZ34 492 aa10.41□□□□□ -0.74
SCARB2-217ENST00000639324 MCM6Q14566 821 aa10.41□□□□□ -0.74
SCARB2-217ENST00000639324 NEDD1Q8NHV4 660 aa10.41□□□□□ -0.74
SCARB2-217ENST00000639324 KLRG1Q96E93 195 aa10.41□□□□□ -0.74
SCARB2-217ENST00000639324 DCAF5Q96JK2 942 aa10.41□□□□□ -0.74
SCARB2-217ENST00000639324 C2CD2LO14523 706 aa10.4□□□□□ -0.74
SCARB2-217ENST00000639324 INHAP05111 366 aa10.4□□□□□ -0.74
SCARB2-217ENST00000639324 MAP2K3P46734 347 aa10.4□□□□□ -0.74
SCARB2-217ENST00000639324 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.74
SCARB2-217ENST00000639324 ZNF295-AS1Q8N0V1 137 aa10.4□□□□□ -0.74
SCARB2-217ENST00000639324 PLPP7Q8NBV4 271 aa10.4□□□□□ -0.74
SCARB2-217ENST00000639324 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
SCARB2-217ENST00000639324 GDF10P55107 478 aa10.39□□□□□ -0.75
SCARB2-217ENST00000639324 SNRPNP63162 240 aaKnown RBP10.39□□□□□ -0.75
SCARB2-217ENST00000639324 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
SCARB2-217ENST00000639324 CRISPLD1Q9H336 500 aa10.39□□□□□ -0.75
SCARB2-217ENST00000639324 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
SCARB2-217ENST00000639324 HCN2Q9UL51 889 aa10.39□□□□□ -0.75
SCARB2-217ENST00000639324 PIK3CDO00329 1044 aa10.38□□□□□ -0.75
SCARB2-217ENST00000639324 BNIP3LO60238 219 aa10.38□□□□□ -0.75
SCARB2-217ENST00000639324 IGHA1P01876 353 aa10.38□□□□□ -0.75
SCARB2-217ENST00000639324 ATP4AP20648 1035 aa10.38□□□□□ -0.75
SCARB2-217ENST00000639324 PLA2G4EQ3MJ16 856 aa10.38□□□□□ -0.75
SCARB2-217ENST00000639324 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
SCARB2-217ENST00000639324 BEND7Q8N7W2 519 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-217ENST00000639324 PHF20L1A8MW92 1017 aa10.37□□□□□ -0.75
SCARB2-217ENST00000639324 TMEM229AB2RXF0 380 aa10.37□□□□□ -0.75
SCARB2-217ENST00000639324 GTF2E1P29083 439 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-217ENST00000639324 PLA2G4AP47712 749 aa10.37□□□□□ -0.75
SCARB2-217ENST00000639324 FOXK2Q01167 660 aa10.37□□□□□ -0.75
SCARB2-217ENST00000639324 ATXN7L1Q9ULK2 861 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-217ENST00000639324 CSB-PGBD3P0DP91 1061 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
SCARB2-217ENST00000639324 CTBSQ01459 385 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 WASHC4Q2M389 1173 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 MAP7D1Q3KQU3 841 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 PGBD3Q8N328 593 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 PHF24Q9UPV7 400 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 USP3Q9Y6I4 520 aa10.36□□□□□ -0.75
SCARB2-217ENST00000639324 GALNT6Q8NCL4 622 aa10.35□□□□□ -0.75
SCARB2-217ENST00000639324 IQSEC3Q9UPP2 1182 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-217ENST00000639324 COG6Q9Y2V7 657 aa10.35□□□□□ -0.75
SCARB2-217ENST00000639324 FGFR3P22607 806 aa10.34□□□□□ -0.75
SCARB2-217ENST00000639324 SMTNP53814 917 aa10.34□□□□□ -0.75
SCARB2-217ENST00000639324 EFHC2Q5JST6 749 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms