RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 TPD52L2O43399 206 aaKnown RBP10.41□□□□□ -0.74
SCARB2-209ENST00000638409 GTF2F1P35269 517 aaKnown RBP eCLIP10.41□□□□□ -0.74
SCARB2-209ENST00000638409 LDLRAD1Q5T700 205 aa10.41□□□□□ -0.74
SCARB2-209ENST00000638409 ANKLE2Q86XL3 938 aa10.41□□□□□ -0.74
SCARB2-209ENST00000638409 TSC1Q92574 1164 aa10.41□□□□□ -0.74
SCARB2-209ENST00000638409 SPACA7Q96KW9 195 aa10.41□□□□□ -0.74
SCARB2-209ENST00000638409 ABL1P00519 1130 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 HDGFP51858 240 aaKnown RBP10.4□□□□□ -0.74
SCARB2-209ENST00000638409 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 EXOC8Q8IYI6 725 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
SCARB2-209ENST00000638409 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 TLDC2A0PJX2 215 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 EGFLAMQ63HQ2 1017 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
SCARB2-209ENST00000638409 PRKAG2Q9UGJ0 569 aa10.4□□□□□ -0.74
SCARB2-209ENST00000638409 PEX14O75381 377 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 ATP2B4P23634 1241 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.39□□□□□ -0.75
SCARB2-209ENST00000638409 RIMS2Q9UQ26 1411 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 NEXMIFQ5QGS0 1516 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 PPP1R3GB7ZBB8 358 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 CD46P15529 392 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 LTKP29376 864 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 MYH16Q9H6N6 1097 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 EID1Q9Y6B2 187 aa10.39□□□□□ -0.75
SCARB2-209ENST00000638409 PARNO95453 639 aaKnown RBP10.38□□□□□ -0.75
SCARB2-209ENST00000638409 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-209ENST00000638409 NT5DC4Q86YG4 428 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 H3BRB1 525 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 TUT1Q9H6E5 874 aaKnown RBP10.38□□□□□ -0.75
SCARB2-209ENST00000638409 IFT172Q9UG01 1749 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 IQGAP1P46940 1657 aa10.38□□□□□ -0.75
SCARB2-209ENST00000638409 MAPK1P28482 360 aa10.37□□□□□ -0.75
SCARB2-209ENST00000638409 FAM161BQ96MY7 647 aa10.37□□□□□ -0.75
SCARB2-209ENST00000638409 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
SCARB2-209ENST00000638409 PPLO60437 1756 aa10.37□□□□□ -0.75
SCARB2-209ENST00000638409 NPHP4O75161 1426 aaPredicted RBP10.37□□□□□ -0.75
SCARB2-209ENST00000638409 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
SCARB2-209ENST00000638409 SDE2Q6IQ49 451 aa10.37□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L15C9J2P7 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L10C9JJH3 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L13C9JLJ4 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L12C9JPN9 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L11C9JVI0 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L21D6R901 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L18D6R9N7 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L22D6RA61 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L17D6RBQ6 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L19D6RCP7 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L20D6RJB6 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 PMFBP1Q8TBY8 1022 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 TBX22Q9Y458 520 aa10.36□□□□□ -0.75
SCARB2-209ENST00000638409 SETBP1Q9Y6X0 1596 aa10.35□□□□□ -0.75
SCARB2-209ENST00000638409 TNNI2P48788 182 aa10.35□□□□□ -0.75
SCARB2-209ENST00000638409 CLSPNQ9HAW4 1339 aa10.35□□□□□ -0.75
SCARB2-209ENST00000638409 MRPL58Q14197 206 aaKnown RBP10.34□□□□□ -0.75
SCARB2-209ENST00000638409 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
SCARB2-209ENST00000638409 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
SCARB2-209ENST00000638409 DIP2AQ14689 1571 aa10.34□□□□□ -0.75
SCARB2-209ENST00000638409 A0A0U1RQG5 324 aaPredicted RBP10.34□□□□□ -0.75
SCARB2-209ENST00000638409 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
SCARB2-209ENST00000638409 CLP1Q92989 425 aaKnown RBP10.34□□□□□ -0.75
SCARB2-209ENST00000638409 HLA-CQ95604 372 aa10.34□□□□□ -0.75
SCARB2-209ENST00000638409 MYOM2P54296 1465 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 hCG_2014768A0A024R1R8 64 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 DDX11L8A8MPP1 907 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 GUCA2AQ02747 115 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 PTPROQ16827 1216 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 METTL16Q86W50 562 aaKnown RBP10.33□□□□□ -0.76
SCARB2-209ENST00000638409 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 PCDHGA10Q9Y5H3 936 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 SOX11P35716 441 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 MTMR3Q13615 1198 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 NRXN3Q9Y4C0 1643 aa10.33□□□□□ -0.76
SCARB2-209ENST00000638409 PSME1Q06323 249 aa10.32□□□□□ -0.76
SCARB2-209ENST00000638409 GORABQ5T7V8 394 aa10.32□□□□□ -0.76
SCARB2-209ENST00000638409 ZSWIM4Q9H7M6 989 aa10.32□□□□□ -0.76
SCARB2-209ENST00000638409 PTK7Q13308 1070 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 CAPN10Q9HC96 672 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 RNF19AQ9NV58 838 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 ADAMTS13Q76LX8 1427 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 FAM196BA6NMK8 535 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 USP17L5A8MUK1 530 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-209ENST00000638409 RGL3Q3MIN7 710 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 ASB16Q96NS5 453 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 CUEDC1Q9NWM3 386 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-209ENST00000638409 IGBP1P78318 339 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 NR6A1Q15406 480 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
SCARB2-209ENST00000638409 MKRN1Q9UHC7 482 aaKnown RBP10.31□□□□□ -0.76
SCARB2-209ENST00000638409 PCDHGC3Q9UN70 934 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms