RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 ACTN2P35609 894 aa20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 CTR9Q6PD62 1173 aa20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 ABTB2Q8N961 1025 aa20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 DRC1Q96MC2 740 aa20.89■□□□□ 0.93
CACNA1A-247ENST00000637769 UBE4AQ14139 1066 aa20.88■□□□□ 0.93
CACNA1A-247ENST00000637769 HDGFL1Q5TGJ6 251 aa20.88■□□□□ 0.93
CACNA1A-247ENST00000637769 AMPD3Q01432 767 aa20.88■□□□□ 0.93
CACNA1A-247ENST00000637769 RBM5P52756 815 aaKnown RBP eCLIP20.88■□□□□ 0.93
CACNA1A-247ENST00000637769 AKAP2Q9Y2D5 859 aa20.88■□□□□ 0.93
CACNA1A-247ENST00000637769 TATP17735 454 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-247ENST00000637769 A0A087WZG4 1122 aa20.87■□□□□ 0.93
CACNA1A-247ENST00000637769 GOLIM4O00461 696 aa20.87■□□□□ 0.93
CACNA1A-247ENST00000637769 WDR63Q8IWG1 891 aa20.87■□□□□ 0.93
CACNA1A-247ENST00000637769 IVLP07476 585 aa20.87■□□□□ 0.93
CACNA1A-247ENST00000637769 KIF4BQ2VIQ3 1234 aa20.87■□□□□ 0.93
CACNA1A-247ENST00000637769 FERMT2Q96AC1 680 aa20.87■□□□□ 0.93
CACNA1A-247ENST00000637769 KANK3Q6NY19 840 aa20.86■□□□□ 0.93
CACNA1A-247ENST00000637769 CCDC12Q8WUD4 166 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-247ENST00000637769 NUP88Q99567 741 aaPredicted RBP20.86■□□□□ 0.93
CACNA1A-247ENST00000637769 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
CACNA1A-247ENST00000637769 SLF2Q8IX21 1173 aa20.86■□□□□ 0.93
CACNA1A-247ENST00000637769 RAB3IL1Q8TBN0 382 aa20.86■□□□□ 0.93
CACNA1A-247ENST00000637769 NLRP6P59044 892 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 FKBP4Q02790 459 aaKnown RBP eCLIP20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 RAB11FIP3O75154 756 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 SMARCC1Q92922 1105 aaPredicted RBP20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 PTPRGP23470 1445 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 HSPA4P34932 840 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 CUL5Q93034 780 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 SEPT6Q14141 434 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 USP37Q86T82 979 aa20.85■□□□□ 0.93
CACNA1A-247ENST00000637769 CTNNBL1Q8WYA6 563 aaPredicted RBP20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 PRPHP41219 470 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 STK3Q13188 491 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 PPP1R14CQ8TAE6 165 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 AIDAQ96BJ3 306 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 PAXBP1Q9Y5B6 917 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 MPHOSPH6Q99547 160 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 LRRC27Q9C0I9 530 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 CKAP4Q07065 602 aaKnown RBP20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 JPH4Q96JJ6 628 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 LRP2BPQ9P2M1 347 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 TICAM2Q86XR7 235 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 CCDC155Q8N6L0 562 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 TMEM87AQ8NBN3 555 aa20.84■□□□□ 0.93
CACNA1A-247ENST00000637769 IGHMBP2P38935 993 aaKnown RBP20.83■□□□□ 0.93
CACNA1A-247ENST00000637769 TTC14Q96N46 770 aa20.83■□□□□ 0.93
CACNA1A-247ENST00000637769 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.93
CACNA1A-247ENST00000637769 CEP126Q9P2H0 1117 aa20.83■□□□□ 0.93
CACNA1A-247ENST00000637769 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
CACNA1A-247ENST00000637769 HECW1Q76N89 1606 aa20.83■□□□□ 0.92
CACNA1A-247ENST00000637769 PPM1FP49593 454 aaPredicted RBP20.83■□□□□ 0.92
CACNA1A-247ENST00000637769 RNF187Q5TA31 235 aaPredicted RBP20.83■□□□□ 0.92
CACNA1A-247ENST00000637769 CASTP20810 708 aaKnown RBP20.83■□□□□ 0.92
CACNA1A-247ENST00000637769 AACSQ86V21 672 aa20.82■□□□□ 0.92
CACNA1A-247ENST00000637769 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
CACNA1A-247ENST00000637769 HLTFQ14527 1009 aaKnown RBP eCLIP20.82■□□□□ 0.92
CACNA1A-247ENST00000637769 ZSCAN29Q8IWY8 852 aaPredicted RBP20.82■□□□□ 0.92
CACNA1A-247ENST00000637769 ATF7IPQ6VMQ6 1270 aa20.82■□□□□ 0.92
CACNA1A-247ENST00000637769 CABP4P57796 275 aa20.82■□□□□ 0.92
CACNA1A-247ENST00000637769 RAI14Q9P0K7 980 aa20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 MTHFSP49914 203 aa20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 CFAP65Q6ZU64 1925 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 DAPK1P53355 1430 aa20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 JAKMIP1Q96N16 626 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 IQCGQ9H095 443 aaKnown RBP20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 RNF41Q9H4P4 317 aaPredicted RBP20.81■□□□□ 0.92
CACNA1A-247ENST00000637769 SLU7O95391 586 aaKnown RBP20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 BCCIPQ9P287 314 aaKnown RBP eCLIP20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 RASAL2Q9UJF2 1139 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 KDM4AO75164 1064 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 DNAAF4Q8WXU2 420 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 SLC4A2P04920 1241 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 SCLT1Q96NL6 688 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 PDZRN3Q9UPQ7 1066 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 HFM1A2PYH4 1435 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 IQCA1Q86XH1 822 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 TIGD1Q96MW7 591 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
CACNA1A-247ENST00000637769 CTCFLQ8NI51 663 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-247ENST00000637769 FGD6Q6ZV73 1430 aa20.79■□□□□ 0.92
CACNA1A-247ENST00000637769 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
CACNA1A-247ENST00000637769 FBF1Q8TES7 1133 aa20.79■□□□□ 0.92
CACNA1A-247ENST00000637769 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
CACNA1A-247ENST00000637769 MACROD2A1Z1Q3 448 aa20.79■□□□□ 0.92
CACNA1A-247ENST00000637769 NOL3O60936 208 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 KIF4AO95239 1232 aa20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 MCM4P33991 863 aa20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 STX1AQ16623 288 aa20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 HSF2BPO75031 334 aa20.78■□□□□ 0.92
CACNA1A-247ENST00000637769 MKRN1Q9UHC7 482 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms