RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
SMARCA2-260ENST00000637352 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
SMARCA2-260ENST00000637352 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
SMARCA2-260ENST00000637352 UBR3Q6ZT12 1888 aa11.48□□□□□ -0.57
SMARCA2-260ENST00000637352 ITGB4P16144 1822 aa11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 PHKG2P15735 406 aa11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 TGFB2P61812 414 aa11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 COL13A1Q5TAT6 717 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 C16orf71Q8IYS4 520 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 IFNL2Q8IZJ0 200 aa11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 SLC4A9Q96Q91 983 aa11.47□□□□□ -0.57
SMARCA2-260ENST00000637352 CICQ96RK0 1608 aaPredicted RBP11.46□□□□□ -0.57
SMARCA2-260ENST00000637352 CCDC87Q9NVE4 849 aa11.46□□□□□ -0.57
SMARCA2-260ENST00000637352 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
SMARCA2-260ENST00000637352 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.58
SMARCA2-260ENST00000637352 GYS1P13807 737 aa11.45□□□□□ -0.58
SMARCA2-260ENST00000637352 RFC4P35249 363 aa11.45□□□□□ -0.58
SMARCA2-260ENST00000637352 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
SMARCA2-260ENST00000637352 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
SMARCA2-260ENST00000637352 RRAGCQ9HB90 399 aa11.45□□□□□ -0.58
SMARCA2-260ENST00000637352 KCNA3P22001 575 aa11.44□□□□□ -0.58
SMARCA2-260ENST00000637352 KLRG1Q96E93 195 aa11.44□□□□□ -0.58
SMARCA2-260ENST00000637352 RNF181Q9P0P0 153 aa11.44□□□□□ -0.58
SMARCA2-260ENST00000637352 SRP68Q9UHB9 627 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-260ENST00000637352 MAP2P11137 1827 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-260ENST00000637352 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 PTCD1O75127 700 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 CHRNA5P30532 468 aa11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 KCPQ6ZWJ8 1503 aa11.43□□□□□ -0.58
SMARCA2-260ENST00000637352 KIF24Q5T7B8 1368 aa11.42□□□□□ -0.58
SMARCA2-260ENST00000637352 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
SMARCA2-260ENST00000637352 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
SMARCA2-260ENST00000637352 FKBP8Q14318 412 aa11.42□□□□□ -0.58
SMARCA2-260ENST00000637352 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
SMARCA2-260ENST00000637352 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
SMARCA2-260ENST00000637352 KDRP35968 1356 aa11.41□□□□□ -0.58
SMARCA2-260ENST00000637352 CABP4P57796 275 aa11.41□□□□□ -0.58
SMARCA2-260ENST00000637352 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
SMARCA2-260ENST00000637352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMARCA2-260ENST00000637352 KIF20BQ96Q89 1820 aa11.41□□□□□ -0.58
SMARCA2-260ENST00000637352 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
SMARCA2-260ENST00000637352 RASSF7Q02833 373 aa11.4□□□□□ -0.58
SMARCA2-260ENST00000637352 DDR1Q08345 913 aa11.4□□□□□ -0.58
SMARCA2-260ENST00000637352 TNS4Q8IZW8 715 aa11.4□□□□□ -0.58
SMARCA2-260ENST00000637352 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
SMARCA2-260ENST00000637352 ADRA2BP18089 450 aa11.39□□□□□ -0.59
SMARCA2-260ENST00000637352 CRKLP46109 303 aaKnown RBP11.39□□□□□ -0.59
SMARCA2-260ENST00000637352 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
SMARCA2-260ENST00000637352 RC3H1Q5TC82 1133 aaKnown RBP11.39□□□□□ -0.59
SMARCA2-260ENST00000637352 ZNF530Q6P9A1 599 aaPredicted RBP11.39□□□□□ -0.59
SMARCA2-260ENST00000637352 DCAF5Q96JK2 942 aa11.39□□□□□ -0.59
SMARCA2-260ENST00000637352 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
SMARCA2-260ENST00000637352 CNTNAP4Q9C0A0 1308 aa11.38□□□□□ -0.59
SMARCA2-260ENST00000637352 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
SMARCA2-260ENST00000637352 ERVV-2B6SEH9 535 aa11.38□□□□□ -0.59
SMARCA2-260ENST00000637352 FSTL1Q12841 308 aa11.38□□□□□ -0.59
SMARCA2-260ENST00000637352 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
SMARCA2-260ENST00000637352 MTHFSP49914 203 aa11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 JMYQ8N9B5 988 aa11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 NFATC2IPQ8NCF5 419 aa11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 PLEKHG2Q9H7P9 1386 aa11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
SMARCA2-260ENST00000637352 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
SMARCA2-260ENST00000637352 HSP90AB1P08238 724 aaKnown RBP11.36□□□□□ -0.59
SMARCA2-260ENST00000637352 USPL1Q5W0Q7 1092 aa11.36□□□□□ -0.59
SMARCA2-260ENST00000637352 SMC1BQ8NDV3 1235 aa11.36□□□□□ -0.59
SMARCA2-260ENST00000637352 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-260ENST00000637352 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-260ENST00000637352 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-260ENST00000637352 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
SMARCA2-260ENST00000637352 PRELPP51888 382 aa11.35□□□□□ -0.59
SMARCA2-260ENST00000637352 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
SMARCA2-260ENST00000637352 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-260ENST00000637352 DNAJC10Q8IXB1 793 aa11.34□□□□□ -0.59
SMARCA2-260ENST00000637352 ZNF219Q9P2Y4 722 aaPredicted RBP11.34□□□□□ -0.59
SMARCA2-260ENST00000637352 ZPR1O75312 459 aa11.33□□□□□ -0.6
SMARCA2-260ENST00000637352 TM4SF1P30408 202 aa11.33□□□□□ -0.6
SMARCA2-260ENST00000637352 SLC39A6Q13433 755 aa11.33□□□□□ -0.6
SMARCA2-260ENST00000637352 MYH14Q7Z406 1995 aaKnown RBP11.33□□□□□ -0.6
SMARCA2-260ENST00000637352 PCNTO95613 3336 aa11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 NFIXQ14938 502 aa11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 AMOTQ4VCS5 1084 aa11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 SULT6B1Q6IMI4 303 aa11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-260ENST00000637352 VEGFAP15692 232 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-260ENST00000637352 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
SMARCA2-260ENST00000637352 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
SMARCA2-260ENST00000637352 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-260ENST00000637352 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
SMARCA2-260ENST00000637352 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms