RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 ANKRD62A6NC57 917 aa7.1□□□□□ -1.27
SCN2A-213ENST00000636769 CCDC50Q8IVM0 306 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 CTCFLQ8NI51 663 aaPredicted RBP7.09□□□□□ -1.27
SCN2A-213ENST00000636769 PTPRGP23470 1445 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 CC2D2AQ9P2K1 1620 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 VPS36Q86VN1 386 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 PPM1EQ8WY54 764 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 PHAXQ9H814 394 aaKnown RBP7.09□□□□□ -1.27
SCN2A-213ENST00000636769 STAMBPO95630 424 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 EIF2S2P20042 333 aaKnown RBP7.09□□□□□ -1.27
SCN2A-213ENST00000636769 HSF2BPO75031 334 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 MICALL1Q8N3F8 863 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 JAKMIP1Q96N16 626 aaKnown RBP7.09□□□□□ -1.27
SCN2A-213ENST00000636769 LIMCH1Q9UPQ0 1083 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 CTAGE15A4D2H0 777 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 CTAGE8P0CG41 777 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 CTAGE6Q86UF2 777 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 CTAGE4Q8IX94 777 aa7.09□□□□□ -1.27
SCN2A-213ENST00000636769 SLC3A2P08195 630 aaKnown RBP7.09□□□□□ -1.28
SCN2A-213ENST00000636769 FKBP15Q5T1M5 1219 aa7.09□□□□□ -1.28
SCN2A-213ENST00000636769 BMP2KQ9NSY1 1161 aaPredicted RBP7.09□□□□□ -1.28
SCN2A-213ENST00000636769 NKTRP30414 1462 aaKnown RBP7.09□□□□□ -1.28
SCN2A-213ENST00000636769 MSL1Q68DK7 614 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 ANKS4BQ8N8V4 417 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 SH3BGRP55822 239 aaPredicted RBP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 GAS2L2Q8NHY3 880 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 ERO1AQ96HE7 468 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 ALDH1L2Q3SY69 923 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 FGFR1OPO95684 399 aaKnown RBP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 HMGB1P09429 215 aaKnown RBP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 GNG11P61952 73 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 PIP4K2BP78356 416 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 CCDC121Q6ZUS5 278 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 OTUD6BQ8N6M0 293 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 FYCO1Q9BQS8 1478 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 MTHFSP49914 203 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 GOLGA1Q92805 767 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 PYM1Q9BRP8 204 aaKnown RBP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 ABCC11Q96J66 1382 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 GOLIM4O00461 696 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 SKILP12757 684 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 KIF5BP33176 963 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 TUBB2AQ13885 445 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 ZSCAN25Q6NSZ9 544 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 TUBB2BQ9BVA1 445 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 STMN4Q9H169 189 aaPredicted RBP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 CAMK4Q16566 473 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 SPECC1Q5M775 1068 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 B4GALNT4Q76KP1 1039 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 NEUROD6Q96NK8 337 aa7.08□□□□□ -1.28
SCN2A-213ENST00000636769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCN2A-213ENST00000636769 TRMT1Q9NXH9 659 aaKnown RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 LIG1P18858 919 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 MX1P20591 662 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 SEPT6Q14141 434 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 UTP14CQ5TAP6 766 aaKnown RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 MYRIPQ8NFW9 859 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 TTC14Q96N46 770 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 SWAP70Q9UH65 585 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 CCDC9Q9Y3X0 531 aaKnown RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 TMCO5BA8MYB1 307 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 CCDC12Q8WUD4 166 aaPredicted RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 TANGO6Q9C0B7 1094 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 GPRASP1Q5JY77 1395 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 G3V3G9 751 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 KRT18P05783 430 aaKnown RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 DCAF8Q5TAQ9 597 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 TMC6Q7Z403 805 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 FAM114A1Q8IWE2 563 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 MYCBPQ99417 103 aaPredicted RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 MKRN1Q9UHC7 482 aaKnown RBP7.07□□□□□ -1.28
SCN2A-213ENST00000636769 RAB11FIP3O75154 756 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 FMNL3Q8IVF7 1028 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 SMC5Q8IY18 1101 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 CEP63Q96MT8 703 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 NACAP1Q9BZK3 213 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 CEP83Q9Y592 693 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 RAI14Q9P0K7 980 aa7.07□□□□□ -1.28
SCN2A-213ENST00000636769 ATAD2Q6PL18 1390 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 STX6O43752 255 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 KANK3Q6NY19 840 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 ATP2B1P20020 1258 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 CASTP20810 708 aaKnown RBP7.06□□□□□ -1.28
SCN2A-213ENST00000636769 DAAM2Q86T65 1068 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 C10orf67Q8IYJ2 551 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 PANK2Q9BZ23 570 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 EID1Q9Y6B2 187 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.06□□□□□ -1.28
SCN2A-213ENST00000636769 FBF1Q8TES7 1133 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 ANKRD18BA2A2Z9 1011 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 HDXQ7Z353 690 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 GLRX3O76003 335 aaKnown RBP7.06□□□□□ -1.28
SCN2A-213ENST00000636769 RIC3Q7Z5B4 369 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 VPS37DQ86XT2 251 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 ZSCAN16Q9H4T2 348 aaPredicted RBP7.06□□□□□ -1.28
SCN2A-213ENST00000636769 ANKRD50Q9ULJ7 1429 aa7.06□□□□□ -1.28
SCN2A-213ENST00000636769 DDX46Q7L014 1031 aaKnown RBP7.06□□□□□ -1.28
SCN2A-213ENST00000636769 ANAPC15P60006 121 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms