RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 LILRA1O75019 489 aa8.83□□□□□ -1
CLN8-210ENST00000636605 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
CLN8-210ENST00000636605 ZNF784Q8NCA9 323 aaPredicted RBP8.83□□□□□ -1
CLN8-210ENST00000636605 ABCA9Q8IUA7 1624 aa8.83□□□□□ -1
CLN8-210ENST00000636605 TROQ12816 1431 aaPredicted RBP8.82□□□□□ -1
CLN8-210ENST00000636605 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
CLN8-210ENST00000636605 SEPT12Q8IYM1 358 aa8.82□□□□□ -1
CLN8-210ENST00000636605 TMPRSS4Q9NRS4 437 aa8.82□□□□□ -1
CLN8-210ENST00000636605 TSPOAP1O95153 1857 aa8.82□□□□□ -1
CLN8-210ENST00000636605 KDM6BO15054 1643 aa8.81□□□□□ -1
CLN8-210ENST00000636605 ZBBXA8MT70 800 aa8.81□□□□□ -1
CLN8-210ENST00000636605 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
CLN8-210ENST00000636605 FBXO45P0C2W1 286 aa8.81□□□□□ -1
CLN8-210ENST00000636605 KDF1Q8NAX2 398 aaPredicted RBP8.81□□□□□ -1
CLN8-210ENST00000636605 AGBL1Q96MI9 1066 aa8.81□□□□□ -1
CLN8-210ENST00000636605 NEO1Q92859 1461 aa8.81□□□□□ -1
CLN8-210ENST00000636605 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
CLN8-210ENST00000636605 CDK13Q14004 1512 aaKnown RBP8.8□□□□□ -1
CLN8-210ENST00000636605 ADH1AP07327 375 aa8.8□□□□□ -1
CLN8-210ENST00000636605 PTSQ03393 145 aa8.8□□□□□ -1
CLN8-210ENST00000636605 ZSCAN1Q8NBB4 408 aa8.8□□□□□ -1
CLN8-210ENST00000636605 BANK1Q8NDB2 785 aa8.8□□□□□ -1
CLN8-210ENST00000636605 KIF14Q15058 1648 aa8.8□□□□□ -1
CLN8-210ENST00000636605 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
CLN8-210ENST00000636605 MTUS2Q5JR59 1369 aa8.79□□□□□ -1
CLN8-210ENST00000636605 CTSOP43234 321 aaPredicted RBP8.79□□□□□ -1
CLN8-210ENST00000636605 EFCAB2Q5VUJ9 269 aa8.79□□□□□ -1
CLN8-210ENST00000636605 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
CLN8-210ENST00000636605 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
CLN8-210ENST00000636605 ADD1P35611 737 aaKnown RBP8.78□□□□□ -1
CLN8-210ENST00000636605 RELBQ01201 579 aa8.78□□□□□ -1
CLN8-210ENST00000636605 RNF217Q8TC41 542 aa8.78□□□□□ -1
CLN8-210ENST00000636605 INSM2Q96T92 566 aaPredicted RBP8.78□□□□□ -1
CLN8-210ENST00000636605 ARAP3Q8WWN8 1544 aa8.78□□□□□ -1
CLN8-210ENST00000636605 PLCH2O75038 1416 aa8.78□□□□□ -1
CLN8-210ENST00000636605 PPRC1Q5VV67 1664 aaKnown RBP8.78□□□□□ -1
CLN8-210ENST00000636605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLN8-210ENST00000636605 FANCAO15360 1455 aa8.77□□□□□ -1.01
CLN8-210ENST00000636605 MAP3K1Q13233 1512 aa8.76□□□□□ -1.01
CLN8-210ENST00000636605 SLC35F4A4IF30 521 aa8.76□□□□□ -1.01
CLN8-210ENST00000636605 RAB15P59190 212 aa8.76□□□□□ -1.01
CLN8-210ENST00000636605 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
CLN8-210ENST00000636605 NANOS1Q8WY41 292 aaKnown RBP8.76□□□□□ -1.01
CLN8-210ENST00000636605 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
CLN8-210ENST00000636605 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
CLN8-210ENST00000636605 MYO5CQ9NQX4 1742 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 AKNAQ7Z591 1439 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
CLN8-210ENST00000636605 PTGIRP43119 386 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 KRT76Q01546 638 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 NR1H3Q13133 447 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 CCDC125Q86Z20 511 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 ZNF395Q9H8N7 513 aaPredicted RBP8.74□□□□□ -1.01
CLN8-210ENST00000636605 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 PCDHB9Q9Y5E1 797 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 EHBP1L1Q8N3D4 1523 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 LRRIQ1Q96JM4 1722 aa8.74□□□□□ -1.01
CLN8-210ENST00000636605 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
CLN8-210ENST00000636605 DENND4BO75064 1496 aaPredicted RBP8.73□□□□□ -1.01
CLN8-210ENST00000636605 ERVK-9P63128 1117 aa8.73□□□□□ -1.01
CLN8-210ENST00000636605 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
CLN8-210ENST00000636605 POLMQ9NP87 494 aaPredicted RBP8.73□□□□□ -1.01
CLN8-210ENST00000636605 NDUFB9Q9Y6M9 179 aa8.73□□□□□ -1.01
CLN8-210ENST00000636605 TTC37Q6PGP7 1564 aa8.73□□□□□ -1.01
CLN8-210ENST00000636605 ARHGAP5Q13017 1502 aa8.72□□□□□ -1.01
CLN8-210ENST00000636605 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
CLN8-210ENST00000636605 SNRKQ9NRH2 765 aa8.72□□□□□ -1.01
CLN8-210ENST00000636605 CFDP1Q9UEE9 299 aaPredicted RBP8.72□□□□□ -1.01
CLN8-210ENST00000636605 ADGRL1O94910 1474 aa8.71□□□□□ -1.01
CLN8-210ENST00000636605 PLEKHH2Q8IVE3 1493 aa8.71□□□□□ -1.01
CLN8-210ENST00000636605 TIAM1Q13009 1591 aa8.71□□□□□ -1.02
CLN8-210ENST00000636605 ITGA6P23229 1130 aa8.71□□□□□ -1.02
CLN8-210ENST00000636605 SCAPERQ9BY12 1400 aa8.71□□□□□ -1.02
CLN8-210ENST00000636605 MAGI2Q86UL8 1455 aa8.7□□□□□ -1.02
CLN8-210ENST00000636605 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
CLN8-210ENST00000636605 RAPGEF3O95398 923 aa8.7□□□□□ -1.02
CLN8-210ENST00000636605 TRIM52Q96A61 297 aa8.7□□□□□ -1.02
CLN8-210ENST00000636605 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
CLN8-210ENST00000636605 SUPT6HQ7KZ85 1726 aaKnown RBP8.69□□□□□ -1.02
CLN8-210ENST00000636605 APBB1O00213 710 aa8.69□□□□□ -1.02
CLN8-210ENST00000636605 RNF144AP50876 292 aaPredicted RBP8.69□□□□□ -1.02
CLN8-210ENST00000636605 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
CLN8-210ENST00000636605 ZNF518AQ6AHZ1 1483 aa8.69□□□□□ -1.02
CLN8-210ENST00000636605 GPATCH8Q9UKJ3 1502 aaKnown RBP8.69□□□□□ -1.02
CLN8-210ENST00000636605 PREX2Q70Z35 1606 aa8.69□□□□□ -1.02
CLN8-210ENST00000636605 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
CLN8-210ENST00000636605 RNF20Q5VTR2 975 aa8.68□□□□□ -1.02
CLN8-210ENST00000636605 KIAA1107Q9UPP5 1409 aa8.68□□□□□ -1.02
CLN8-210ENST00000636605 ITSN2Q9NZM3 1697 aa8.68□□□□□ -1.02
CLN8-210ENST00000636605 SCTRP47872 440 aa8.67□□□□□ -1.02
CLN8-210ENST00000636605 RNFT1Q5M7Z0 435 aa8.67□□□□□ -1.02
CLN8-210ENST00000636605 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
CLN8-210ENST00000636605 POGZQ7Z3K3 1410 aa8.67□□□□□ -1.02
CLN8-210ENST00000636605 ZNF777Q9ULD5 760 aaPredicted RBP8.67□□□□□ -1.02
CLN8-210ENST00000636605 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
CLN8-210ENST00000636605 NCOA2Q15596 1464 aa8.66□□□□□ -1.02
CLN8-210ENST00000636605 TRAK2O60296 914 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms