RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
CLN5-212ENST00000636602 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
CLN5-212ENST00000636602 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
CLN5-212ENST00000636602 TAS1R3Q7RTX0 852 aa8.6□□□□□ -1.03
CLN5-212ENST00000636602 CLN3Q13286 438 aa8.59□□□□□ -1.03
CLN5-212ENST00000636602 ERVK-9P63128 1117 aa8.58□□□□□ -1.04
CLN5-212ENST00000636602 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
CLN5-212ENST00000636602 SLCO4C1Q6ZQN7 724 aa8.58□□□□□ -1.04
CLN5-212ENST00000636602 NOP53Q9NZM5 478 aaKnown RBP8.58□□□□□ -1.04
CLN5-212ENST00000636602 C2CD2LO14523 706 aa8.57□□□□□ -1.04
CLN5-212ENST00000636602 GIGYF1O75420 1035 aaPredicted RBP8.57□□□□□ -1.04
CLN5-212ENST00000636602 CC2D2BQ6DHV5 1058 aa8.57□□□□□ -1.04
CLN5-212ENST00000636602 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
CLN5-212ENST00000636602 GPAMQ9HCL2 828 aa8.57□□□□□ -1.04
CLN5-212ENST00000636602 GGA1Q9UJY5 639 aa8.57□□□□□ -1.04
CLN5-212ENST00000636602 BMP4P12644 408 aa8.56□□□□□ -1.04
CLN5-212ENST00000636602 KDM4CQ9H3R0 1056 aa8.56□□□□□ -1.04
CLN5-212ENST00000636602 DGKGP49619 791 aa8.55□□□□□ -1.04
CLN5-212ENST00000636602 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
CLN5-212ENST00000636602 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
CLN5-212ENST00000636602 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
CLN5-212ENST00000636602 AP1G2O75843 785 aa8.54□□□□□ -1.04
CLN5-212ENST00000636602 EPXP11678 715 aa8.54□□□□□ -1.04
CLN5-212ENST00000636602 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
CLN5-212ENST00000636602 HMX1Q9NP08 348 aaPredicted RBP8.54□□□□□ -1.04
CLN5-212ENST00000636602 ATXN7L1Q9ULK2 861 aaPredicted RBP8.54□□□□□ -1.04
CLN5-212ENST00000636602 SCO2A0A1W2PP80 73 aa8.53□□□□□ -1.04
CLN5-212ENST00000636602 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
CLN5-212ENST00000636602 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
CLN5-212ENST00000636602 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
CLN5-212ENST00000636602 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
CLN5-212ENST00000636602 GATA4P43694 442 aa8.52□□□□□ -1.05
CLN5-212ENST00000636602 PHKA2P46019 1235 aa8.51□□□□□ -1.05
CLN5-212ENST00000636602 CTBSQ01459 385 aa8.51□□□□□ -1.05
CLN5-212ENST00000636602 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
CLN5-212ENST00000636602 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
CLN5-212ENST00000636602 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.51□□□□□ -1.05
CLN5-212ENST00000636602 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
CLN5-212ENST00000636602 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
CLN5-212ENST00000636602 TRAK2O60296 914 aa8.5□□□□□ -1.05
CLN5-212ENST00000636602 FGFR3P22607 806 aa8.5□□□□□ -1.05
CLN5-212ENST00000636602 SCTRP47872 440 aa8.5□□□□□ -1.05
CLN5-212ENST00000636602 RSPO4Q2I0M5 234 aaPredicted RBP8.5□□□□□ -1.05
CLN5-212ENST00000636602 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
CLN5-212ENST00000636602 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
CLN5-212ENST00000636602 NDFIP2Q9NV92 336 aa8.5□□□□□ -1.05
CLN5-212ENST00000636602 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
CLN5-212ENST00000636602 CSB-PGBD3P0DP91 1061 aa8.49□□□□□ -1.05
CLN5-212ENST00000636602 ARAFP10398 606 aa8.49□□□□□ -1.05
CLN5-212ENST00000636602 RNF20Q5VTR2 975 aa8.49□□□□□ -1.05
CLN5-212ENST00000636602 PGBD3Q8N328 593 aa8.49□□□□□ -1.05
CLN5-212ENST00000636602 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
CLN5-212ENST00000636602 RUBCNLQ9H714 662 aa8.49□□□□□ -1.05
CLN5-212ENST00000636602 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 BNIP3LO60238 219 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 USP17L8P0C7I0 530 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 CENPCQ03188 943 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 ARTNQ5T4W7 220 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 ARXQ96QS3 562 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 ZFP64Q9NPA5 681 aa8.48□□□□□ -1.05
CLN5-212ENST00000636602 NEURL1BA8MQ27 555 aa8.47□□□□□ -1.05
CLN5-212ENST00000636602 CHSY3Q70JA7 882 aa8.47□□□□□ -1.05
CLN5-212ENST00000636602 CNKSR1Q969H4 720 aa8.47□□□□□ -1.05
CLN5-212ENST00000636602 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
CLN5-212ENST00000636602 RAB6BQ9NRW1 208 aa8.47□□□□□ -1.05
CLN5-212ENST00000636602 ZBBXA8MT70 800 aa8.46□□□□□ -1.06
CLN5-212ENST00000636602 IL2RAP01589 272 aa8.46□□□□□ -1.06
CLN5-212ENST00000636602 MSX1P28360 303 aa8.46□□□□□ -1.06
CLN5-212ENST00000636602 ZSCAN10Q96SZ4 725 aaPredicted RBP8.46□□□□□ -1.06
CLN5-212ENST00000636602 GNRH1P01148 92 aa8.45□□□□□ -1.06
CLN5-212ENST00000636602 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
CLN5-212ENST00000636602 SPATA31C1P0DKV0 1188 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 FAM117AQ9C073 453 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
CLN5-212ENST00000636602 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
CLN5-212ENST00000636602 PCDHB11Q9Y5F2 797 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 HRH3Q9Y5N1 445 aa8.44□□□□□ -1.06
CLN5-212ENST00000636602 SUPT5HO00267 1087 aaKnown RBP8.43□□□□□ -1.06
CLN5-212ENST00000636602 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
CLN5-212ENST00000636602 PLVAPQ9BX97 442 aa8.43□□□□□ -1.06
CLN5-212ENST00000636602 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
CLN5-212ENST00000636602 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
CLN5-212ENST00000636602 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
CLN5-212ENST00000636602 FHDC1Q9C0D6 1143 aaPredicted RBP8.42□□□□□ -1.06
CLN5-212ENST00000636602 CRISPLD1Q9H336 500 aa8.42□□□□□ -1.06
CLN5-212ENST00000636602 TPSG1Q9NRR2 321 aa8.42□□□□□ -1.06
CLN5-212ENST00000636602 KRTAP4-8A0A0G2JLE6 195 aa8.41□□□□□ -1.06
CLN5-212ENST00000636602 DYRK3O43781 588 aa8.41□□□□□ -1.06
CLN5-212ENST00000636602 GTF2E1P29083 439 aaPredicted RBP8.41□□□□□ -1.06
CLN5-212ENST00000636602 TMEM214Q6NUQ4 689 aaKnown RBP8.41□□□□□ -1.06
CLN5-212ENST00000636602 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
CLN5-212ENST00000636602 KLF15Q9UIH9 416 aa8.41□□□□□ -1.06
CLN5-212ENST00000636602 ADH6P28332 368 aa8.4□□□□□ -1.06
CLN5-212ENST00000636602 XAGE2Q96GT9 111 aa8.4□□□□□ -1.06
CLN5-212ENST00000636602 MCCD1P59942 119 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms