RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PLEKHG2Q9H7P9 1386 aa25.68■■□□□ 1.7
CLN6-212ENST00000636020 HSP90AB2PQ58FF8 381 aa25.67■■□□□ 1.7
CLN6-212ENST00000636020 NLGN1Q8N2Q7 840 aa25.66■■□□□ 1.7
CLN6-212ENST00000636020 INSRP06213 1382 aa25.66■■□□□ 1.7
CLN6-212ENST00000636020 KDM2BQ8NHM5 1336 aa25.65■■□□□ 1.7
CLN6-212ENST00000636020 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
CLN6-212ENST00000636020 KCPQ6ZWJ8 1503 aa25.64■■□□□ 1.7
CLN6-212ENST00000636020 KCNA3P22001 575 aa25.64■■□□□ 1.7
CLN6-212ENST00000636020 ATP6V1AP38606 617 aa25.64■■□□□ 1.7
CLN6-212ENST00000636020 TMF1P82094 1093 aa25.64■■□□□ 1.7
CLN6-212ENST00000636020 RRAGCQ9HB90 399 aa25.64■■□□□ 1.7
CLN6-212ENST00000636020 ASAP1Q9ULH1 1129 aa25.64■■□□□ 1.7
CLN6-212ENST00000636020 CCDC87Q9NVE4 849 aa25.63■■□□□ 1.69
CLN6-212ENST00000636020 BRCA1P38398 1863 aaKnown RBP25.63■■□□□ 1.69
CLN6-212ENST00000636020 FYB1O15117 783 aa25.62■■□□□ 1.69
CLN6-212ENST00000636020 PKD1L3Q7Z443 1732 aa25.61■■□□□ 1.69
CLN6-212ENST00000636020 TRAPPC3LQ5T215 181 aa25.61■■□□□ 1.69
CLN6-212ENST00000636020 GGNBP2Q9H3C7 697 aa25.61■■□□□ 1.69
CLN6-212ENST00000636020 SMC1BQ8NDV3 1235 aa25.6■■□□□ 1.69
CLN6-212ENST00000636020 TMOD3Q9NYL9 352 aa25.6■■□□□ 1.69
CLN6-212ENST00000636020 ARFGEF1Q9Y6D6 1849 aa25.59■■□□□ 1.69
CLN6-212ENST00000636020 HSPA1AP0DMV8 641 aaKnown RBP25.59■■□□□ 1.69
CLN6-212ENST00000636020 HSPA1BP0DMV9 641 aaKnown RBP25.59■■□□□ 1.69
CLN6-212ENST00000636020 DCAF5Q96JK2 942 aa25.59■■□□□ 1.69
CLN6-212ENST00000636020 RTCBQ9Y3I0 505 aaKnown RBP25.59■■□□□ 1.69
CLN6-212ENST00000636020 FLT4P35916 1363 aa25.58■■□□□ 1.69
CLN6-212ENST00000636020 ARHGEF1Q92888 912 aaKnown RBP25.58■■□□□ 1.69
CLN6-212ENST00000636020 RNF181Q9P0P0 153 aa25.58■■□□□ 1.69
CLN6-212ENST00000636020 GYS1P13807 737 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 TESK2Q96S53 571 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 ATG3Q9NT62 314 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 PIM2Q9P1W9 311 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 SPG7Q9UQ90 795 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 PARP3Q9Y6F1 533 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 C4AP0C0L4 1744 aa25.57■■□□□ 1.68
CLN6-212ENST00000636020 KIF24Q5T7B8 1368 aa25.56■■□□□ 1.68
CLN6-212ENST00000636020 ADRA2BP18089 450 aa25.55■■□□□ 1.68
CLN6-212ENST00000636020 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
CLN6-212ENST00000636020 DALRD3Q5D0E6 543 aaKnown RBP25.54■■□□□ 1.68
CLN6-212ENST00000636020 TNRC6CQ9HCJ0 1690 aaKnown RBP25.54■■□□□ 1.68
CLN6-212ENST00000636020 RC3H1Q5TC82 1133 aaKnown RBP25.53■■□□□ 1.68
CLN6-212ENST00000636020 SLC4A9Q96Q91 983 aa25.52■■□□□ 1.68
CLN6-212ENST00000636020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.52■■□□□ 1.68
CLN6-212ENST00000636020 KDRP35968 1356 aa25.52■■□□□ 1.68
CLN6-212ENST00000636020 RFC4P35249 363 aa25.51■■□□□ 1.67
CLN6-212ENST00000636020 SBF1O95248 1867 aa25.49■■□□□ 1.67
CLN6-212ENST00000636020 RPS6KA4O75676 772 aa25.49■■□□□ 1.67
CLN6-212ENST00000636020 PHKG2P15735 406 aa25.49■■□□□ 1.67
CLN6-212ENST00000636020 IFNL2Q8IZJ0 200 aa25.48■■□□□ 1.67
CLN6-212ENST00000636020 TONSLQ96HA7 1378 aa25.47■■□□□ 1.67
CLN6-212ENST00000636020 CNTNAP4Q9C0A0 1308 aa25.47■■□□□ 1.67
CLN6-212ENST00000636020 ST20-MTHFSA0A0A6YYL1 179 aa25.47■■□□□ 1.67
CLN6-212ENST00000636020 EMILIN1Q9Y6C2 1016 aa25.47■■□□□ 1.67
CLN6-212ENST00000636020 ZC3H4Q9UPT8 1303 aaKnown RBP25.45■■□□□ 1.66
CLN6-212ENST00000636020 SLC24A1O60721 1099 aa25.45■■□□□ 1.66
CLN6-212ENST00000636020 VEGFAP15692 232 aaPredicted RBP25.45■■□□□ 1.66
CLN6-212ENST00000636020 RBM42Q9BTD8 480 aaKnown RBP25.45■■□□□ 1.66
CLN6-212ENST00000636020 ZNF831Q5JPB2 1677 aa25.45■■□□□ 1.66
CLN6-212ENST00000636020 SLC34A2O95436 690 aa25.44■■□□□ 1.66
CLN6-212ENST00000636020 CHRNA5P30532 468 aa25.44■■□□□ 1.66
CLN6-212ENST00000636020 EYA1Q99502 592 aa25.44■■□□□ 1.66
CLN6-212ENST00000636020 GLTPD2A6NH11 291 aa25.42■■□□□ 1.66
CLN6-212ENST00000636020 DDR1Q08345 913 aa25.42■■□□□ 1.66
CLN6-212ENST00000636020 COL5A3P25940 1745 aaPredicted RBP25.42■■□□□ 1.66
CLN6-212ENST00000636020 MYH14Q7Z406 1995 aaKnown RBP25.42■■□□□ 1.66
CLN6-212ENST00000636020 KDM6AO15550 1401 aaPredicted RBP25.41■■□□□ 1.66
CLN6-212ENST00000636020 FKBP8Q14318 412 aa25.41■■□□□ 1.66
CLN6-212ENST00000636020 RASSF7Q02833 373 aa25.4■■□□□ 1.66
CLN6-212ENST00000636020 SRP68Q9UHB9 627 aaKnown RBP25.4■■□□□ 1.66
CLN6-212ENST00000636020 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.66
CLN6-212ENST00000636020 WASHC2AQ641Q2 1341 aa25.38■■□□□ 1.65
CLN6-212ENST00000636020 PPM1GO15355 546 aaPredicted RBP25.38■■□□□ 1.65
CLN6-212ENST00000636020 LMNB1P20700 586 aa25.38■■□□□ 1.65
CLN6-212ENST00000636020 KIF20BQ96Q89 1820 aa25.37■■□□□ 1.65
CLN6-212ENST00000636020 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
CLN6-212ENST00000636020 POLRMTO00411 1230 aaKnown RBP25.35■■□□□ 1.65
CLN6-212ENST00000636020 TM4SF1P30408 202 aa25.35■■□□□ 1.65
CLN6-212ENST00000636020 POTECB2RU33 542 aa25.34■■□□□ 1.65
CLN6-212ENST00000636020 CRKLP46109 303 aaKnown RBP25.34■■□□□ 1.65
CLN6-212ENST00000636020 CARD14Q9BXL6 1004 aa25.31■■□□□ 1.64
CLN6-212ENST00000636020 ANKRD26Q9UPS8 1709 aa25.31■■□□□ 1.64
CLN6-212ENST00000636020 HSP90AB1P08238 724 aaKnown RBP25.3■■□□□ 1.64
CLN6-212ENST00000636020 PRDM10Q9NQV6 1147 aa25.3■■□□□ 1.64
CLN6-212ENST00000636020 CREBZFQ9NS37 354 aa25.3■■□□□ 1.64
CLN6-212ENST00000636020 FOXN1O15353 648 aa25.29■■□□□ 1.64
CLN6-212ENST00000636020 PTCD1O75127 700 aaKnown RBP25.29■■□□□ 1.64
CLN6-212ENST00000636020 MKRN1Q9UHC7 482 aaKnown RBP25.29■■□□□ 1.64
CLN6-212ENST00000636020 CABP4P57796 275 aa25.28■■□□□ 1.64
CLN6-212ENST00000636020 INTS5Q6P9B9 1019 aaKnown RBP25.26■■□□□ 1.63
CLN6-212ENST00000636020 POLKQ9UBT6 870 aa25.26■■□□□ 1.63
CLN6-212ENST00000636020 NFKBIEO00221 500 aa25.25■■□□□ 1.63
CLN6-212ENST00000636020 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
CLN6-212ENST00000636020 TTLL6Q8N841 843 aa25.25■■□□□ 1.63
CLN6-212ENST00000636020 CCDC88AQ3V6T2 1871 aa25.25■■□□□ 1.63
CLN6-212ENST00000636020 TIAM2Q8IVF5 1701 aa25.24■■□□□ 1.63
CLN6-212ENST00000636020 DPY19L2Q6NUT2 758 aa25.24■■□□□ 1.63
CLN6-212ENST00000636020 ADAMTS7Q9UKP4 1686 aa25.23■■□□□ 1.63
CLN6-212ENST00000636020 ZPR1O75312 459 aa25.23■■□□□ 1.63
CLN6-212ENST00000636020 USPL1Q5W0Q7 1092 aa25.23■■□□□ 1.63
CLN6-212ENST00000636020 CHADLQ6NUI6 762 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms