RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 ATXN8OSP0DMR3 200 aa20.29■□□□□ 0.84
CACNA1A-215ENST00000635727 DNAI2Q9GZS0 605 aa20.29■□□□□ 0.84
CACNA1A-215ENST00000635727 TRMT1Q9NXH9 659 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-215ENST00000635727 HLTFQ14527 1009 aaKnown RBP eCLIP20.29■□□□□ 0.84
CACNA1A-215ENST00000635727 CASTP20810 708 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-215ENST00000635727 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
CACNA1A-215ENST00000635727 IGHMBP2P38935 993 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 TCERG1LQ5VWI1 586 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 UACAQ9BZF9 1416 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 PRC1O43663 620 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 WDHD1O75717 1129 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 PROCA1Q8NCQ7 364 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 PPP1R14CQ8TAE6 165 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 PRKCSHP14314 528 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 BICD1Q96G01 975 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 PDZRN3Q9UPQ7 1066 aa20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-215ENST00000635727 ZPR1O75312 459 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 GJC1P36383 396 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 EXOSC9Q06265 439 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 TSG101Q99816 390 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 FMN1Q68DA7 1419 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 TWISTNBQ3B726 338 aaPredicted RBP20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
CACNA1A-215ENST00000635727 NOP2P46087 812 aaKnown RBP20.27■□□□□ 0.83
CACNA1A-215ENST00000635727 SYCP3Q8IZU3 236 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 FAM212AQ96EL1 285 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 AKNAD1Q5T1N1 836 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 FERMT3Q86UX7 667 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 KRT85P78386 507 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 SHTN1A0MZ66 631 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 SULT6B1Q6IMI4 303 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 CLEC11AQ9Y240 323 aa20.26■□□□□ 0.83
CACNA1A-215ENST00000635727 CFAP58Q5T655 872 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 TMEM110-MUSTN1A8MSY1 372 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 FEZ1Q99689 392 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 GNAI3P08754 354 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 SPATA24Q86W54 205 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 RAB3IL1Q8TBN0 382 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 CDCA7LQ96GN5 454 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 PKNOX2Q96KN3 472 aa20.25■□□□□ 0.83
CACNA1A-215ENST00000635727 MXRA7P84157 204 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 CUL5Q93034 780 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 TSNARE1Q96NA8 513 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 SYNCQ9H7C4 482 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 CKAP2LQ8IYA6 745 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 PANK2Q9BZ23 570 aa20.24■□□□□ 0.83
CACNA1A-215ENST00000635727 SIRT1Q96EB6 747 aa20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 FHOD3Q2V2M9 1422 aa20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 NUP62CLQ9H1M0 184 aa20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 URI1O94763 535 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 FKBP15Q5T1M5 1219 aa20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 GCOM1H8Y6P7 765 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 MYZAPP0CAP1 466 aa20.23■□□□□ 0.83
CACNA1A-215ENST00000635727 SRGAP3O43295 1099 aa20.22■□□□□ 0.83
CACNA1A-215ENST00000635727 RRS1Q15050 365 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-215ENST00000635727 CCDC83Q8IWF9 413 aa20.22■□□□□ 0.83
CACNA1A-215ENST00000635727 KIF4BQ2VIQ3 1234 aa20.22■□□□□ 0.83
CACNA1A-215ENST00000635727 MAATS1Q7Z4T9 603 aa20.22■□□□□ 0.83
CACNA1A-215ENST00000635727 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 PLS1Q14651 629 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 ANKRD1Q15327 319 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 SYCE3A1L190 88 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 MYO1BO43795 1136 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 NLRP5P59047 1200 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 ZSWIM4Q9H7M6 989 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 SMARCA5O60264 1052 aaPredicted RBP20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 CCDC63Q8NA47 563 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 A0A1W2PRG0 241 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 LRSAM1Q6UWE0 723 aa20.21■□□□□ 0.83
CACNA1A-215ENST00000635727 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 GAS2L2Q8NHY3 880 aa20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 CDKL5O76039 1030 aa20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 MBD3O95983 291 aa20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 IMMTQ16891 758 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 ANKRD18BA2A2Z9 1011 aa20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 GIGYF2Q6Y7W6 1299 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 BIN1O00499 593 aa20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-215ENST00000635727 MPRIPQ6WCQ1 1025 aa20.19■□□□□ 0.82
CACNA1A-215ENST00000635727 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
CACNA1A-215ENST00000635727 TTC36A6NLP5 189 aa20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 UBXN4Q92575 508 aa20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 BOLA2Q9H3K6 86 aa20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 CAVIN4Q5BKX8 364 aa20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 F8W031 263 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
CACNA1A-215ENST00000635727 HSP90AA4PQ58FG1 418 aa20.17■□□□□ 0.82
CACNA1A-215ENST00000635727 CEP131Q9UPN4 1083 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms