RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 GGA1Q9UJY5 639 aa6□□□□□ -1.45
SMARCB1-208ENST00000634926 DGKGP49619 791 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 WDR44Q5JSH3 913 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 TAS1R3Q7RTX0 852 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 NLRP3Q96P20 1036 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 TRIM34Q9BYJ4 488 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 OSBPL3Q9H4L5 887 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 RAB6BQ9NRW1 208 aa5.99□□□□□ -1.45
SMARCB1-208ENST00000634926 TRAK2O60296 914 aa5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 CC2D2BQ6DHV5 1058 aa5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 ABHD17AQ96GS6 310 aa5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 RSPH6AQ9H0K4 717 aa5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 RUBCNLQ9H714 662 aa5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 NDFIP2Q9NV92 336 aa5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 GDF2Q9UK05 429 aaPredicted RBP5.98□□□□□ -1.45
SMARCB1-208ENST00000634926 GNB5O14775 395 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 BNIP3LO60238 219 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 IL2RAP01589 272 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 EPXP11678 715 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 AMPD1P23109 780 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 SLCO4C1Q6ZQN7 724 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 GOLGA6L1Q8N7Z2 621 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 KLF15Q9UIH9 416 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 HRH3Q9Y5N1 445 aa5.97□□□□□ -1.45
SMARCB1-208ENST00000634926 USP17L8P0C7I0 530 aa5.96□□□□□ -1.46
SMARCB1-208ENST00000634926 SKIV2LQ15477 1246 aaKnown RBP5.96□□□□□ -1.46
SMARCB1-208ENST00000634926 RSPO4Q2I0M5 234 aaPredicted RBP5.96□□□□□ -1.46
SMARCB1-208ENST00000634926 SLC24A3Q9HC58 644 aa5.96□□□□□ -1.46
SMARCB1-208ENST00000634926 FBXO45P0C2W1 286 aa5.95□□□□□ -1.46
SMARCB1-208ENST00000634926 BMP4P12644 408 aa5.95□□□□□ -1.46
SMARCB1-208ENST00000634926 CENPCQ03188 943 aa5.95□□□□□ -1.46
SMARCB1-208ENST00000634926 TRIM11Q96F44 468 aa5.95□□□□□ -1.46
SMARCB1-208ENST00000634926 PCDHB9Q9Y5E1 797 aa5.95□□□□□ -1.46
SMARCB1-208ENST00000634926 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 NEURL1BA8MQ27 555 aa5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 MSX1P28360 303 aa5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 NKAPLQ5M9Q1 402 aa5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 RNF135Q8IUD6 432 aa5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 CNKSR1Q969H4 720 aa5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 FHDC1Q9C0D6 1143 aaPredicted RBP5.94□□□□□ -1.46
SMARCB1-208ENST00000634926 STAU1O95793 577 aaKnown RBP5.93□□□□□ -1.46
SMARCB1-208ENST00000634926 FGFR3P22607 806 aa5.93□□□□□ -1.46
SMARCB1-208ENST00000634926 C4orf17Q53FE4 359 aa5.93□□□□□ -1.46
SMARCB1-208ENST00000634926 SH3D19Q5HYK7 790 aa5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 CYP2U1Q7Z449 544 aa5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 ESYT1Q9BSJ8 1104 aa5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 DNAAF2Q9NVR5 837 aaKnown RBP5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 ATXN7L1Q9ULK2 861 aaPredicted RBP5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 PHF24Q9UPV7 400 aa5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 PCDHB11Q9Y5F2 797 aa5.92□□□□□ -1.46
SMARCB1-208ENST00000634926 A0A1B0GTH6 734 aa5.91□□□□□ -1.46
SMARCB1-208ENST00000634926 ZBBXA8MT70 800 aa5.91□□□□□ -1.46
SMARCB1-208ENST00000634926 GATA4P43694 442 aa5.91□□□□□ -1.46
SMARCB1-208ENST00000634926 CHSY3Q70JA7 882 aa5.91□□□□□ -1.46
SMARCB1-208ENST00000634926 FCHSD1Q86WN1 690 aa5.91□□□□□ -1.46
SMARCB1-208ENST00000634926 TPSG1Q9NRR2 321 aa5.91□□□□□ -1.46
SMARCB1-208ENST00000634926 GJD4Q96KN9 370 aaPredicted RBP5.9□□□□□ -1.46
SMARCB1-208ENST00000634926 CDCA7Q9BWT1 371 aaPredicted RBP5.9□□□□□ -1.46
SMARCB1-208ENST00000634926 FAM117AQ9C073 453 aa5.9□□□□□ -1.46
SMARCB1-208ENST00000634926 SCO2A0A1W2PP80 73 aa5.89□□□□□ -1.47
SMARCB1-208ENST00000634926 ARAFP10398 606 aa5.89□□□□□ -1.47
SMARCB1-208ENST00000634926 ARTNQ5T4W7 220 aa5.89□□□□□ -1.47
SMARCB1-208ENST00000634926 XAGE2Q96GT9 111 aa5.89□□□□□ -1.47
SMARCB1-208ENST00000634926 ZSCAN10Q96SZ4 725 aaPredicted RBP5.89□□□□□ -1.47
SMARCB1-208ENST00000634926 PLVAPQ9BX97 442 aa5.89□□□□□ -1.47
SMARCB1-208ENST00000634926 GPR37L1O60883 481 aa5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 GNRH1P01148 92 aa5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 RFC5P40937 340 aa5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 LBRQ14739 615 aaKnown RBP5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 ZCCHC2Q9C0B9 1178 aaKnown RBP5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 GPBP1L1Q9HC44 474 aaPredicted RBP5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 NOP53Q9NZM5 478 aaKnown RBP5.88□□□□□ -1.47
SMARCB1-208ENST00000634926 DYRK3O43781 588 aa5.87□□□□□ -1.47
SMARCB1-208ENST00000634926 CCDC85AQ96PX6 553 aaPredicted RBP5.87□□□□□ -1.47
SMARCB1-208ENST00000634926 CRISPLD1Q9H336 500 aa5.87□□□□□ -1.47
SMARCB1-208ENST00000634926 ZFP64Q9NPA5 681 aa5.87□□□□□ -1.47
SMARCB1-208ENST00000634926 CSB-PGBD3P0DP91 1061 aa5.86□□□□□ -1.47
SMARCB1-208ENST00000634926 ATP4AP20648 1035 aa5.86□□□□□ -1.47
SMARCB1-208ENST00000634926 TSGA10IPQ3SY00 556 aa5.86□□□□□ -1.47
SMARCB1-208ENST00000634926 PGBD3Q8N328 593 aa5.86□□□□□ -1.47
SMARCB1-208ENST00000634926 PNMA1Q8ND90 353 aa5.86□□□□□ -1.47
SMARCB1-208ENST00000634926 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 CD33P20138 364 aa5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 PCBP4P57723 403 aaKnown RBP5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 COL9A3Q14050 684 aaPredicted RBP5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 EFHC2Q5JST6 749 aa5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 PRSS36Q5K4E3 855 aa5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 ATP1B4Q9UN42 357 aaPredicted RBP5.85□□□□□ -1.47
SMARCB1-208ENST00000634926 GNASQ5JWF2 1037 aa5.84□□□□□ -1.47
SMARCB1-208ENST00000634926 RNF20Q5VTR2 975 aa5.84□□□□□ -1.47
SMARCB1-208ENST00000634926 DCDC2BA2VCK2 349 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 PIK3R2O00459 728 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 SPATA31C1P0DKV0 1188 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 MAPTP10636 758 aaKnown RBP5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 ADH6P28332 368 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 TNP2Q05952 138 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 PPARGC1BQ86YN6 1023 aaKnown RBP5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 CCDC125Q86Z20 511 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms