RNA–Protein interactions for RNA: ENST00000629716.2

LINC01515-220, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-220ENST00000629716 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
LINC01515-220ENST00000629716 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
LINC01515-220ENST00000629716 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
LINC01515-220ENST00000629716 CSB-PGBD3P0DP91 1061 aa12.62□□□□□ -0.39
LINC01515-220ENST00000629716 HSPA1LP34931 641 aa12.62□□□□□ -0.39
LINC01515-220ENST00000629716 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
LINC01515-220ENST00000629716 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
LINC01515-220ENST00000629716 MAPK8IP3Q9UPT6 1336 aa12.62□□□□□ -0.39
LINC01515-220ENST00000629716 HMOX1P09601 288 aa12.61□□□□□ -0.39
LINC01515-220ENST00000629716 EVA1CP58658 441 aa12.61□□□□□ -0.39
LINC01515-220ENST00000629716 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
LINC01515-220ENST00000629716 EYA1Q99502 592 aa12.61□□□□□ -0.39
LINC01515-220ENST00000629716 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
LINC01515-220ENST00000629716 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
LINC01515-220ENST00000629716 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
LINC01515-220ENST00000629716 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
LINC01515-220ENST00000629716 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
LINC01515-220ENST00000629716 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
LINC01515-220ENST00000629716 IGSF1Q8N6C5 1336 aa12.6□□□□□ -0.39
LINC01515-220ENST00000629716 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
LINC01515-220ENST00000629716 LTN1O94822 1766 aa12.59□□□□□ -0.39
LINC01515-220ENST00000629716 ABCC6O95255 1503 aa12.59□□□□□ -0.39
LINC01515-220ENST00000629716 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
LINC01515-220ENST00000629716 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
LINC01515-220ENST00000629716 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
LINC01515-220ENST00000629716 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
LINC01515-220ENST00000629716 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
LINC01515-220ENST00000629716 APAF1O14727 1248 aa12.58□□□□□ -0.4
LINC01515-220ENST00000629716 PTGER2P43116 358 aa12.58□□□□□ -0.4
LINC01515-220ENST00000629716 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
LINC01515-220ENST00000629716 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
LINC01515-220ENST00000629716 CRYBG1Q9Y4K1 1723 aa12.58□□□□□ -0.4
LINC01515-220ENST00000629716 CENPBP07199 599 aaPredicted RBP12.57□□□□□ -0.4
LINC01515-220ENST00000629716 NBPF6Q5VWK0 638 aa12.57□□□□□ -0.4
LINC01515-220ENST00000629716 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
LINC01515-220ENST00000629716 NBPF4Q96M43 638 aa12.57□□□□□ -0.4
LINC01515-220ENST00000629716 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
LINC01515-220ENST00000629716 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
LINC01515-220ENST00000629716 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
LINC01515-220ENST00000629716 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01515-220ENST00000629716 MEX3CQ5U5Q3 659 aaKnown RBP12.56□□□□□ -0.4
LINC01515-220ENST00000629716 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
LINC01515-220ENST00000629716 AEBP1Q8IUX7 1158 aa12.56□□□□□ -0.4
LINC01515-220ENST00000629716 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
LINC01515-220ENST00000629716 ZBED9Q6R2W3 1325 aa12.56□□□□□ -0.4
LINC01515-220ENST00000629716 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
LINC01515-220ENST00000629716 SENP3-EIF4A1A0A087X0R7 540 aa12.55□□□□□ -0.4
LINC01515-220ENST00000629716 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
LINC01515-220ENST00000629716 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
LINC01515-220ENST00000629716 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
LINC01515-220ENST00000629716 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
LINC01515-220ENST00000629716 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
LINC01515-220ENST00000629716 POTEEQ6S8J3 1075 aa12.54□□□□□ -0.4
LINC01515-220ENST00000629716 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
LINC01515-220ENST00000629716 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
LINC01515-220ENST00000629716 KDRP35968 1356 aa12.54□□□□□ -0.4
LINC01515-220ENST00000629716 COL18A1P39060 1754 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 PBX2P40425 430 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 RIPK4P57078 832 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 NFE2L2Q16236 605 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
LINC01515-220ENST00000629716 CAMTA1Q9Y6Y1 1673 aa12.53□□□□□ -0.4
LINC01515-220ENST00000629716 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
LINC01515-220ENST00000629716 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
LINC01515-220ENST00000629716 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
LINC01515-220ENST00000629716 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
LINC01515-220ENST00000629716 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
LINC01515-220ENST00000629716 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
LINC01515-220ENST00000629716 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.41
LINC01515-220ENST00000629716 FOXK1P85037 733 aa12.51□□□□□ -0.41
LINC01515-220ENST00000629716 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
LINC01515-220ENST00000629716 CCDC27Q2M243 656 aa12.51□□□□□ -0.41
LINC01515-220ENST00000629716 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
LINC01515-220ENST00000629716 LARP1Q6PKG0 1096 aaKnown RBP12.51□□□□□ -0.41
LINC01515-220ENST00000629716 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
LINC01515-220ENST00000629716 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
LINC01515-220ENST00000629716 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
LINC01515-220ENST00000629716 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
LINC01515-220ENST00000629716 CCDC9Q9Y3X0 531 aaKnown RBP12.5□□□□□ -0.41
LINC01515-220ENST00000629716 RGPD5Q99666 1765 aa12.5□□□□□ -0.41
LINC01515-220ENST00000629716 CRB1P82279 1406 aa12.49□□□□□ -0.41
LINC01515-220ENST00000629716 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
LINC01515-220ENST00000629716 CALD1Q05682 793 aaKnown RBP12.49□□□□□ -0.41
LINC01515-220ENST00000629716 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
LINC01515-220ENST00000629716 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
LINC01515-220ENST00000629716 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
LINC01515-220ENST00000629716 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
LINC01515-220ENST00000629716 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
LINC01515-220ENST00000629716 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
LINC01515-220ENST00000629716 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
LINC01515-220ENST00000629716 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
LINC01515-220ENST00000629716 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
LINC01515-220ENST00000629716 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
LINC01515-220ENST00000629716 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
LINC01515-220ENST00000629716 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
LINC01515-220ENST00000629716 IL2RBP14784 551 aa12.47□□□□□ -0.41
LINC01515-220ENST00000629716 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
LINC01515-220ENST00000629716 USP21Q9UK80 565 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms