RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 PHF14O94880 888 aa34.79■■■■□ 3.16
TCF4-259ENST00000627568 MTHFSP49914 203 aa34.79■■■■□ 3.16
TCF4-259ENST00000627568 LINC00116Q8NCU8 138 aa34.78■■■■□ 3.16
TCF4-259ENST00000627568 KDM6AO15550 1401 aaPredicted RBP34.78■■■■□ 3.16
TCF4-259ENST00000627568 SSFA2P28290 1259 aa34.76■■■■□ 3.16
TCF4-259ENST00000627568 CABP4P57796 275 aa34.76■■■■□ 3.16
TCF4-259ENST00000627568 CHD4Q14839 1912 aa34.76■■■■□ 3.15
TCF4-259ENST00000627568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.75■■■■□ 3.15
TCF4-259ENST00000627568 GPR162Q16538 588 aa34.75■■■■□ 3.15
TCF4-259ENST00000627568 ITPK1Q13572 414 aa34.74■■■■□ 3.15
TCF4-259ENST00000627568 UTRNP46939 3433 aa34.74■■■■□ 3.15
TCF4-259ENST00000627568 RBM42Q9BTD8 480 aaKnown RBP34.73■■■■□ 3.15
TCF4-259ENST00000627568 NPC1L1Q9UHC9 1359 aa34.73■■■■□ 3.15
TCF4-259ENST00000627568 GNPATO15228 680 aa34.72■■■■□ 3.15
TCF4-259ENST00000627568 AMIGO3Q86WK7 504 aa34.72■■■■□ 3.15
TCF4-259ENST00000627568 ZNF831Q5JPB2 1677 aa34.72■■■■□ 3.15
TCF4-259ENST00000627568 PELP1Q8IZL8 1130 aaKnown RBP34.7■■■■□ 3.15
TCF4-259ENST00000627568 NLGN2Q8NFZ4 835 aa34.7■■■■□ 3.15
TCF4-259ENST00000627568 DIAPH1O60610 1272 aaKnown RBP34.68■■■■□ 3.14
TCF4-259ENST00000627568 CNGB1Q14028 1251 aaPredicted RBP34.68■■■■□ 3.14
TCF4-259ENST00000627568 SMIM5Q71RC9 77 aa34.68■■■■□ 3.14
TCF4-259ENST00000627568 SCN11AQ9UI33 1791 aa34.67■■■■□ 3.14
TCF4-259ENST00000627568 HMOX1P09601 288 aa34.66■■■■□ 3.14
TCF4-259ENST00000627568 AKAP4Q5JQC9 854 aa34.66■■■■□ 3.14
TCF4-259ENST00000627568 COL5A3P25940 1745 aaPredicted RBP34.64■■■■□ 3.14
TCF4-259ENST00000627568 NFATC2IPQ8NCF5 419 aa34.63■■■■□ 3.13
TCF4-259ENST00000627568 RTCBQ9Y3I0 505 aaKnown RBP34.63■■■■□ 3.13
TCF4-259ENST00000627568 CD2APQ9Y5K6 639 aa34.63■■■■□ 3.13
TCF4-259ENST00000627568 SLC4A9Q96Q91 983 aa34.62■■■■□ 3.13
TCF4-259ENST00000627568 PTCD1O75127 700 aaKnown RBP34.6■■■■□ 3.13
TCF4-259ENST00000627568 CNTNAP4Q9C0A0 1308 aa34.59■■■■□ 3.13
TCF4-259ENST00000627568 RC3H1Q5TC82 1133 aaKnown RBP34.59■■■■□ 3.13
TCF4-259ENST00000627568 VIRMAQ69YN4 1812 aaKnown RBP34.58■■■■□ 3.13
TCF4-259ENST00000627568 TRAPPC3LQ5T215 181 aa34.58■■■■□ 3.13
TCF4-259ENST00000627568 COL3A1P02461 1466 aaPredicted RBP34.57■■■■□ 3.12
TCF4-259ENST00000627568 ADRA2BP18089 450 aa34.56■■■■□ 3.12
TCF4-259ENST00000627568 SLC52A2Q9HAB3 445 aa34.55■■■■□ 3.12
TCF4-259ENST00000627568 GOLGB1Q14789 3259 aaKnown RBP34.55■■■■□ 3.12
TCF4-259ENST00000627568 U2SURPO15042 1029 aaKnown RBP34.54■■■■□ 3.12
TCF4-259ENST00000627568 GRIN3BO60391 1043 aa34.54■■■■□ 3.12
TCF4-259ENST00000627568 ZNF784Q8NCA9 323 aaPredicted RBP34.54■■■■□ 3.12
TCF4-259ENST00000627568 MRC1P22897 1456 aa34.53■■■■□ 3.12
TCF4-259ENST00000627568 MYH14Q7Z406 1995 aaKnown RBP34.53■■■■□ 3.12
TCF4-259ENST00000627568 CICQ96RK0 1608 aaPredicted RBP34.52■■■■□ 3.12
TCF4-259ENST00000627568 RNMTO43148 476 aaKnown RBP34.52■■■■□ 3.12
TCF4-259ENST00000627568 RPS6KA4O75676 772 aa34.52■■■■□ 3.12
TCF4-259ENST00000627568 MTHFSDQ2M296 383 aaKnown RBP34.52■■■■□ 3.12
TCF4-259ENST00000627568 YBX3P16989 372 aaKnown RBP eCLIP34.51■■■■□ 3.12
TCF4-259ENST00000627568 TJP1Q07157 1748 aa34.51■■■■□ 3.12
TCF4-259ENST00000627568 LGR6Q9HBX8 967 aa34.51■■■■□ 3.12
TCF4-259ENST00000627568 RFC4P35249 363 aa34.5■■■■□ 3.11
TCF4-259ENST00000627568 ARHGEF1Q92888 912 aaKnown RBP34.5■■■■□ 3.11
TCF4-259ENST00000627568 MMP10P09238 476 aa34.49■■■■□ 3.11
TCF4-259ENST00000627568 CRKLP46109 303 aaKnown RBP34.49■■■■□ 3.11
TCF4-259ENST00000627568 CFAP53Q96M91 514 aa34.49■■■■□ 3.11
TCF4-259ENST00000627568 C4AP0C0L4 1744 aa34.48■■■■□ 3.11
TCF4-259ENST00000627568 NLGN1Q8N2Q7 840 aa34.48■■■■□ 3.11
TCF4-259ENST00000627568 ADAMTS7Q9UKP4 1686 aa34.47■■■■□ 3.11
TCF4-259ENST00000627568 GAS2L2Q8NHY3 880 aa34.43■■■■□ 3.1
TCF4-259ENST00000627568 GYS1P13807 737 aa34.41■■■■□ 3.1
TCF4-259ENST00000627568 SLC39A6Q13433 755 aa34.41■■■■□ 3.1
TCF4-259ENST00000627568 DNAJC10Q8IXB1 793 aa34.39■■■■□ 3.1
TCF4-259ENST00000627568 NUDCQ9Y266 331 aa34.39■■■■□ 3.1
TCF4-259ENST00000627568 KIF13BQ9NQT8 1826 aa34.39■■■■□ 3.1
TCF4-259ENST00000627568 KCPQ6ZWJ8 1503 aa34.38■■■■□ 3.09
TCF4-259ENST00000627568 GNAT3A8MTJ3 354 aa34.37■■■■□ 3.09
TCF4-259ENST00000627568 CCDC87Q9NVE4 849 aa34.37■■■■□ 3.09
TCF4-259ENST00000627568 PARP3Q9Y6F1 533 aa34.37■■■■□ 3.09
TCF4-259ENST00000627568 PPP2R1AP30153 589 aa34.36■■■■□ 3.09
TCF4-259ENST00000627568 TEFQ10587 303 aa34.36■■■■□ 3.09
TCF4-259ENST00000627568 TTC5Q8N0Z6 440 aa34.36■■■■□ 3.09
TCF4-259ENST00000627568 INTS5Q6P9B9 1019 aaKnown RBP34.35■■■■□ 3.09
TCF4-259ENST00000627568 WWC3Q9ULE0 1092 aa34.35■■■■□ 3.09
TCF4-259ENST00000627568 USP42Q9H9J4 1324 aaKnown RBP34.34■■■■□ 3.09
TCF4-259ENST00000627568 UBR2Q8IWV8 1755 aa34.34■■■■□ 3.09
TCF4-259ENST00000627568 PRKAR2BP31323 418 aa34.34■■■■□ 3.09
TCF4-259ENST00000627568 C10orf71Q711Q0 1435 aa34.34■■■■□ 3.09
TCF4-259ENST00000627568 VSIG10Q8N0Z9 540 aa34.33■■■■□ 3.09
TCF4-259ENST00000627568 SRP68Q9UHB9 627 aaKnown RBP34.33■■■■□ 3.09
TCF4-259ENST00000627568 CYP19A1P11511 503 aaPredicted RBP34.32■■■■□ 3.08
TCF4-259ENST00000627568 PXDNLA1KZ92 1463 aa34.32■■■■□ 3.08
TCF4-259ENST00000627568 TGFB2P61812 414 aa34.31■■■■□ 3.08
TCF4-259ENST00000627568 RSPH6AQ9H0K4 717 aa34.31■■■■□ 3.08
TCF4-259ENST00000627568 U2AF1L5P0DN76 240 aaPredicted RBP34.3■■■■□ 3.08
TCF4-259ENST00000627568 U2AF1Q01081 240 aaKnown RBP eCLIP34.3■■■■□ 3.08
TCF4-259ENST00000627568 SOS1Q07889 1333 aaPredicted RBP34.3■■■■□ 3.08
TCF4-259ENST00000627568 N4BP2Q86UW6 1770 aaPredicted RBP34.29■■■■□ 3.08
TCF4-259ENST00000627568 ZPR1O75312 459 aa34.29■■■■□ 3.08
TCF4-259ENST00000627568 IL17REQ8NFR9 667 aa34.29■■■■□ 3.08
TCF4-259ENST00000627568 SIPA1L3O60292 1781 aaPredicted RBP34.28■■■■□ 3.08
TCF4-259ENST00000627568 KIAA1551Q9HCM1 1747 aa34.28■■■■□ 3.08
TCF4-259ENST00000627568 FKBP8Q14318 412 aa34.27■■■■□ 3.08
TCF4-259ENST00000627568 PHACTR3Q96KR7 559 aa34.26■■■■□ 3.08
TCF4-259ENST00000627568 ZBTB1Q9Y2K1 713 aa34.26■■■■□ 3.08
TCF4-259ENST00000627568 COL15A1P39059 1388 aa34.25■■■■□ 3.07
TCF4-259ENST00000627568 STARD3NLO95772 234 aa34.24■■■■□ 3.07
TCF4-259ENST00000627568 ZNF790Q6PG37 636 aa34.24■■■■□ 3.07
TCF4-259ENST00000627568 CEMIPQ8WUJ3 1361 aa34.23■■■■□ 3.07
TCF4-259ENST00000627568 USPL1Q5W0Q7 1092 aa34.23■■■■□ 3.07
TCF4-259ENST00000627568 A0A0G2JLW4 131 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms