RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 MRPL50Q8N5N7 158 aaKnown RBP17.32■□□□□ 0.36
PDXDC1-218ENST00000627450 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
PDXDC1-218ENST00000627450 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
PDXDC1-218ENST00000627450 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
PDXDC1-218ENST00000627450 ERICH6BQ5W0A0 696 aa17.31■□□□□ 0.36
PDXDC1-218ENST00000627450 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
PDXDC1-218ENST00000627450 SPATA31A6Q5VVP1 1343 aa17.3■□□□□ 0.36
PDXDC1-218ENST00000627450 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
PDXDC1-218ENST00000627450 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
PDXDC1-218ENST00000627450 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
PDXDC1-218ENST00000627450 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 BCL9LQ86UU0 1499 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 DISP2A7MBM2 1401 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
PDXDC1-218ENST00000627450 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 CABP4P57796 275 aa17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 KDM3BQ7LBC6 1761 aa17.28■□□□□ 0.36
PDXDC1-218ENST00000627450 EP400Q96L91 3159 aa17.27■□□□□ 0.36
PDXDC1-218ENST00000627450 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
PDXDC1-218ENST00000627450 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
PDXDC1-218ENST00000627450 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.36
PDXDC1-218ENST00000627450 USP21Q9UK80 565 aa17.27■□□□□ 0.35
PDXDC1-218ENST00000627450 KIF16BQ96L93 1317 aa17.27■□□□□ 0.35
PDXDC1-218ENST00000627450 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.35
PDXDC1-218ENST00000627450 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.35
PDXDC1-218ENST00000627450 EXOC5O00471 708 aa17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 FAM98CQ17RN3 349 aaKnown RBP17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 DZIP1LQ8IYY4 767 aaKnown RBP17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 FNBP4Q8N3X1 1017 aaPredicted RBP17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 G2E3Q7L622 706 aa17.26■□□□□ 0.35
PDXDC1-218ENST00000627450 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
PDXDC1-218ENST00000627450 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
PDXDC1-218ENST00000627450 HDGFL1Q5TGJ6 251 aa17.24■□□□□ 0.35
PDXDC1-218ENST00000627450 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
PDXDC1-218ENST00000627450 DDB1Q16531 1140 aa17.24■□□□□ 0.35
PDXDC1-218ENST00000627450 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
PDXDC1-218ENST00000627450 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
PDXDC1-218ENST00000627450 ANXA1P04083 346 aa17.23■□□□□ 0.35
PDXDC1-218ENST00000627450 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
PDXDC1-218ENST00000627450 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
PDXDC1-218ENST00000627450 VPS72Q15906 364 aa17.22■□□□□ 0.35
PDXDC1-218ENST00000627450 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
PDXDC1-218ENST00000627450 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
PDXDC1-218ENST00000627450 MRC1P22897 1456 aa17.22■□□□□ 0.35
PDXDC1-218ENST00000627450 AFF2P51816 1311 aa17.22■□□□□ 0.35
PDXDC1-218ENST00000627450 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
PDXDC1-218ENST00000627450 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 A0A0G2JS52 829 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 ERVV-2B6SEH9 535 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 MYT1Q01538 1121 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
PDXDC1-218ENST00000627450 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
PDXDC1-218ENST00000627450 TNS2Q63HR2 1409 aa17.2■□□□□ 0.34
PDXDC1-218ENST00000627450 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
PDXDC1-218ENST00000627450 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
PDXDC1-218ENST00000627450 BARGINQ6ZT62 677 aa17.2■□□□□ 0.34
PDXDC1-218ENST00000627450 F6X3S4 739 aa17.19■□□□□ 0.34
PDXDC1-218ENST00000627450 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
PDXDC1-218ENST00000627450 PIGBQ92521 554 aa17.19■□□□□ 0.34
PDXDC1-218ENST00000627450 ARHGAP45Q92619 1136 aa17.19■□□□□ 0.34
PDXDC1-218ENST00000627450 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
PDXDC1-218ENST00000627450 PROSER3Q2NL68 480 aa17.18■□□□□ 0.34
PDXDC1-218ENST00000627450 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
PDXDC1-218ENST00000627450 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
PDXDC1-218ENST00000627450 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
PDXDC1-218ENST00000627450 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
PDXDC1-218ENST00000627450 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
PDXDC1-218ENST00000627450 FLIIQ13045 1269 aa17.17■□□□□ 0.34
PDXDC1-218ENST00000627450 RGS12O14924 1447 aa17.17■□□□□ 0.34
PDXDC1-218ENST00000627450 MS4A1P11836 297 aa17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 FKBP5Q13451 457 aaPredicted RBP17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 FAM182BQ5T319 152 aa17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 HOXB7P09629 217 aa17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 ABCC4O15439 1325 aa17.16■□□□□ 0.34
PDXDC1-218ENST00000627450 SLC4A10Q6U841 1118 aa17.15■□□□□ 0.34
PDXDC1-218ENST00000627450 API5Q9BZZ5 524 aaKnown RBP17.15■□□□□ 0.34
PDXDC1-218ENST00000627450 C5P01031 1676 aa17.15■□□□□ 0.34
PDXDC1-218ENST00000627450 ITGB4P16144 1822 aa17.15■□□□□ 0.34
PDXDC1-218ENST00000627450 GJD4Q96KN9 370 aaPredicted RBP17.15■□□□□ 0.34
PDXDC1-218ENST00000627450 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
PDXDC1-218ENST00000627450 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.34
PDXDC1-218ENST00000627450 SNRPA1P09661 255 aaKnown RBP17.14■□□□□ 0.33
PDXDC1-218ENST00000627450 PTPRCP08575 1304 aa17.14■□□□□ 0.33
PDXDC1-218ENST00000627450 DDX19BQ9UMR2 479 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms