RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
VBP1-204ENST00000625964 HMX1Q9NP08 348 aaPredicted RBP8.09□□□□□ -1.11
VBP1-204ENST00000625964 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
VBP1-204ENST00000625964 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
VBP1-204ENST00000625964 A0A1B0GTH6 734 aa8.08□□□□□ -1.12
VBP1-204ENST00000625964 ZBBXA8MT70 800 aa8.08□□□□□ -1.12
VBP1-204ENST00000625964 AMPD1P23109 780 aa8.08□□□□□ -1.12
VBP1-204ENST00000625964 SLCO4C1Q6ZQN7 724 aa8.08□□□□□ -1.12
VBP1-204ENST00000625964 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
VBP1-204ENST00000625964 ATXN7L1Q9ULK2 861 aaPredicted RBP8.08□□□□□ -1.12
VBP1-204ENST00000625964 PCDHB9Q9Y5E1 797 aa8.08□□□□□ -1.12
VBP1-204ENST00000625964 THBS1P07996 1170 aa8.07□□□□□ -1.12
VBP1-204ENST00000625964 HOXB4P17483 251 aaPredicted RBP8.07□□□□□ -1.12
VBP1-204ENST00000625964 CD163Q86VB7 1156 aa8.07□□□□□ -1.12
VBP1-204ENST00000625964 ESF1Q9H501 851 aaKnown RBP8.07□□□□□ -1.12
VBP1-204ENST00000625964 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
VBP1-204ENST00000625964 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
VBP1-204ENST00000625964 TRAK2O60296 914 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 CSB-PGBD3P0DP91 1061 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 BMP4P12644 408 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 UBAP2LQ14157 1087 aaKnown RBP8.05□□□□□ -1.12
VBP1-204ENST00000625964 PGBD3Q8N328 593 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 BTBD6Q96KE9 485 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 KRTAP4-12Q9BQ66 201 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
VBP1-204ENST00000625964 GNRH1P01148 92 aa8.04□□□□□ -1.12
VBP1-204ENST00000625964 ESYT1Q9BSJ8 1104 aa8.04□□□□□ -1.12
VBP1-204ENST00000625964 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
VBP1-204ENST00000625964 EFHC2Q5JST6 749 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 DDRGK1Q96HY6 314 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 OSBPL3Q9H4L5 887 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 GPAMQ9HCL2 828 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 EPXP11678 715 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 CHRNA4P43681 627 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 CENPCQ03188 943 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 ZSCAN10Q96SZ4 725 aaPredicted RBP8.03□□□□□ -1.12
VBP1-204ENST00000625964 SEMA6BQ9H3T3 888 aa8.03□□□□□ -1.12
VBP1-204ENST00000625964 ARAFP10398 606 aa8.02□□□□□ -1.13
VBP1-204ENST00000625964 DGKGP49619 791 aa8.02□□□□□ -1.13
VBP1-204ENST00000625964 GNASQ5JWF2 1037 aa8.02□□□□□ -1.13
VBP1-204ENST00000625964 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
VBP1-204ENST00000625964 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
VBP1-204ENST00000625964 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
VBP1-204ENST00000625964 C2CD2LO14523 706 aa8.01□□□□□ -1.13
VBP1-204ENST00000625964 FGFR3P22607 806 aa8.01□□□□□ -1.13
VBP1-204ENST00000625964 ITGB7P26010 798 aa8.01□□□□□ -1.13
VBP1-204ENST00000625964 SCTRP47872 440 aa8.01□□□□□ -1.13
VBP1-204ENST00000625964 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
VBP1-204ENST00000625964 FBXO45P0C2W1 286 aa8□□□□□ -1.13
VBP1-204ENST00000625964 NDFIP2Q9NV92 336 aa8□□□□□ -1.13
VBP1-204ENST00000625964 ZNF330Q9Y3S2 320 aaPredicted RBP8□□□□□ -1.13
VBP1-204ENST00000625964 RFC5P40937 340 aa7.99□□□□□ -1.13
VBP1-204ENST00000625964 PHKA2P46019 1235 aa7.99□□□□□ -1.13
VBP1-204ENST00000625964 DOC2BQ14184 412 aa7.99□□□□□ -1.13
VBP1-204ENST00000625964 RNF135Q8IUD6 432 aa7.99□□□□□ -1.13
VBP1-204ENST00000625964 XAGE2Q96GT9 111 aa7.99□□□□□ -1.13
VBP1-204ENST00000625964 IL2RAP01589 272 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 MSX1P28360 303 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 FIGNL1Q6PIW4 674 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 CRISPLD1Q9H336 500 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 RUBCNLQ9H714 662 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 HRH3Q9Y5N1 445 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 GATA4P43694 442 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 CTBSQ01459 385 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
VBP1-204ENST00000625964 ABHD17AQ96GS6 310 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 RAB6BQ9NRW1 208 aa7.98□□□□□ -1.13
VBP1-204ENST00000625964 BNIP3LO60238 219 aa7.97□□□□□ -1.13
VBP1-204ENST00000625964 C4orf17Q53FE4 359 aa7.97□□□□□ -1.13
VBP1-204ENST00000625964 AVENQ9NQS1 362 aaPredicted RBP7.97□□□□□ -1.13
VBP1-204ENST00000625964 MYCP01106 439 aaPredicted RBP7.96□□□□□ -1.14
VBP1-204ENST00000625964 NR1H3Q13133 447 aa7.96□□□□□ -1.14
VBP1-204ENST00000625964 CHSY3Q70JA7 882 aa7.96□□□□□ -1.14
VBP1-204ENST00000625964 FHDC1Q9C0D6 1143 aaPredicted RBP7.96□□□□□ -1.14
VBP1-204ENST00000625964 ESCO1Q5FWF5 840 aa7.95□□□□□ -1.14
VBP1-204ENST00000625964 NEURL1BA8MQ27 555 aa7.94□□□□□ -1.14
VBP1-204ENST00000625964 SPATA31C1P0DKV0 1188 aa7.94□□□□□ -1.14
VBP1-204ENST00000625964 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
VBP1-204ENST00000625964 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
VBP1-204ENST00000625964 FAM117AQ9C073 453 aa7.94□□□□□ -1.14
VBP1-204ENST00000625964 PCDHGC4Q9Y5F7 938 aa7.94□□□□□ -1.14
VBP1-204ENST00000625964 ADH6P28332 368 aa7.93□□□□□ -1.14
VBP1-204ENST00000625964 FAM182BQ5T319 152 aa7.93□□□□□ -1.14
VBP1-204ENST00000625964 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
VBP1-204ENST00000625964 KDM4CQ9H3R0 1056 aa7.93□□□□□ -1.14
VBP1-204ENST00000625964 SCO2A0A1W2PP80 73 aa7.93□□□□□ -1.14
VBP1-204ENST00000625964 NLRP8Q86W28 1048 aa7.93□□□□□ -1.14
VBP1-204ENST00000625964 PPARGC1BQ86YN6 1023 aaKnown RBP7.92□□□□□ -1.14
VBP1-204ENST00000625964 GJD4Q96KN9 370 aaPredicted RBP7.92□□□□□ -1.14
VBP1-204ENST00000625964 SPDYE3A6NKU9 549 aa7.91□□□□□ -1.14
VBP1-204ENST00000625964 RSPO4Q2I0M5 234 aaPredicted RBP7.91□□□□□ -1.14
VBP1-204ENST00000625964 PLVAPQ9BX97 442 aa7.9□□□□□ -1.14
VBP1-204ENST00000625964 ZCCHC2Q9C0B9 1178 aaKnown RBP7.9□□□□□ -1.14
VBP1-204ENST00000625964 ZFP64Q9NPA5 681 aa7.9□□□□□ -1.14
VBP1-204ENST00000625964 DNAAF2Q9NVR5 837 aaKnown RBP7.9□□□□□ -1.14
VBP1-204ENST00000625964 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
VBP1-204ENST00000625964 ARTNQ5T4W7 220 aa7.89□□□□□ -1.15
VBP1-204ENST00000625964 TBC1D9Q6ZT07 1266 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms