RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 CHRNA4P43681 627 aa6.79□□□□□ -1.32
CHD2-203ENST00000625243 DOC2BQ14184 412 aa6.79□□□□□ -1.32
CHD2-203ENST00000625243 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
CHD2-203ENST00000625243 BTBD6Q96KE9 485 aa6.79□□□□□ -1.32
CHD2-203ENST00000625243 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD2-203ENST00000625243 ARHGEF10LQ9HCE6 1279 aa6.79□□□□□ -1.32
CHD2-203ENST00000625243 GGA1Q9UJY5 639 aa6.79□□□□□ -1.32
CHD2-203ENST00000625243 C2CD2LO14523 706 aa6.78□□□□□ -1.32
CHD2-203ENST00000625243 USP17L8P0C7I0 530 aa6.78□□□□□ -1.32
CHD2-203ENST00000625243 PHKA2P46019 1235 aa6.78□□□□□ -1.32
CHD2-203ENST00000625243 SLCO4C1Q6ZQN7 724 aa6.78□□□□□ -1.32
CHD2-203ENST00000625243 ESF1Q9H501 851 aaKnown RBP6.78□□□□□ -1.32
CHD2-203ENST00000625243 NOP53Q9NZM5 478 aaKnown RBP6.78□□□□□ -1.32
CHD2-203ENST00000625243 SCTRP47872 440 aa6.77□□□□□ -1.33
CHD2-203ENST00000625243 UBAP2LQ14157 1087 aaKnown RBP6.77□□□□□ -1.33
CHD2-203ENST00000625243 SH3D19Q5HYK7 790 aa6.77□□□□□ -1.33
CHD2-203ENST00000625243 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
CHD2-203ENST00000625243 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
CHD2-203ENST00000625243 A0A1B0GTH6 734 aa6.76□□□□□ -1.33
CHD2-203ENST00000625243 ZBBXA8MT70 800 aa6.76□□□□□ -1.33
CHD2-203ENST00000625243 CSB-PGBD3P0DP91 1061 aa6.76□□□□□ -1.33
CHD2-203ENST00000625243 LBRQ14739 615 aaKnown RBP6.76□□□□□ -1.33
CHD2-203ENST00000625243 PGBD3Q8N328 593 aa6.76□□□□□ -1.33
CHD2-203ENST00000625243 ABHD17AQ96GS6 310 aa6.76□□□□□ -1.33
CHD2-203ENST00000625243 ATXN7L1Q9ULK2 861 aaPredicted RBP6.76□□□□□ -1.33
CHD2-203ENST00000625243 EPXP11678 715 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 CTBSQ01459 385 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 CENPCQ03188 943 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 CNKSR1Q969H4 720 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 OSBPL3Q9H4L5 887 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 RAB6BQ9NRW1 208 aa6.75□□□□□ -1.33
CHD2-203ENST00000625243 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 TRAK2O60296 914 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 FGFR3P22607 806 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 DGKGP49619 791 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 EFHC2Q5JST6 749 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 ESYT1Q9BSJ8 1104 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 PCDHB11Q9Y5F2 797 aa6.74□□□□□ -1.33
CHD2-203ENST00000625243 GNRH1P01148 92 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 IL2RAP01589 272 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 MSX1P28360 303 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 GNASQ5JWF2 1037 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 RNF135Q8IUD6 432 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 ZSCAN10Q96SZ4 725 aaPredicted RBP6.73□□□□□ -1.33
CHD2-203ENST00000625243 TRIM34Q9BYJ4 488 aa6.73□□□□□ -1.33
CHD2-203ENST00000625243 NEURL1BA8MQ27 555 aa6.72□□□□□ -1.33
CHD2-203ENST00000625243 BNIP3LO60238 219 aa6.72□□□□□ -1.33
CHD2-203ENST00000625243 FBXO45P0C2W1 286 aa6.72□□□□□ -1.33
CHD2-203ENST00000625243 ARAFP10398 606 aa6.72□□□□□ -1.33
CHD2-203ENST00000625243 GTF2E1P29083 439 aaPredicted RBP6.72□□□□□ -1.33
CHD2-203ENST00000625243 GATA4P43694 442 aa6.72□□□□□ -1.33
CHD2-203ENST00000625243 C4orf17Q53FE4 359 aa6.71□□□□□ -1.34
CHD2-203ENST00000625243 TMEM214Q6NUQ4 689 aaKnown RBP6.71□□□□□ -1.34
CHD2-203ENST00000625243 NDFIP2Q9NV92 336 aa6.71□□□□□ -1.34
CHD2-203ENST00000625243 FOXD4L6Q3SYB3 417 aaPredicted RBP6.7□□□□□ -1.34
CHD2-203ENST00000625243 FOXD4L3Q6VB84 417 aaPredicted RBP6.7□□□□□ -1.34
CHD2-203ENST00000625243 CHSY3Q70JA7 882 aa6.7□□□□□ -1.34
CHD2-203ENST00000625243 KRTAP4-12Q9BQ66 201 aa6.7□□□□□ -1.34
CHD2-203ENST00000625243 RFC5P40937 340 aa6.69□□□□□ -1.34
CHD2-203ENST00000625243 MCCD1P59942 119 aaPredicted RBP6.69□□□□□ -1.34
CHD2-203ENST00000625243 XAGE2Q96GT9 111 aa6.69□□□□□ -1.34
CHD2-203ENST00000625243 HRH3Q9Y5N1 445 aa6.69□□□□□ -1.34
CHD2-203ENST00000625243 RSPO4Q2I0M5 234 aaPredicted RBP6.68□□□□□ -1.34
CHD2-203ENST00000625243 PLVAPQ9BX97 442 aa6.68□□□□□ -1.34
CHD2-203ENST00000625243 FHDC1Q9C0D6 1143 aaPredicted RBP6.68□□□□□ -1.34
CHD2-203ENST00000625243 FIGNL1Q6PIW4 674 aa6.67□□□□□ -1.34
CHD2-203ENST00000625243 DDRGK1Q96HY6 314 aa6.67□□□□□ -1.34
CHD2-203ENST00000625243 FAM117AQ9C073 453 aa6.67□□□□□ -1.34
CHD2-203ENST00000625243 ZFP64Q9NPA5 681 aa6.67□□□□□ -1.34
CHD2-203ENST00000625243 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
CHD2-203ENST00000625243 SPATA31C1P0DKV0 1188 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 ADH6P28332 368 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 NKAPLQ5M9Q1 402 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 ARTNQ5T4W7 220 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 TRIM11Q96F44 468 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
CHD2-203ENST00000625243 CRISPLD1Q9H336 500 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 PCDHGC4Q9Y5F7 938 aa6.66□□□□□ -1.34
CHD2-203ENST00000625243 NR1H3Q13133 447 aa6.65□□□□□ -1.34
CHD2-203ENST00000625243 NBPF11Q86T75 865 aa6.65□□□□□ -1.34
CHD2-203ENST00000625243 ZNF592Q92610 1267 aa6.65□□□□□ -1.34
CHD2-203ENST00000625243 ESCO1Q5FWF5 840 aa6.64□□□□□ -1.35
CHD2-203ENST00000625243 TBC1D9Q6ZT07 1266 aa6.64□□□□□ -1.35
CHD2-203ENST00000625243 FCHSD1Q86WN1 690 aa6.64□□□□□ -1.35
CHD2-203ENST00000625243 RHBDD1Q8TEB9 315 aa6.64□□□□□ -1.35
CHD2-203ENST00000625243 KDM4CQ9H3R0 1056 aa6.64□□□□□ -1.35
CHD2-203ENST00000625243 TPSG1Q9NRR2 321 aa6.64□□□□□ -1.35
CHD2-203ENST00000625243 DNAAF2Q9NVR5 837 aaKnown RBP6.64□□□□□ -1.35
CHD2-203ENST00000625243 ATXN7O15265 892 aaPredicted RBP6.63□□□□□ -1.35
CHD2-203ENST00000625243 TMEM259Q4ZIN3 620 aa6.63□□□□□ -1.35
CHD2-203ENST00000625243 PPARGC1BQ86YN6 1023 aaKnown RBP6.63□□□□□ -1.35
CHD2-203ENST00000625243 GJD4Q96KN9 370 aaPredicted RBP6.63□□□□□ -1.35
CHD2-203ENST00000625243 CDCA7Q9BWT1 371 aaPredicted RBP6.63□□□□□ -1.35
CHD2-203ENST00000625243 GPBP1L1Q9HC44 474 aaPredicted RBP6.63□□□□□ -1.35
CHD2-203ENST00000625243 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
CHD2-203ENST00000625243 DYRK3O43781 588 aa6.62□□□□□ -1.35
CHD2-203ENST00000625243 CD33P20138 364 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms