RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CALR3Q96L12 384 aaKnown RBP6.31□□□□□ -1.4
CDKL5-208ENST00000624953 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-208ENST00000624953 ARHGEF10LQ9HCE6 1279 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 IQSEC3Q9UPP2 1182 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-208ENST00000624953 KIAA1024Q9UPX6 916 aa6.31□□□□□ -1.4
CDKL5-208ENST00000624953 INHAP05111 366 aa6.3□□□□□ -1.4
CDKL5-208ENST00000624953 VSIG8P0DPA2 414 aa6.3□□□□□ -1.4
CDKL5-208ENST00000624953 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
CDKL5-208ENST00000624953 NOD1Q9Y239 953 aa6.3□□□□□ -1.4
CDKL5-208ENST00000624953 FAM181BA6NEQ2 426 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 M0R2N6 131 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 STAU1O95793 577 aaKnown RBP6.29□□□□□ -1.4
CDKL5-208ENST00000624953 GTF2IP78347 998 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 FOXK2Q01167 660 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.29□□□□□ -1.4
CDKL5-208ENST00000624953 ERICH6Q7L0X2 663 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 DEPDC4Q8N2C3 294 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 LARGE2Q8N3Y3 721 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 CNKSR1Q969H4 720 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 ARXQ96QS3 562 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 TIMELESSQ9UNS1 1208 aa6.29□□□□□ -1.4
CDKL5-208ENST00000624953 GDF10P55107 478 aa6.28□□□□□ -1.4
CDKL5-208ENST00000624953 PTK7Q13308 1070 aa6.28□□□□□ -1.4
CDKL5-208ENST00000624953 TRIM50Q86XT4 487 aa6.28□□□□□ -1.4
CDKL5-208ENST00000624953 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
CDKL5-208ENST00000624953 CUX2O14529 1486 aa6.28□□□□□ -1.4
CDKL5-208ENST00000624953 FAM196BA6NMK8 535 aa6.27□□□□□ -1.41
CDKL5-208ENST00000624953 CENPCQ03188 943 aa6.27□□□□□ -1.41
CDKL5-208ENST00000624953 ESCO1Q5FWF5 840 aa6.27□□□□□ -1.41
CDKL5-208ENST00000624953 C14orf37Q86TY3 774 aa6.27□□□□□ -1.41
CDKL5-208ENST00000624953 PPARGC1BQ86YN6 1023 aaKnown RBP6.27□□□□□ -1.41
CDKL5-208ENST00000624953 RAB6BQ9NRW1 208 aa6.27□□□□□ -1.41
CDKL5-208ENST00000624953 PPFIA3O75145 1194 aa6.26□□□□□ -1.41
CDKL5-208ENST00000624953 PTSQ03393 145 aa6.26□□□□□ -1.41
CDKL5-208ENST00000624953 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-208ENST00000624953 LYSMD3Q7Z3D4 306 aa6.26□□□□□ -1.41
CDKL5-208ENST00000624953 NANOS1Q8WY41 292 aaKnown RBP6.26□□□□□ -1.41
CDKL5-208ENST00000624953 POLMQ9NP87 494 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-208ENST00000624953 ZNF358Q9NW07 568 aa6.26□□□□□ -1.41
CDKL5-208ENST00000624953 USP3Q9Y6I4 520 aa6.26□□□□□ -1.41
CDKL5-208ENST00000624953 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 CDK2AP1O14519 115 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 MAN1A2O60476 641 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 THBS1P07996 1170 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 ATP1A2P50993 1020 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 SMTNP53814 917 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 ELOAQ14241 798 aaKnown RBP6.25□□□□□ -1.41
CDKL5-208ENST00000624953 NBPF10Q6P3W6 841 aaKnown RBP6.25□□□□□ -1.41
CDKL5-208ENST00000624953 OGFOD1Q8N543 542 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 NBPF15Q8N660 670 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 GPR161Q8N6U8 529 aaKnown RBP6.25□□□□□ -1.41
CDKL5-208ENST00000624953 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
CDKL5-208ENST00000624953 DNAAF2Q9NVR5 837 aaKnown RBP6.25□□□□□ -1.41
CDKL5-208ENST00000624953 THOC2Q8NI27 1593 aaKnown RBP6.24□□□□□ -1.41
CDKL5-208ENST00000624953 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
CDKL5-208ENST00000624953 MEN1O00255 615 aa6.24□□□□□ -1.41
CDKL5-208ENST00000624953 GSK3AP49840 483 aa6.24□□□□□ -1.41
CDKL5-208ENST00000624953 KRT76Q01546 638 aa6.24□□□□□ -1.41
CDKL5-208ENST00000624953 CCDC102BQ68D86 513 aa6.24□□□□□ -1.41
CDKL5-208ENST00000624953 SCHIP1Q9P0W5 487 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-208ENST00000624953 SERPINA10Q9UK55 444 aa6.24□□□□□ -1.41
CDKL5-208ENST00000624953 A6NJY4 79 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 ARID3CA6NKF2 412 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L15C9J2P7 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L10C9JJH3 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L13C9JLJ4 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L12C9JPN9 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L11C9JVI0 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L21D6R901 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L18D6R9N7 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L22D6RA61 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L17D6RBQ6 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L19D6RCP7 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L20D6RJB6 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 LMOD1P29536 600 aaPredicted RBP6.23□□□□□ -1.41
CDKL5-208ENST00000624953 USP17L24Q0WX57 530 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 UBAP2LQ14157 1087 aaKnown RBP6.23□□□□□ -1.41
CDKL5-208ENST00000624953 CCDC155Q8N6L0 562 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDKL5-208ENST00000624953 C7orf43Q8WVR3 580 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 NLRP3Q96P20 1036 aa6.23□□□□□ -1.41
CDKL5-208ENST00000624953 ATG7O95352 703 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 HIRAP54198 1017 aaPredicted RBP6.22□□□□□ -1.41
CDKL5-208ENST00000624953 FAM69CQ0P6D2 419 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 C4orf17Q53FE4 359 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 TPCN2Q8NHX9 752 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 RHBDD1Q8TEB9 315 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 ZSCAN10Q96SZ4 725 aaPredicted RBP6.22□□□□□ -1.41
CDKL5-208ENST00000624953 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 DYRK1BQ9Y463 629 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 KIF21AQ7Z4S6 1674 aa6.22□□□□□ -1.41
CDKL5-208ENST00000624953 C21orf2O43822 256 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 POU4F2Q12837 409 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 TLR1Q15399 786 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 TAS1R3Q7RTX0 852 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 STAG2Q8N3U4 1231 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 KCTD17Q8N5Z5 321 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 ZDHHC1Q8WTX9 485 aa6.21□□□□□ -1.42
CDKL5-208ENST00000624953 VRTNQ9H8Y1 702 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms