RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 STK31Q9BXU1 1019 aa16.7■□□□□ 0.26
C3orf56-201ENST00000624688 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
C3orf56-201ENST00000624688 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
C3orf56-201ENST00000624688 PKD1L3Q7Z443 1732 aa16.69■□□□□ 0.26
C3orf56-201ENST00000624688 BTBD11A6QL63 1104 aa16.69■□□□□ 0.26
C3orf56-201ENST00000624688 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
C3orf56-201ENST00000624688 NECTIN2Q92692 538 aa16.69■□□□□ 0.26
C3orf56-201ENST00000624688 PLEKHG2Q9H7P9 1386 aa16.69■□□□□ 0.26
C3orf56-201ENST00000624688 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
C3orf56-201ENST00000624688 SCN11AQ9UI33 1791 aa16.68■□□□□ 0.26
C3orf56-201ENST00000624688 F6X3S4 739 aa16.67■□□□□ 0.26
C3orf56-201ENST00000624688 HOXB7P09629 217 aa16.67■□□□□ 0.26
C3orf56-201ENST00000624688 FLIIQ13045 1269 aa16.67■□□□□ 0.26
C3orf56-201ENST00000624688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
C3orf56-201ENST00000624688 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
C3orf56-201ENST00000624688 NUCB1Q02818 461 aa16.67■□□□□ 0.26
C3orf56-201ENST00000624688 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
C3orf56-201ENST00000624688 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
C3orf56-201ENST00000624688 N4BP2Q86UW6 1770 aaPredicted RBP16.66■□□□□ 0.26
C3orf56-201ENST00000624688 PHKG2P15735 406 aa16.66■□□□□ 0.26
C3orf56-201ENST00000624688 ANP32AP39687 249 aaKnown RBP16.66■□□□□ 0.26
C3orf56-201ENST00000624688 PRDM11Q9NQV5 511 aa16.66■□□□□ 0.26
C3orf56-201ENST00000624688 SPG7Q9UQ90 795 aa16.66■□□□□ 0.26
C3orf56-201ENST00000624688 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
C3orf56-201ENST00000624688 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
C3orf56-201ENST00000624688 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
C3orf56-201ENST00000624688 MEIS3Q99687 375 aa16.65■□□□□ 0.26
C3orf56-201ENST00000624688 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
C3orf56-201ENST00000624688 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
C3orf56-201ENST00000624688 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
C3orf56-201ENST00000624688 GCC1Q96CN9 775 aa16.64■□□□□ 0.25
C3orf56-201ENST00000624688 FKBP5Q13451 457 aaPredicted RBP16.63■□□□□ 0.25
C3orf56-201ENST00000624688 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
C3orf56-201ENST00000624688 PXDNLA1KZ92 1463 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 MRC1P22897 1456 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 PARP4Q9UKK3 1724 aaKnown RBP16.62■□□□□ 0.25
C3orf56-201ENST00000624688 CYP27B1O15528 508 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
C3orf56-201ENST00000624688 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 ANKRD44Q8N8A2 993 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
C3orf56-201ENST00000624688 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
C3orf56-201ENST00000624688 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
C3orf56-201ENST00000624688 ROBO1Q9Y6N7 1651 aa16.61■□□□□ 0.25
C3orf56-201ENST00000624688 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
C3orf56-201ENST00000624688 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
C3orf56-201ENST00000624688 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
C3orf56-201ENST00000624688 LNPKQ9C0E8 428 aa16.6■□□□□ 0.25
C3orf56-201ENST00000624688 TOM1L2Q6ZVM7 507 aa16.59■□□□□ 0.25
C3orf56-201ENST00000624688 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
C3orf56-201ENST00000624688 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
C3orf56-201ENST00000624688 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
C3orf56-201ENST00000624688 ANKRD45Q5TZF3 282 aa16.59■□□□□ 0.25
C3orf56-201ENST00000624688 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
C3orf56-201ENST00000624688 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
C3orf56-201ENST00000624688 C5P01031 1676 aa16.58■□□□□ 0.24
C3orf56-201ENST00000624688 SEC24BO95487 1268 aa16.58■□□□□ 0.24
C3orf56-201ENST00000624688 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
C3orf56-201ENST00000624688 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
C3orf56-201ENST00000624688 CARD10Q9BWT7 1032 aa16.57■□□□□ 0.24
C3orf56-201ENST00000624688 SHANK3Q9BYB0 1731 aa16.57■□□□□ 0.24
C3orf56-201ENST00000624688 ANXA1P04083 346 aa16.56■□□□□ 0.24
C3orf56-201ENST00000624688 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
C3orf56-201ENST00000624688 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
C3orf56-201ENST00000624688 COL22A1Q8NFW1 1626 aaPredicted RBP16.56■□□□□ 0.24
C3orf56-201ENST00000624688 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
C3orf56-201ENST00000624688 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
C3orf56-201ENST00000624688 MYT1Q01538 1121 aa16.55■□□□□ 0.24
C3orf56-201ENST00000624688 PROSER3Q2NL68 480 aa16.55■□□□□ 0.24
C3orf56-201ENST00000624688 ADCY9O60503 1353 aa16.55■□□□□ 0.24
C3orf56-201ENST00000624688 GNAI2P04899 355 aa16.54■□□□□ 0.24
C3orf56-201ENST00000624688 GNAI3P08754 354 aa16.54■□□□□ 0.24
C3orf56-201ENST00000624688 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
C3orf56-201ENST00000624688 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
C3orf56-201ENST00000624688 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
C3orf56-201ENST00000624688 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
C3orf56-201ENST00000624688 PCDH11XQ9BZA7 1347 aa16.54■□□□□ 0.24
C3orf56-201ENST00000624688 PCDH11YQ9BZA8 1340 aa16.54■□□□□ 0.24
C3orf56-201ENST00000624688 IL2RBP14784 551 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 GLI3P10071 1580 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 PI4KAP2A4QPH2 592 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 EVA1CP58658 441 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 PDIA6Q15084 440 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 PI4KAP1Q8N8J0 262 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 DNAAF4Q8WXU2 420 aa16.53■□□□□ 0.24
C3orf56-201ENST00000624688 COL14A1Q05707 1796 aaKnown RBP16.52■□□□□ 0.24
C3orf56-201ENST00000624688 COL16A1Q07092 1604 aaPredicted RBP16.52■□□□□ 0.24
C3orf56-201ENST00000624688 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
C3orf56-201ENST00000624688 CABP4P57796 275 aa16.51■□□□□ 0.23
C3orf56-201ENST00000624688 NKX1-1Q15270 411 aaPredicted RBP16.51■□□□□ 0.23
C3orf56-201ENST00000624688 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
C3orf56-201ENST00000624688 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
C3orf56-201ENST00000624688 HMMRO75330 724 aa16.5■□□□□ 0.23
C3orf56-201ENST00000624688 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
C3orf56-201ENST00000624688 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
C3orf56-201ENST00000624688 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
C3orf56-201ENST00000624688 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms