RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
ATRX-211ENST00000623321 PLCH1Q4KWH8 1693 aa19.22■□□□□ 0.67
ATRX-211ENST00000623321 SPATA31A6Q5VVP1 1343 aa19.22■□□□□ 0.67
ATRX-211ENST00000623321 CYP27B1O15528 508 aa19.21■□□□□ 0.67
ATRX-211ENST00000623321 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
ATRX-211ENST00000623321 ADAMTS7Q9UKP4 1686 aa19.21■□□□□ 0.67
ATRX-211ENST00000623321 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
ATRX-211ENST00000623321 FRAT1Q92837 279 aaPredicted RBP19.2■□□□□ 0.66
ATRX-211ENST00000623321 HSPA1LP34931 641 aa19.2■□□□□ 0.66
ATRX-211ENST00000623321 PCDH11XQ9BZA7 1347 aa19.19■□□□□ 0.66
ATRX-211ENST00000623321 PCDH11YQ9BZA8 1340 aa19.19■□□□□ 0.66
ATRX-211ENST00000623321 BRPF1P55201 1214 aaPredicted RBP19.19■□□□□ 0.66
ATRX-211ENST00000623321 DCAF5Q96JK2 942 aa19.19■□□□□ 0.66
ATRX-211ENST00000623321 SLIT2O94813 1529 aa19.19■□□□□ 0.66
ATRX-211ENST00000623321 KRT24Q2M2I5 525 aa19.18■□□□□ 0.66
ATRX-211ENST00000623321 NRAPQ86VF7 1730 aa19.18■□□□□ 0.66
ATRX-211ENST00000623321 NWD2Q9ULI1 1742 aa19.18■□□□□ 0.66
ATRX-211ENST00000623321 BTBD11A6QL63 1104 aa19.18■□□□□ 0.66
ATRX-211ENST00000623321 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
ATRX-211ENST00000623321 AAMPQ13685 434 aa19.17■□□□□ 0.66
ATRX-211ENST00000623321 ZKSCAN2Q63HK3 967 aa19.16■□□□□ 0.66
ATRX-211ENST00000623321 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
ATRX-211ENST00000623321 SOS1Q07889 1333 aaPredicted RBP19.16■□□□□ 0.66
ATRX-211ENST00000623321 KIF16BQ96L93 1317 aa19.16■□□□□ 0.66
ATRX-211ENST00000623321 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
ATRX-211ENST00000623321 THRAP3Q9Y2W1 955 aaKnown RBP19.16■□□□□ 0.66
ATRX-211ENST00000623321 DISP2A7MBM2 1401 aa19.15■□□□□ 0.66
ATRX-211ENST00000623321 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
ATRX-211ENST00000623321 IPO8O15397 1037 aaKnown RBP19.15■□□□□ 0.66
ATRX-211ENST00000623321 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
ATRX-211ENST00000623321 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
ATRX-211ENST00000623321 CLUAP1Q96AJ1 413 aa19.15■□□□□ 0.66
ATRX-211ENST00000623321 NGLY1Q96IV0 654 aa19.15■□□□□ 0.66
ATRX-211ENST00000623321 C8orf37Q96NL8 207 aa19.14■□□□□ 0.65
ATRX-211ENST00000623321 NOB1Q9ULX3 412 aaKnown RBP19.14■□□□□ 0.65
ATRX-211ENST00000623321 SIPA1L3O60292 1781 aaPredicted RBP19.14■□□□□ 0.65
ATRX-211ENST00000623321 KDM3BQ7LBC6 1761 aa19.14■□□□□ 0.65
ATRX-211ENST00000623321 RGS3P49796 1198 aa19.14■□□□□ 0.65
ATRX-211ENST00000623321 UNC5CLQ8IV45 518 aa19.14■□□□□ 0.65
ATRX-211ENST00000623321 DDX54Q8TDD1 881 aaKnown RBP19.14■□□□□ 0.65
ATRX-211ENST00000623321 CDCA7Q9BWT1 371 aaPredicted RBP19.14■□□□□ 0.65
ATRX-211ENST00000623321 EIF4A1P60842 406 aaKnown RBP19.13■□□□□ 0.65
ATRX-211ENST00000623321 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
ATRX-211ENST00000623321 SPATA31A7Q8IWB4 1347 aa19.13■□□□□ 0.65
ATRX-211ENST00000623321 IGHDP01880 384 aa19.12■□□□□ 0.65
ATRX-211ENST00000623321 ATF7IPQ6VMQ6 1270 aa19.12■□□□□ 0.65
ATRX-211ENST00000623321 FNBP4Q8N3X1 1017 aaPredicted RBP19.12■□□□□ 0.65
ATRX-211ENST00000623321 NFATC2IPQ8NCF5 419 aa19.12■□□□□ 0.65
ATRX-211ENST00000623321 SHANK3Q9BYB0 1731 aa19.12■□□□□ 0.65
ATRX-211ENST00000623321 LRP6O75581 1613 aa19.12■□□□□ 0.65
ATRX-211ENST00000623321 PANK1Q8TE04 598 aa19.11■□□□□ 0.65
ATRX-211ENST00000623321 MRC1P22897 1456 aa19.11■□□□□ 0.65
ATRX-211ENST00000623321 KCNQ3O43525 872 aa19.11■□□□□ 0.65
ATRX-211ENST00000623321 ARHGAP45Q92619 1136 aa19.11■□□□□ 0.65
ATRX-211ENST00000623321 ERVV-2B6SEH9 535 aa19.1■□□□□ 0.65
ATRX-211ENST00000623321 EXOC5O00471 708 aa19.1■□□□□ 0.65
ATRX-211ENST00000623321 TRIM27P14373 513 aa19.1■□□□□ 0.65
ATRX-211ENST00000623321 CABP4P57796 275 aa19.1■□□□□ 0.65
ATRX-211ENST00000623321 DZIP1LQ8IYY4 767 aaKnown RBP19.1■□□□□ 0.65
ATRX-211ENST00000623321 BCL9LQ86UU0 1499 aa19.1■□□□□ 0.65
ATRX-211ENST00000623321 HOXB7P09629 217 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 TNNQ9UQP3 1299 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 COG6Q9Y2V7 657 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 CCDC9Q9Y3X0 531 aaKnown RBP19.09■□□□□ 0.65
ATRX-211ENST00000623321 RLBP1P12271 317 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 BARGINQ6ZT62 677 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 FTSJ3Q8IY81 847 aaKnown RBP19.09■□□□□ 0.65
ATRX-211ENST00000623321 CHMP4AQ9BY43 222 aa19.09■□□□□ 0.65
ATRX-211ENST00000623321 WNK3Q9BYP7 1800 aa19.08■□□□□ 0.65
ATRX-211ENST00000623321 VPS72Q15906 364 aa19.08■□□□□ 0.65
ATRX-211ENST00000623321 ZNF790Q6PG37 636 aa19.08■□□□□ 0.65
ATRX-211ENST00000623321 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.65
ATRX-211ENST00000623321 HEG1Q9ULI3 1381 aa19.07■□□□□ 0.64
ATRX-211ENST00000623321 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
ATRX-211ENST00000623321 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
ATRX-211ENST00000623321 STK31Q9BXU1 1019 aa19.07■□□□□ 0.64
ATRX-211ENST00000623321 USP21Q9UK80 565 aa19.06■□□□□ 0.64
ATRX-211ENST00000623321 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
ATRX-211ENST00000623321 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
ATRX-211ENST00000623321 TNS2Q63HR2 1409 aa19.05■□□□□ 0.64
ATRX-211ENST00000623321 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
ATRX-211ENST00000623321 DDB1Q16531 1140 aa19.05■□□□□ 0.64
ATRX-211ENST00000623321 HDGFL1Q5TGJ6 251 aa19.05■□□□□ 0.64
ATRX-211ENST00000623321 MVPQ14764 893 aaKnown RBP19.04■□□□□ 0.64
ATRX-211ENST00000623321 TTC5Q8N0Z6 440 aa19.04■□□□□ 0.64
ATRX-211ENST00000623321 PTPRCP08575 1304 aa19.03■□□□□ 0.64
ATRX-211ENST00000623321 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.02■□□□□ 0.64
ATRX-211ENST00000623321 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
ATRX-211ENST00000623321 NFKBIBQ15653 356 aa19.02■□□□□ 0.64
ATRX-211ENST00000623321 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
ATRX-211ENST00000623321 SLC4A3P48751 1232 aa19.01■□□□□ 0.63
ATRX-211ENST00000623321 TMEM57Q8N5G2 664 aa19.01■□□□□ 0.63
ATRX-211ENST00000623321 ZNF496Q96IT1 587 aaPredicted RBP19.01■□□□□ 0.63
ATRX-211ENST00000623321 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
ATRX-211ENST00000623321 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
ATRX-211ENST00000623321 ABCC4O15439 1325 aa19■□□□□ 0.63
ATRX-211ENST00000623321 CACNA1FO60840 1977 aa19■□□□□ 0.63
ATRX-211ENST00000623321 TMOD3Q9NYL9 352 aa19■□□□□ 0.63
ATRX-211ENST00000623321 TOGARAM1Q9Y4F4 1720 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms