RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 MTHFSP49914 203 aa15.5■□□□□ 0.07
LINC00649-218ENST00000620580 GPR162Q16538 588 aa15.5■□□□□ 0.07
LINC00649-218ENST00000620580 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
LINC00649-218ENST00000620580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
LINC00649-218ENST00000620580 ERVV-2B6SEH9 535 aa15.49■□□□□ 0.07
LINC00649-218ENST00000620580 AMOTQ4VCS5 1084 aa15.49■□□□□ 0.07
LINC00649-218ENST00000620580 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
LINC00649-218ENST00000620580 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
LINC00649-218ENST00000620580 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
LINC00649-218ENST00000620580 HSP90AB1P08238 724 aaKnown RBP15.48■□□□□ 0.07
LINC00649-218ENST00000620580 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
LINC00649-218ENST00000620580 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
LINC00649-218ENST00000620580 GNPATO15228 680 aa15.47■□□□□ 0.07
LINC00649-218ENST00000620580 HMOX1P09601 288 aa15.47■□□□□ 0.07
LINC00649-218ENST00000620580 CABP4P57796 275 aa15.47■□□□□ 0.07
LINC00649-218ENST00000620580 KDRP35968 1356 aa15.47■□□□□ 0.07
LINC00649-218ENST00000620580 PLEKHG2Q9H7P9 1386 aa15.47■□□□□ 0.07
LINC00649-218ENST00000620580 HMGB2P26583 209 aaKnown RBP15.46■□□□□ 0.07
LINC00649-218ENST00000620580 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.07
LINC00649-218ENST00000620580 NFATC2IPQ8NCF5 419 aa15.46■□□□□ 0.07
LINC00649-218ENST00000620580 YBX3P16989 372 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00649-218ENST00000620580 SSFA2P28290 1259 aa15.45■□□□□ 0.06
LINC00649-218ENST00000620580 ZNF784Q8NCA9 323 aaPredicted RBP15.45■□□□□ 0.06
LINC00649-218ENST00000620580 LGR6Q9HBX8 967 aa15.44■□□□□ 0.06
LINC00649-218ENST00000620580 CHD4Q14839 1912 aa15.44■□□□□ 0.06
LINC00649-218ENST00000620580 PTCD1O75127 700 aaKnown RBP15.43■□□□□ 0.06
LINC00649-218ENST00000620580 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
LINC00649-218ENST00000620580 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
LINC00649-218ENST00000620580 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
LINC00649-218ENST00000620580 MTHFSDQ2M296 383 aaKnown RBP15.41■□□□□ 0.06
LINC00649-218ENST00000620580 AKAP4Q5JQC9 854 aa15.41■□□□□ 0.06
LINC00649-218ENST00000620580 TRAPPC3LQ5T215 181 aa15.41■□□□□ 0.06
LINC00649-218ENST00000620580 RTCBQ9Y3I0 505 aaKnown RBP15.41■□□□□ 0.06
LINC00649-218ENST00000620580 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
LINC00649-218ENST00000620580 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
LINC00649-218ENST00000620580 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
LINC00649-218ENST00000620580 RC3H1Q5TC82 1133 aaKnown RBP15.39■□□□□ 0.05
LINC00649-218ENST00000620580 CNTNAP4Q9C0A0 1308 aa15.39■□□□□ 0.05
LINC00649-218ENST00000620580 NPC1L1Q9UHC9 1359 aa15.38■□□□□ 0.05
LINC00649-218ENST00000620580 RNMTO43148 476 aaKnown RBP15.38■□□□□ 0.05
LINC00649-218ENST00000620580 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
LINC00649-218ENST00000620580 MMP10P09238 476 aa15.38■□□□□ 0.05
LINC00649-218ENST00000620580 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
LINC00649-218ENST00000620580 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
LINC00649-218ENST00000620580 SCN11AQ9UI33 1791 aa15.38■□□□□ 0.05
LINC00649-218ENST00000620580 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
LINC00649-218ENST00000620580 CRKLP46109 303 aaKnown RBP15.37■□□□□ 0.05
LINC00649-218ENST00000620580 COL3A1P02461 1466 aaPredicted RBP15.37■□□□□ 0.05
LINC00649-218ENST00000620580 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
LINC00649-218ENST00000620580 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
LINC00649-218ENST00000620580 DNAJC10Q8IXB1 793 aa15.36■□□□□ 0.05
LINC00649-218ENST00000620580 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
LINC00649-218ENST00000620580 GYS1P13807 737 aa15.35■□□□□ 0.05
LINC00649-218ENST00000620580 RFC4P35249 363 aa15.35■□□□□ 0.05
LINC00649-218ENST00000620580 SRP68Q9UHB9 627 aaKnown RBP15.35■□□□□ 0.05
LINC00649-218ENST00000620580 ADRA2BP18089 450 aa15.34■□□□□ 0.05
LINC00649-218ENST00000620580 INTS5Q6P9B9 1019 aaKnown RBP15.34■□□□□ 0.05
LINC00649-218ENST00000620580 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
LINC00649-218ENST00000620580 TJP1Q07157 1748 aa15.33■□□□□ 0.04
LINC00649-218ENST00000620580 VIRMAQ69YN4 1812 aaKnown RBP15.32■□□□□ 0.04
LINC00649-218ENST00000620580 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
LINC00649-218ENST00000620580 FKBP8Q14318 412 aa15.31■□□□□ 0.04
LINC00649-218ENST00000620580 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
LINC00649-218ENST00000620580 MRC1P22897 1456 aa15.31■□□□□ 0.04
LINC00649-218ENST00000620580 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
LINC00649-218ENST00000620580 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
LINC00649-218ENST00000620580 C4AP0C0L4 1744 aa15.3■□□□□ 0.04
LINC00649-218ENST00000620580 CYP19A1P11511 503 aaPredicted RBP15.3■□□□□ 0.04
LINC00649-218ENST00000620580 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
LINC00649-218ENST00000620580 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
LINC00649-218ENST00000620580 PRKAR2BP31323 418 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 DDR1Q08345 913 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
LINC00649-218ENST00000620580 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
LINC00649-218ENST00000620580 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
LINC00649-218ENST00000620580 SOS1Q07889 1333 aaPredicted RBP15.28■□□□□ 0.04
LINC00649-218ENST00000620580 GNAT3A8MTJ3 354 aa15.28■□□□□ 0.04
LINC00649-218ENST00000620580 DPEP1P16444 411 aa15.28■□□□□ 0.04
LINC00649-218ENST00000620580 GAS2L2Q8NHY3 880 aa15.28■□□□□ 0.04
LINC00649-218ENST00000620580 C10orf71Q711Q0 1435 aa15.27■□□□□ 0.04
LINC00649-218ENST00000620580 N4BP2Q86UW6 1770 aaPredicted RBP15.27■□□□□ 0.04
LINC00649-218ENST00000620580 TGFB2P61812 414 aa15.27■□□□□ 0.04
LINC00649-218ENST00000620580 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
LINC00649-218ENST00000620580 CFAP53Q96M91 514 aa15.27■□□□□ 0.04
LINC00649-218ENST00000620580 KCNQ3O43525 872 aa15.26■□□□□ 0.03
LINC00649-218ENST00000620580 U2AF1L5P0DN76 240 aaPredicted RBP15.26■□□□□ 0.03
LINC00649-218ENST00000620580 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
LINC00649-218ENST00000620580 C1QTNF8P60827 252 aa15.26■□□□□ 0.03
LINC00649-218ENST00000620580 U2AF1Q01081 240 aaKnown RBP eCLIP15.26■□□□□ 0.03
LINC00649-218ENST00000620580 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
LINC00649-218ENST00000620580 BCS1LQ9Y276 419 aa15.26■□□□□ 0.03
LINC00649-218ENST00000620580 KIF13BQ9NQT8 1826 aa15.26■□□□□ 0.03
LINC00649-218ENST00000620580 KIAA1551Q9HCM1 1747 aa15.26■□□□□ 0.03
LINC00649-218ENST00000620580 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
LINC00649-218ENST00000620580 ZPR1O75312 459 aa15.25■□□□□ 0.03
LINC00649-218ENST00000620580 TM4SF1P30408 202 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms