RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 PTK7Q13308 1070 aa7.43□□□□□ -1.22
CBWD1-229ENST00000620292 MTFR1Q15390 333 aa7.43□□□□□ -1.22
CBWD1-229ENST00000620292 WDR44Q5JSH3 913 aa7.43□□□□□ -1.22
CBWD1-229ENST00000620292 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
CBWD1-229ENST00000620292 LYSMD3Q7Z3D4 306 aa7.43□□□□□ -1.22
CBWD1-229ENST00000620292 RASA1P20936 1047 aa7.42□□□□□ -1.22
CBWD1-229ENST00000620292 CRTC2Q53ET0 693 aaPredicted RBP7.42□□□□□ -1.22
CBWD1-229ENST00000620292 NPAS3Q8IXF0 933 aa7.42□□□□□ -1.22
CBWD1-229ENST00000620292 ZNF358Q9NW07 568 aa7.42□□□□□ -1.22
CBWD1-229ENST00000620292 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
CBWD1-229ENST00000620292 SOBPA7XYQ1 873 aa7.41□□□□□ -1.22
CBWD1-229ENST00000620292 BACH1O14867 736 aa7.41□□□□□ -1.22
CBWD1-229ENST00000620292 SMTNP53814 917 aa7.41□□□□□ -1.22
CBWD1-229ENST00000620292 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
CBWD1-229ENST00000620292 LARP1Q6PKG0 1096 aaKnown RBP7.41□□□□□ -1.22
CBWD1-229ENST00000620292 PPARGC1BQ86YN6 1023 aaKnown RBP7.41□□□□□ -1.22
CBWD1-229ENST00000620292 TPCN2Q8NHX9 752 aa7.41□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L21D6R901 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 EPHA4P54764 986 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 PSME1Q06323 249 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 TLR1Q15399 786 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 SLC27A3Q5K4L6 730 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
CBWD1-229ENST00000620292 PBXIP1Q96AQ6 731 aa7.4□□□□□ -1.22
CBWD1-229ENST00000620292 ZSCAN10Q96SZ4 725 aaPredicted RBP7.4□□□□□ -1.22
CBWD1-229ENST00000620292 IQSEC3Q9UPP2 1182 aaPredicted RBP7.4□□□□□ -1.22
CBWD1-229ENST00000620292 SENP3-EIF4A1A0A087X0R7 540 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 SLC35F4A4IF30 521 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 A6NJY4 79 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 CDK2AP1O14519 115 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 ATG7O95352 703 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 RFX1P22670 979 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 ANKMY2Q8IV38 441 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 ARXQ96QS3 562 aa7.39□□□□□ -1.23
CBWD1-229ENST00000620292 NXF1Q9UBU9 619 aaKnown RBP7.39□□□□□ -1.23
CBWD1-229ENST00000620292 SUPT5HO00267 1087 aaKnown RBP7.38□□□□□ -1.23
CBWD1-229ENST00000620292 SEC13P55735 322 aa7.38□□□□□ -1.23
CBWD1-229ENST00000620292 FOXK2Q01167 660 aa7.38□□□□□ -1.23
CBWD1-229ENST00000620292 PTSQ03393 145 aa7.38□□□□□ -1.23
CBWD1-229ENST00000620292 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
CBWD1-229ENST00000620292 NBPF10Q6P3W6 841 aaKnown RBP7.38□□□□□ -1.23
CBWD1-229ENST00000620292 PRICKLE2Q7Z3G6 844 aa7.38□□□□□ -1.23
CBWD1-229ENST00000620292 NBPF15Q8N660 670 aa7.38□□□□□ -1.23
CBWD1-229ENST00000620292 RHBDD1Q8TEB9 315 aa7.38□□□□□ -1.23
CBWD1-229ENST00000620292 ZNF594Q96JF6 807 aaPredicted RBP7.38□□□□□ -1.23
CBWD1-229ENST00000620292 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-229ENST00000620292 PPP1R15AO75807 674 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-229ENST00000620292 POU4F2Q12837 409 aa7.37□□□□□ -1.23
CBWD1-229ENST00000620292 TAS1R3Q7RTX0 852 aa7.37□□□□□ -1.23
CBWD1-229ENST00000620292 SCHIP1Q9P0W5 487 aaPredicted RBP7.37□□□□□ -1.23
CBWD1-229ENST00000620292 SERTAD1Q9UHV2 236 aa7.37□□□□□ -1.23
CBWD1-229ENST00000620292 CCDC180Q9P1Z9 1646 aa7.37□□□□□ -1.23
CBWD1-229ENST00000620292 DPYDQ12882 1025 aa7.36□□□□□ -1.23
CBWD1-229ENST00000620292 GNASQ5JWF2 1037 aa7.36□□□□□ -1.23
CBWD1-229ENST00000620292 TMEM214Q6NUQ4 689 aaKnown RBP7.36□□□□□ -1.23
CBWD1-229ENST00000620292 DYRK1BQ9Y463 629 aa7.36□□□□□ -1.23
CBWD1-229ENST00000620292 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
CBWD1-229ENST00000620292 SFI1A8K8P3 1242 aa7.35□□□□□ -1.23
CBWD1-229ENST00000620292 TERTO14746 1132 aaKnown RBP7.35□□□□□ -1.23
CBWD1-229ENST00000620292 PPFIA3O75145 1194 aa7.35□□□□□ -1.23
CBWD1-229ENST00000620292 GTF2E1P29083 439 aaPredicted RBP7.35□□□□□ -1.23
CBWD1-229ENST00000620292 C4orf17Q53FE4 359 aa7.35□□□□□ -1.23
CBWD1-229ENST00000620292 POTEAQ6S8J7 498 aa7.35□□□□□ -1.23
CBWD1-229ENST00000620292 TREML4Q6UXN2 200 aa7.35□□□□□ -1.23
CBWD1-229ENST00000620292 H3BM21 787 aa7.34□□□□□ -1.23
CBWD1-229ENST00000620292 RHOQP17081 205 aa7.34□□□□□ -1.23
CBWD1-229ENST00000620292 NFX1Q12986 1120 aaKnown RBP7.34□□□□□ -1.23
CBWD1-229ENST00000620292 CDCA8Q53HL2 280 aa7.34□□□□□ -1.23
CBWD1-229ENST00000620292 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
CBWD1-229ENST00000620292 NIFKQ9BYG3 293 aaKnown RBP7.34□□□□□ -1.23
CBWD1-229ENST00000620292 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
CBWD1-229ENST00000620292 NOVA2Q9UNW9 492 aaKnown RBP7.34□□□□□ -1.23
CBWD1-229ENST00000620292 USP3Q9Y6I4 520 aa7.34□□□□□ -1.23
CBWD1-229ENST00000620292 VSIG8P0DPA2 414 aa7.33□□□□□ -1.24
CBWD1-229ENST00000620292 TNS4Q8IZW8 715 aa7.33□□□□□ -1.24
CBWD1-229ENST00000620292 STAG2Q8N3U4 1231 aa7.33□□□□□ -1.24
CBWD1-229ENST00000620292 TSEN2Q8NCE0 465 aaKnown RBP7.33□□□□□ -1.24
CBWD1-229ENST00000620292 GAS2L2Q8NHY3 880 aa7.33□□□□□ -1.24
CBWD1-229ENST00000620292 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
CBWD1-229ENST00000620292 NANOS1Q8WY41 292 aaKnown RBP7.33□□□□□ -1.24
CBWD1-229ENST00000620292 A0A1B0GTH6 734 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 ITGA6P23229 1130 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 TEAD4Q15561 434 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 SWI5Q1ZZU3 235 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 SLC9A9Q8IVB4 645 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 TIMMDC1Q9NPL8 285 aa7.32□□□□□ -1.24
CBWD1-229ENST00000620292 ACIN1Q9UKV3 1341 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms