RNA–Protein interactions for RNA: ENST00000619923.1

SLC46A1-209, Transcript of solute carrier family 46 member 1, humanhuman

Gene SLC46A1, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-209ENST00000619923 NRXN2Q9P2S2 1712 aa11.04□□□□□ -0.64
SLC46A1-209ENST00000619923 AK7Q96M32 723 aa11.03□□□□□ -0.64
SLC46A1-209ENST00000619923 EYA1Q99502 592 aa11.03□□□□□ -0.64
SLC46A1-209ENST00000619923 ASAP1Q9ULH1 1129 aa11.03□□□□□ -0.64
SLC46A1-209ENST00000619923 TIAM2Q8IVF5 1701 aa11.03□□□□□ -0.64
SLC46A1-209ENST00000619923 TNRC6CQ9HCJ0 1690 aaKnown RBP11.02□□□□□ -0.64
SLC46A1-209ENST00000619923 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.65
SLC46A1-209ENST00000619923 SSFA2P28290 1259 aa11.02□□□□□ -0.65
SLC46A1-209ENST00000619923 SIK1P57059 783 aa11.02□□□□□ -0.65
SLC46A1-209ENST00000619923 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.65
SLC46A1-209ENST00000619923 WASHC2AQ641Q2 1341 aa11.02□□□□□ -0.65
SLC46A1-209ENST00000619923 KIF3CO14782 793 aa11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 PHKG2P15735 406 aa11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 IFFO2Q5TF58 517 aa11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 ATG3Q9NT62 314 aa11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 ANKRD31Q8N7Z5 1873 aa11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 COL11A2P13942 1736 aaPredicted RBP11.01□□□□□ -0.65
SLC46A1-209ENST00000619923 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
SLC46A1-209ENST00000619923 SMARCC1Q92922 1105 aaPredicted RBP11□□□□□ -0.65
SLC46A1-209ENST00000619923 POLKQ9UBT6 870 aa11□□□□□ -0.65
SLC46A1-209ENST00000619923 PLEKHG2Q9H7P9 1386 aa11□□□□□ -0.65
SLC46A1-209ENST00000619923 CACNA1SQ13698 1873 aa11□□□□□ -0.65
SLC46A1-209ENST00000619923 MRC1P22897 1456 aa11□□□□□ -0.65
SLC46A1-209ENST00000619923 GNPATO15228 680 aa10.99□□□□□ -0.65
SLC46A1-209ENST00000619923 HSPA6P17066 643 aa10.99□□□□□ -0.65
SLC46A1-209ENST00000619923 EIF4A2Q14240 407 aaKnown RBP10.99□□□□□ -0.65
SLC46A1-209ENST00000619923 GPBP1L1Q9HC44 474 aaPredicted RBP10.99□□□□□ -0.65
SLC46A1-209ENST00000619923 MMP10P09238 476 aa10.98□□□□□ -0.65
SLC46A1-209ENST00000619923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
SLC46A1-209ENST00000619923 TMOD3Q9NYL9 352 aa10.98□□□□□ -0.65
SLC46A1-209ENST00000619923 SCN7AQ01118 1682 aa10.98□□□□□ -0.65
SLC46A1-209ENST00000619923 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
SLC46A1-209ENST00000619923 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
SLC46A1-209ENST00000619923 SLC24A1O60721 1099 aa10.97□□□□□ -0.65
SLC46A1-209ENST00000619923 SPG7Q9UQ90 795 aa10.97□□□□□ -0.65
SLC46A1-209ENST00000619923 KCPQ6ZWJ8 1503 aa10.97□□□□□ -0.65
SLC46A1-209ENST00000619923 CNTNAP4Q9C0A0 1308 aa10.96□□□□□ -0.65
SLC46A1-209ENST00000619923 ATP6V1AP38606 617 aa10.96□□□□□ -0.65
SLC46A1-209ENST00000619923 ARFGEF2Q9Y6D5 1785 aa10.95□□□□□ -0.66
SLC46A1-209ENST00000619923 GYS1P13807 737 aa10.95□□□□□ -0.66
SLC46A1-209ENST00000619923 KCNA3P22001 575 aa10.95□□□□□ -0.66
SLC46A1-209ENST00000619923 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
SLC46A1-209ENST00000619923 IFNL2Q8IZJ0 200 aa10.95□□□□□ -0.66
SLC46A1-209ENST00000619923 BCORQ6W2J9 1755 aa10.95□□□□□ -0.66
SLC46A1-209ENST00000619923 FER1L6Q2WGJ9 1857 aa10.94□□□□□ -0.66
SLC46A1-209ENST00000619923 A0A0G2JLW4 131 aa10.94□□□□□ -0.66
SLC46A1-209ENST00000619923 DPEP1P16444 411 aa10.93□□□□□ -0.66
SLC46A1-209ENST00000619923 TNNT2P45379 298 aaPredicted RBP10.93□□□□□ -0.66
SLC46A1-209ENST00000619923 DDR1Q08345 913 aa10.93□□□□□ -0.66
SLC46A1-209ENST00000619923 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
SLC46A1-209ENST00000619923 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
SLC46A1-209ENST00000619923 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
SLC46A1-209ENST00000619923 SRP68Q9UHB9 627 aaKnown RBP10.92□□□□□ -0.66
SLC46A1-209ENST00000619923 ERVV-2B6SEH9 535 aa10.91□□□□□ -0.66
SLC46A1-209ENST00000619923 RC3H1Q5TC82 1133 aaKnown RBP10.91□□□□□ -0.66
SLC46A1-209ENST00000619923 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
SLC46A1-209ENST00000619923 USP42Q9H9J4 1324 aaKnown RBP10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 ADRA2BP18089 450 aa10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 TGFB2P61812 414 aa10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 ZNF530Q6P9A1 599 aaPredicted RBP10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 BCS1LQ9Y276 419 aa10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 RTCBQ9Y3I0 505 aaKnown RBP10.9□□□□□ -0.66
SLC46A1-209ENST00000619923 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.67
SLC46A1-209ENST00000619923 CRKLP46109 303 aaKnown RBP10.89□□□□□ -0.67
SLC46A1-209ENST00000619923 PRELPP51888 382 aa10.89□□□□□ -0.67
SLC46A1-209ENST00000619923 HTRA3P83110 453 aa10.89□□□□□ -0.67
SLC46A1-209ENST00000619923 FKBP8Q14318 412 aa10.89□□□□□ -0.67
SLC46A1-209ENST00000619923 TRAPPC3LQ5T215 181 aa10.89□□□□□ -0.67
SLC46A1-209ENST00000619923 DCAF5Q96JK2 942 aa10.89□□□□□ -0.67
SLC46A1-209ENST00000619923 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
SLC46A1-209ENST00000619923 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
SLC46A1-209ENST00000619923 NLGN1Q8N2Q7 840 aa10.88□□□□□ -0.67
SLC46A1-209ENST00000619923 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
SLC46A1-209ENST00000619923 POLRMTO00411 1230 aaKnown RBP10.87□□□□□ -0.67
SLC46A1-209ENST00000619923 CHRNA5P30532 468 aa10.87□□□□□ -0.67
SLC46A1-209ENST00000619923 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
SLC46A1-209ENST00000619923 SOS1Q07889 1333 aaPredicted RBP10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 PTCD1O75127 700 aaKnown RBP10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 TOMM70O94826 608 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 FCHSD2O94868 740 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 RFC4P35249 363 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 APLP1P51693 650 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 C9orf131Q5VYM1 1079 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 ARHGAP27Q6ZUM4 889 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 NFATC2IPQ8NCF5 419 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 PANK3Q9H999 370 aa10.86□□□□□ -0.67
SLC46A1-209ENST00000619923 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
SLC46A1-209ENST00000619923 IL13P35225 146 aa10.85□□□□□ -0.67
SLC46A1-209ENST00000619923 PLEKHO1Q53GL0 409 aaPredicted RBP10.85□□□□□ -0.67
SLC46A1-209ENST00000619923 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
SLC46A1-209ENST00000619923 COL15A1P39059 1388 aa10.85□□□□□ -0.67
SLC46A1-209ENST00000619923 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
SLC46A1-209ENST00000619923 TM4SF1P30408 202 aa10.84□□□□□ -0.67
SLC46A1-209ENST00000619923 CABP4P57796 275 aa10.84□□□□□ -0.67
SLC46A1-209ENST00000619923 RASSF7Q02833 373 aa10.84□□□□□ -0.67
SLC46A1-209ENST00000619923 SULT6B1Q6IMI4 303 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms