RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 CCDC82Q8N4S0 544 aa10.87□□□□□ -0.67
SENP3-210ENST00000619785 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.87□□□□□ -0.67
SENP3-210ENST00000619785 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
SENP3-210ENST00000619785 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
SENP3-210ENST00000619785 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
SENP3-210ENST00000619785 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
SENP3-210ENST00000619785 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
SENP3-210ENST00000619785 PADI6Q6TGC4 694 aa10.86□□□□□ -0.67
SENP3-210ENST00000619785 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
SENP3-210ENST00000619785 STK26Q9P289 416 aa10.86□□□□□ -0.67
SENP3-210ENST00000619785 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
SENP3-210ENST00000619785 PXYLP1Q8TE99 480 aa10.85□□□□□ -0.67
SENP3-210ENST00000619785 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
SENP3-210ENST00000619785 CCDC9Q9Y3X0 531 aaKnown RBP10.85□□□□□ -0.67
SENP3-210ENST00000619785 MYOM1P52179 1685 aa10.85□□□□□ -0.67
SENP3-210ENST00000619785 PRR36Q9H6K5 1346 aa10.84□□□□□ -0.67
SENP3-210ENST00000619785 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
SENP3-210ENST00000619785 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
SENP3-210ENST00000619785 ITGAEP38570 1179 aa10.84□□□□□ -0.67
SENP3-210ENST00000619785 DIXDC1Q155Q3 683 aa10.84□□□□□ -0.67
SENP3-210ENST00000619785 BCL9O00512 1426 aa10.84□□□□□ -0.67
SENP3-210ENST00000619785 SSH2Q76I76 1423 aa10.84□□□□□ -0.67
SENP3-210ENST00000619785 COL18A1P39060 1754 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 CPDO75976 1380 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 GPRASP1Q5JY77 1395 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 CLK2P49760 499 aaKnown RBP10.83□□□□□ -0.68
SENP3-210ENST00000619785 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 MYSM1Q5VVJ2 828 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 ADGRG1Q9Y653 693 aa10.83□□□□□ -0.68
SENP3-210ENST00000619785 C11orf95C9JLR9 678 aaPredicted RBP10.82□□□□□ -0.68
SENP3-210ENST00000619785 FOSBP53539 338 aa10.82□□□□□ -0.68
SENP3-210ENST00000619785 ZNF454Q8N9F8 522 aa10.82□□□□□ -0.68
SENP3-210ENST00000619785 RBM46Q8TBY0 533 aaKnown RBP10.82□□□□□ -0.68
SENP3-210ENST00000619785 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
SENP3-210ENST00000619785 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
SENP3-210ENST00000619785 POLR3AO14802 1390 aaPredicted RBP10.81□□□□□ -0.68
SENP3-210ENST00000619785 KIAA0232Q92628 1395 aa10.81□□□□□ -0.68
SENP3-210ENST00000619785 KCNQ2O43526 872 aa10.81□□□□□ -0.68
SENP3-210ENST00000619785 TRIM37O94972 964 aa10.81□□□□□ -0.68
SENP3-210ENST00000619785 PRAM1Q96QH2 718 aa10.81□□□□□ -0.68
SENP3-210ENST00000619785 SPON1Q9HCB6 807 aa10.81□□□□□ -0.68
SENP3-210ENST00000619785 SPDYE5A6NIY4 337 aa10.8□□□□□ -0.68
SENP3-210ENST00000619785 APBA3O96018 575 aa10.8□□□□□ -0.68
SENP3-210ENST00000619785 PMFBP1Q8TBY8 1022 aa10.8□□□□□ -0.68
SENP3-210ENST00000619785 CCDC97Q96F63 343 aaPredicted RBP10.8□□□□□ -0.68
SENP3-210ENST00000619785 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.8□□□□□ -0.68
SENP3-210ENST00000619785 KIAA1210Q9ULL0 1709 aa10.8□□□□□ -0.68
SENP3-210ENST00000619785 PAPPAQ13219 1627 aa10.8□□□□□ -0.68
SENP3-210ENST00000619785 PLSCR1O15162 318 aa10.79□□□□□ -0.68
SENP3-210ENST00000619785 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
SENP3-210ENST00000619785 TBC1D2Q9BYX2 928 aa10.79□□□□□ -0.68
SENP3-210ENST00000619785 PRDM11Q9NQV5 511 aa10.79□□□□□ -0.68
SENP3-210ENST00000619785 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
SENP3-210ENST00000619785 USP19O94966 1318 aa10.79□□□□□ -0.68
SENP3-210ENST00000619785 AATKQ6ZMQ8 1374 aa10.78□□□□□ -0.68
SENP3-210ENST00000619785 A0A0G2JS52 829 aa10.78□□□□□ -0.68
SENP3-210ENST00000619785 WASLO00401 505 aaPredicted RBP10.78□□□□□ -0.68
SENP3-210ENST00000619785 MYT1Q01538 1121 aa10.78□□□□□ -0.68
SENP3-210ENST00000619785 NBPF8Q3BBV2 869 aa10.78□□□□□ -0.68
SENP3-210ENST00000619785 NBPF14Q5TI25 921 aa10.78□□□□□ -0.68
SENP3-210ENST00000619785 COL5A2P05997 1499 aaPredicted RBP10.78□□□□□ -0.68
SENP3-210ENST00000619785 MAP3K5Q99683 1374 aa10.77□□□□□ -0.68
SENP3-210ENST00000619785 OVOS2A0A0G2JMS6 1433 aa10.77□□□□□ -0.68
SENP3-210ENST00000619785 OVOS2A0A0J9YW53 1432 aa10.77□□□□□ -0.68
SENP3-210ENST00000619785 OVOS2Q6IE36 1432 aa10.77□□□□□ -0.68
SENP3-210ENST00000619785 RGL3Q3MIN7 710 aa10.77□□□□□ -0.69
SENP3-210ENST00000619785 BANK1Q8NDB2 785 aa10.77□□□□□ -0.69
SENP3-210ENST00000619785 POM121Q96HA1 1249 aa10.77□□□□□ -0.69
SENP3-210ENST00000619785 MPHOSPH9Q99550 1183 aa10.77□□□□□ -0.69
SENP3-210ENST00000619785 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.69
SENP3-210ENST00000619785 SLIT3O75094 1523 aa10.77□□□□□ -0.69
SENP3-210ENST00000619785 ZBTB7CA1YPR0 619 aa10.76□□□□□ -0.69
SENP3-210ENST00000619785 PRSS12P56730 875 aa10.76□□□□□ -0.69
SENP3-210ENST00000619785 ZNF784Q8NCA9 323 aaPredicted RBP10.76□□□□□ -0.69
SENP3-210ENST00000619785 RFC5P40937 340 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 TMEM259Q4ZIN3 620 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 TTC13Q8NBP0 860 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 TRPM1Q7Z4N2 1603 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 BRD4O60885 1362 aaPredicted RBP10.75□□□□□ -0.69
SENP3-210ENST00000619785 RGPD5Q99666 1765 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 CRB1P82279 1406 aa10.75□□□□□ -0.69
SENP3-210ENST00000619785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.74□□□□□ -0.69
SENP3-210ENST00000619785 TCP11L2Q8N4U5 519 aa10.74□□□□□ -0.69
SENP3-210ENST00000619785 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
SENP3-210ENST00000619785 STAC3Q96MF2 364 aa10.74□□□□□ -0.69
SENP3-210ENST00000619785 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
SENP3-210ENST00000619785 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
SENP3-210ENST00000619785 COG6Q9Y2V7 657 aa10.73□□□□□ -0.69
SENP3-210ENST00000619785 ABCC6O95255 1503 aa10.73□□□□□ -0.69
SENP3-210ENST00000619785 USP54Q70EL1 1684 aa10.73□□□□□ -0.69
SENP3-210ENST00000619785 RIMBP2O15034 1052 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 NUDT7P0C024 238 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 CHRNA2Q15822 529 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 IFFO2Q5TF58 517 aa10.72□□□□□ -0.69
SENP3-210ENST00000619785 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
SENP3-210ENST00000619785 RIC3Q7Z5B4 369 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms