RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 PTK2Q05397 1052 aa12.22□□□□□ -0.45
CBWD1-228ENST00000619157 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
CBWD1-228ENST00000619157 ARHGEF15O94989 841 aa12.21□□□□□ -0.45
CBWD1-228ENST00000619157 GPAT2Q6NUI2 795 aa12.21□□□□□ -0.45
CBWD1-228ENST00000619157 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
CBWD1-228ENST00000619157 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.45
CBWD1-228ENST00000619157 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
CBWD1-228ENST00000619157 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
CBWD1-228ENST00000619157 AP1G2O75843 785 aa12.19□□□□□ -0.46
CBWD1-228ENST00000619157 ADAMTS2O95450 1211 aa12.19□□□□□ -0.46
CBWD1-228ENST00000619157 CUEDC1Q9NWM3 386 aaPredicted RBP12.19□□□□□ -0.46
CBWD1-228ENST00000619157 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
CBWD1-228ENST00000619157 ADH1AP07327 375 aa12.18□□□□□ -0.46
CBWD1-228ENST00000619157 ADD1P35611 737 aaKnown RBP12.18□□□□□ -0.46
CBWD1-228ENST00000619157 MARSP56192 900 aaKnown RBP12.18□□□□□ -0.46
CBWD1-228ENST00000619157 NBPF20Q3BBV1 942 aa12.18□□□□□ -0.46
CBWD1-228ENST00000619157 KDM6BO15054 1643 aa12.18□□□□□ -0.46
CBWD1-228ENST00000619157 ERVH48-1M5A8F1 160 aa12.17□□□□□ -0.46
CBWD1-228ENST00000619157 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
CBWD1-228ENST00000619157 LILRA1O75019 489 aa12.16□□□□□ -0.46
CBWD1-228ENST00000619157 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
CBWD1-228ENST00000619157 HMX1Q9NP08 348 aaPredicted RBP12.16□□□□□ -0.46
CBWD1-228ENST00000619157 CD109Q6YHK3 1445 aa12.16□□□□□ -0.46
CBWD1-228ENST00000619157 MAGI3Q5TCQ9 1506 aa12.16□□□□□ -0.46
CBWD1-228ENST00000619157 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
CBWD1-228ENST00000619157 FMN1Q68DA7 1419 aa12.15□□□□□ -0.46
CBWD1-228ENST00000619157 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
CBWD1-228ENST00000619157 GPSM3Q9Y4H4 160 aa12.15□□□□□ -0.46
CBWD1-228ENST00000619157 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
CBWD1-228ENST00000619157 ABCA9Q8IUA7 1624 aa12.15□□□□□ -0.47
CBWD1-228ENST00000619157 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
CBWD1-228ENST00000619157 PTGIRP43119 386 aa12.14□□□□□ -0.47
CBWD1-228ENST00000619157 GAS6Q14393 721 aa12.14□□□□□ -0.47
CBWD1-228ENST00000619157 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
CBWD1-228ENST00000619157 RHOQP17081 205 aa12.13□□□□□ -0.47
CBWD1-228ENST00000619157 SH3D19Q5HYK7 790 aa12.13□□□□□ -0.47
CBWD1-228ENST00000619157 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
CBWD1-228ENST00000619157 GPBP1L1Q9HC44 474 aaPredicted RBP12.13□□□□□ -0.47
CBWD1-228ENST00000619157 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
CBWD1-228ENST00000619157 PCF11O94913 1555 aaKnown RBP12.13□□□□□ -0.47
CBWD1-228ENST00000619157 CLIP1P30622 1438 aa12.12□□□□□ -0.47
CBWD1-228ENST00000619157 HECW1Q76N89 1606 aa12.12□□□□□ -0.47
CBWD1-228ENST00000619157 PPP2R2DQ66LE6 453 aa12.12□□□□□ -0.47
CBWD1-228ENST00000619157 LYSMD3Q7Z3D4 306 aa12.12□□□□□ -0.47
CBWD1-228ENST00000619157 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
CBWD1-228ENST00000619157 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
CBWD1-228ENST00000619157 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
CBWD1-228ENST00000619157 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
CBWD1-228ENST00000619157 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
CBWD1-228ENST00000619157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.47
CBWD1-228ENST00000619157 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
CBWD1-228ENST00000619157 TTC37Q6PGP7 1564 aa12.09□□□□□ -0.47
CBWD1-228ENST00000619157 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
CBWD1-228ENST00000619157 GPR25O00155 361 aa12.09□□□□□ -0.47
CBWD1-228ENST00000619157 CELA2BP08218 269 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-228ENST00000619157 SRSF11Q05519 484 aaKnown RBP12.09□□□□□ -0.47
CBWD1-228ENST00000619157 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
CBWD1-228ENST00000619157 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-228ENST00000619157 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
CBWD1-228ENST00000619157 ESPNB1AK53 854 aa12.07□□□□□ -0.48
CBWD1-228ENST00000619157 CEP162Q5TB80 1403 aa12.07□□□□□ -0.48
CBWD1-228ENST00000619157 KDM4CQ9H3R0 1056 aa12.07□□□□□ -0.48
CBWD1-228ENST00000619157 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
CBWD1-228ENST00000619157 ZNF837Q96EG3 531 aaPredicted RBP12.06□□□□□ -0.48
CBWD1-228ENST00000619157 KIF14Q15058 1648 aa12.06□□□□□ -0.48
CBWD1-228ENST00000619157 FYCO1Q9BQS8 1478 aa12.05□□□□□ -0.48
CBWD1-228ENST00000619157 ARAP3Q8WWN8 1544 aa12.05□□□□□ -0.48
CBWD1-228ENST00000619157 RIPOR1Q6ZS17 1223 aa12.04□□□□□ -0.48
CBWD1-228ENST00000619157 FRMPD1Q5SYB0 1578 aa12.04□□□□□ -0.48
CBWD1-228ENST00000619157 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
CBWD1-228ENST00000619157 NEO1Q92859 1461 aa12.03□□□□□ -0.48
CBWD1-228ENST00000619157 MEN1O00255 615 aa12.03□□□□□ -0.48
CBWD1-228ENST00000619157 IGHA1P01876 353 aa12.03□□□□□ -0.48
CBWD1-228ENST00000619157 RNF144AP50876 292 aaPredicted RBP12.03□□□□□ -0.48
CBWD1-228ENST00000619157 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
CBWD1-228ENST00000619157 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.49
CBWD1-228ENST00000619157 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
CBWD1-228ENST00000619157 TRIM22Q8IYM9 498 aa12.01□□□□□ -0.49
CBWD1-228ENST00000619157 MBIPQ9NS73 344 aa12.01□□□□□ -0.49
CBWD1-228ENST00000619157 CNTNAP5Q8WYK1 1306 aa12.01□□□□□ -0.49
CBWD1-228ENST00000619157 RAPGEF3O95398 923 aa12□□□□□ -0.49
CBWD1-228ENST00000619157 FOXK2Q01167 660 aa12□□□□□ -0.49
CBWD1-228ENST00000619157 DBN1Q16643 649 aa12□□□□□ -0.49
CBWD1-228ENST00000619157 PCDHB9Q9Y5E1 797 aa12□□□□□ -0.49
CBWD1-228ENST00000619157 PLCH2O75038 1416 aa12□□□□□ -0.49
CBWD1-228ENST00000619157 FANCAO15360 1455 aa12□□□□□ -0.49
CBWD1-228ENST00000619157 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
CBWD1-228ENST00000619157 GTPBP3Q969Y2 492 aaKnown RBP11.99□□□□□ -0.49
CBWD1-228ENST00000619157 GAS2L1Q99501 681 aaPredicted RBP11.99□□□□□ -0.49
CBWD1-228ENST00000619157 ENAMQ9NRM1 1142 aa11.99□□□□□ -0.49
CBWD1-228ENST00000619157 AKNAQ7Z591 1439 aa11.99□□□□□ -0.49
CBWD1-228ENST00000619157 PHLDB1Q86UU1 1377 aa11.98□□□□□ -0.49
CBWD1-228ENST00000619157 RFC5P40937 340 aa11.98□□□□□ -0.49
CBWD1-228ENST00000619157 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
CBWD1-228ENST00000619157 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
CBWD1-228ENST00000619157 POU4F2Q12837 409 aa11.97□□□□□ -0.49
CBWD1-228ENST00000619157 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
CBWD1-228ENST00000619157 A0A1W2PRU2 124 aa11.96□□□□□ -0.49
CBWD1-228ENST00000619157 PLA2G4EQ3MJ16 856 aa11.96□□□□□ -0.49
CBWD1-228ENST00000619157 NEDD1Q8NHV4 660 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms