RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 FILIP1LQ4L180 1135 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 RUFY3Q7L099 469 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 MIPOL1Q8TD10 442 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 BIN1O00499 593 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 TRDNQ13061 729 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 CC2D2BQ6DHV5 1058 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 BSDC1Q9NW68 430 aaPredicted RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 KLHDC4Q8TBB5 520 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 A0A1B0GUA9 196 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 SNRKQ9NRH2 765 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 OLFM4Q6UX06 510 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 CGNL1Q0VF96 1302 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 HSP90AB3PQ58FF7 597 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 RUFY1Q96T51 708 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 RAB3GAP1Q15042 981 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 CCDC186Q7Z3E2 898 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 DDIT3P35638 169 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 GNL2Q13823 731 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 TICAM2Q86XR7 235 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 IL17REQ8NFR9 667 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 CPSF2Q9P2I0 782 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 RRBP1Q9P2E9 1410 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 CCDC196A0A1B0GTZ2 297 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 GJB4Q9NTQ9 266 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 DCTPP1Q9H773 170 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 TMCO3Q6UWJ1 677 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 SMIM5Q71RC9 77 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 SUDS3Q9H7L9 328 aaPredicted RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 MRVI1Q9Y6F6 885 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 PDILTQ8N807 584 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 CHST3Q7LGC8 479 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 SARNPP82979 210 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 ATP8B2P98198 1209 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 CYB5RLQ6IPT4 315 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 SAMD1Q6SPF0 538 aaPredicted RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 C14orf93Q9H972 538 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 POLE3Q9NRF9 147 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 KIF1CO43896 1103 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 LMNB2Q03252 620 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 K7ELQ4 463 aaPredicted RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 GIGYF2Q6Y7W6 1299 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 LRRN4CLQ8ND94 238 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 PTPN14Q15678 1187 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 ANO2Q9NQ90 1003 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 IBSPP21815 317 aaPredicted RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 SNX21Q969T3 373 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 CCDC85AQ96PX6 553 aaPredicted RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 BOLA2Q9H3K6 86 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 CHMLP26374 656 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 NFE2L2Q16236 605 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 USP25Q9UHP3 1055 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 ABCC5O15440 1437 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 MNAT1P51948 309 aa3.61□□□□□ -1.83
NEB-220ENST00000618972 PRPF40BQ6NWY9 871 aaKnown RBP3.61□□□□□ -1.83
NEB-220ENST00000618972 RBM26Q5T8P6 1007 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 CWC27Q6UX04 472 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 SPAG9O60271 1321 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 PNMA6EA0A0J9YXQ4 647 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 PRAMEF22A3QJZ6 481 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 ZNF397Q8NF99 534 aaPredicted RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 NCOA1Q15788 1441 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 ATP8B1O43520 1251 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 ERCC3P19447 782 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 PDE1AP54750 535 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 CT47B1P0C2W7 299 aaPredicted RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 MRPS25P82663 173 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 CCDC129Q6ZRS4 1044 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 U2AF2P26368 475 aaKnown RBP eCLIP3.6□□□□□ -1.83
NEB-220ENST00000618972 PIP4K2BP78356 416 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 MEX3CQ5U5Q3 659 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 EZRP15311 586 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 FMNL3Q8IVF7 1028 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 TMED1Q13445 227 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 MAP9Q49MG5 647 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 ANKRD18BA2A2Z9 1011 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 CCT2P78371 535 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 SIL1Q9H173 461 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 RABEP2Q9H5N1 569 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 EBAG9O00559 213 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 ZSCAN31Q96LW9 406 aaPredicted RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 FAM170AA1A519 330 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 PPP1R9BQ96SB3 815 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 HSP90AB4PQ58FF6 505 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 UIMC1Q96RL1 719 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 FTOQ9C0B1 505 aaKnown RBP eCLIP3.6□□□□□ -1.83
NEB-220ENST00000618972 TWISTNBQ3B726 338 aaPredicted RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 H3BQV1 296 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 RIOK3O14730 519 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 CDC45O75419 566 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 IFFO2Q5TF58 517 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 PHAXQ9H814 394 aaKnown RBP3.6□□□□□ -1.83
NEB-220ENST00000618972 YY1AP1Q9H869 796 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 CCDC114Q96M63 670 aa3.6□□□□□ -1.83
NEB-220ENST00000618972 DNM1Q05193 864 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 CCAR2Q8N163 923 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 SEC62Q99442 399 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 CLASRPQ8N2M8 674 aaKnown RBP3.59□□□□□ -1.83
NEB-220ENST00000618972 JAK2O60674 1132 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms