RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 LINC00114Q6XXX2 140 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 PSMG3-AS1Q96PY0 264 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 OSBPL3Q9H4L5 887 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 ARHGEF10LQ9HCE6 1279 aa7.63□□□□□ -1.19
TARDBP-220ENST00000618606 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
TARDBP-220ENST00000618606 UBAP2LQ14157 1087 aaKnown RBP7.62□□□□□ -1.19
TARDBP-220ENST00000618606 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
TARDBP-220ENST00000618606 PIK3R2O00459 728 aa7.61□□□□□ -1.19
TARDBP-220ENST00000618606 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
TARDBP-220ENST00000618606 GOPCQ9HD26 462 aa7.61□□□□□ -1.19
TARDBP-220ENST00000618606 GNRH1P01148 92 aa7.6□□□□□ -1.19
TARDBP-220ENST00000618606 GRIN2CQ14957 1233 aa7.6□□□□□ -1.19
TARDBP-220ENST00000618606 SUV39H2Q9H5I1 410 aa7.6□□□□□ -1.19
TARDBP-220ENST00000618606 GPAMQ9HCL2 828 aa7.6□□□□□ -1.19
TARDBP-220ENST00000618606 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.19
TARDBP-220ENST00000618606 C1QTNF9BB2RNN3 333 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 GNB5O14775 395 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 CENPCQ03188 943 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 SLCO4C1Q6ZQN7 724 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 ZNF592Q92610 1267 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 CNKSR1Q969H4 720 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 KRTAP9-2Q9BYQ4 174 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 ATXN7L1Q9ULK2 861 aaPredicted RBP7.59□□□□□ -1.19
TARDBP-220ENST00000618606 PCDHB11Q9Y5F2 797 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 HRH3Q9Y5N1 445 aa7.59□□□□□ -1.19
TARDBP-220ENST00000618606 IL2RAP01589 272 aa7.58□□□□□ -1.2
TARDBP-220ENST00000618606 TMEM259Q4ZIN3 620 aa7.58□□□□□ -1.2
TARDBP-220ENST00000618606 CD163Q86VB7 1156 aa7.58□□□□□ -1.2
TARDBP-220ENST00000618606 ESF1Q9H501 851 aaKnown RBP7.58□□□□□ -1.2
TARDBP-220ENST00000618606 C2CD2LO14523 706 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 BMP4P12644 408 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 AMPD1P23109 780 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 PHKA2P46019 1235 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-220ENST00000618606 ZSCAN10Q96SZ4 725 aaPredicted RBP7.57□□□□□ -1.2
TARDBP-220ENST00000618606 RAB6BQ9NRW1 208 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 NDFIP2Q9NV92 336 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 GGA1Q9UJY5 639 aa7.57□□□□□ -1.2
TARDBP-220ENST00000618606 CSB-PGBD3P0DP91 1061 aa7.56□□□□□ -1.2
TARDBP-220ENST00000618606 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
TARDBP-220ENST00000618606 BTBD6Q96KE9 485 aa7.56□□□□□ -1.2
TARDBP-220ENST00000618606 EPXP11678 715 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 FGFR3P22607 806 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 ITGB7P26010 798 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 NR1H3Q13133 447 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 EFHC2Q5JST6 749 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 GNASQ5JWF2 1037 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 FHDC1Q9C0D6 1143 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-220ENST00000618606 RUBCNLQ9H714 662 aa7.55□□□□□ -1.2
TARDBP-220ENST00000618606 NOP53Q9NZM5 478 aaKnown RBP7.55□□□□□ -1.2
TARDBP-220ENST00000618606 KRTAP9-6A0A140TA67 174 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 BNIP3LO60238 219 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 MSX1P28360 303 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 CHRNA4P43681 627 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 DGKGP49619 791 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 CTBSQ01459 385 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 C4orf17Q53FE4 359 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 ABHD17AQ96GS6 310 aa7.54□□□□□ -1.2
TARDBP-220ENST00000618606 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-220ENST00000618606 SLC24A1O60721 1099 aa7.53□□□□□ -1.2
TARDBP-220ENST00000618606 ARAFP10398 606 aa7.53□□□□□ -1.2
TARDBP-220ENST00000618606 GTF2E1P29083 439 aaPredicted RBP7.53□□□□□ -1.2
TARDBP-220ENST00000618606 TMEM214Q6NUQ4 689 aaKnown RBP7.53□□□□□ -1.2
TARDBP-220ENST00000618606 PCMTD1Q96MG8 357 aaPredicted RBP7.53□□□□□ -1.2
TARDBP-220ENST00000618606 CRISPLD1Q9H336 500 aa7.53□□□□□ -1.2
TARDBP-220ENST00000618606 RNF135Q8IUD6 432 aa7.52□□□□□ -1.21
TARDBP-220ENST00000618606 MYCP01106 439 aaPredicted RBP7.51□□□□□ -1.21
TARDBP-220ENST00000618606 RHBDD1Q8TEB9 315 aa7.51□□□□□ -1.21
TARDBP-220ENST00000618606 ESCO1Q5FWF5 840 aa7.5□□□□□ -1.21
TARDBP-220ENST00000618606 FIGNL1Q6PIW4 674 aa7.5□□□□□ -1.21
TARDBP-220ENST00000618606 IL27Q8NEV9 243 aa7.5□□□□□ -1.21
TARDBP-220ENST00000618606 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
TARDBP-220ENST00000618606 NEURL1BA8MQ27 555 aa7.49□□□□□ -1.21
TARDBP-220ENST00000618606 DOC2BQ14184 412 aa7.49□□□□□ -1.21
TARDBP-220ENST00000618606 PPARGC1BQ86YN6 1023 aaKnown RBP7.49□□□□□ -1.21
TARDBP-220ENST00000618606 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
TARDBP-220ENST00000618606 ZMYM1Q5SVZ6 1142 aa7.48□□□□□ -1.21
TARDBP-220ENST00000618606 CHSY3Q70JA7 882 aa7.48□□□□□ -1.21
TARDBP-220ENST00000618606 CCDC85AQ96PX6 553 aaPredicted RBP7.48□□□□□ -1.21
TARDBP-220ENST00000618606 CDCA7Q9BWT1 371 aaPredicted RBP7.48□□□□□ -1.21
TARDBP-220ENST00000618606 DNAAF2Q9NVR5 837 aaKnown RBP7.48□□□□□ -1.21
TARDBP-220ENST00000618606 PCDHGC4Q9Y5F7 938 aa7.48□□□□□ -1.21
TARDBP-220ENST00000618606 GPR37L1O60883 481 aa7.47□□□□□ -1.21
TARDBP-220ENST00000618606 GATA4P43694 442 aa7.47□□□□□ -1.21
TARDBP-220ENST00000618606 ZCCHC2Q9C0B9 1178 aaKnown RBP7.47□□□□□ -1.21
TARDBP-220ENST00000618606 AVENQ9NQS1 362 aaPredicted RBP7.47□□□□□ -1.21
TARDBP-220ENST00000618606 SOCS7O14512 581 aa7.46□□□□□ -1.22
TARDBP-220ENST00000618606 ADH6P28332 368 aa7.46□□□□□ -1.22
TARDBP-220ENST00000618606 FAM182BQ5T319 152 aa7.46□□□□□ -1.22
TARDBP-220ENST00000618606 NLRP8Q86W28 1048 aa7.46□□□□□ -1.22
TARDBP-220ENST00000618606 C1orf216Q8TAB5 229 aa7.46□□□□□ -1.22
TARDBP-220ENST00000618606 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
TARDBP-220ENST00000618606 BRPF1P55201 1214 aaPredicted RBP7.45□□□□□ -1.22
TARDBP-220ENST00000618606 TBC1D9Q6ZT07 1266 aa7.45□□□□□ -1.22
TARDBP-220ENST00000618606 KLF15Q9UIH9 416 aa7.45□□□□□ -1.22
TARDBP-220ENST00000618606 SPATA31C1P0DKV0 1188 aa7.44□□□□□ -1.22
TARDBP-220ENST00000618606 TLR1Q15399 786 aa7.44□□□□□ -1.22
TARDBP-220ENST00000618606 FCHSD1Q86WN1 690 aa7.44□□□□□ -1.22
TARDBP-220ENST00000618606 BANK1Q8NDB2 785 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms