RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 NOC3LQ8WTT2 800 aaKnown RBP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 CARD10Q9BWT7 1032 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 ANO2Q9NQ90 1003 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 TARBP1Q13395 1621 aaKnown RBP8.7□□□□□ -1.02
PDE6A-205ENST00000617647 AP1ARQ63HQ0 302 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 PIK3R5Q8WYR1 880 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 SMARCE1Q969G3 411 aa8.7□□□□□ -1.02
PDE6A-205ENST00000617647 PTPRKQ15262 1439 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 CCDC196A0A1B0GTZ2 297 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-205ENST00000617647 CLSTN1O94985 981 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 MCM2P49736 904 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
PDE6A-205ENST00000617647 POLKQ9UBT6 870 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 PHACTR2O75167 634 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 NOP2P46087 812 aaKnown RBP8.69□□□□□ -1.02
PDE6A-205ENST00000617647 MMS22LQ6ZRQ5 1243 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 MORC1Q86VD1 984 aa8.69□□□□□ -1.02
PDE6A-205ENST00000617647 ERLIN1O75477 346 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 ERLIN2O94905 339 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 EGFL6Q8IUX8 553 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 FBXO18Q8NFZ0 1043 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 ADAMTS12P58397 1594 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 PNMA6AP0CW24 399 aaPredicted RBP8.68□□□□□ -1.02
PDE6A-205ENST00000617647 FAM200AQ8TCP9 573 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 ZCCHC17Q9NP64 241 aaKnown RBP8.68□□□□□ -1.02
PDE6A-205ENST00000617647 EPRSP07814 1512 aaKnown RBP8.68□□□□□ -1.02
PDE6A-205ENST00000617647 ACTN2P35609 894 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 LUZP1Q86V48 1076 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 RILPL2Q969X0 211 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
PDE6A-205ENST00000617647 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 CNPY2Q9Y2B0 182 aa8.68□□□□□ -1.02
PDE6A-205ENST00000617647 KDM6BO15054 1643 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 SMARCA5O60264 1052 aaPredicted RBP8.67□□□□□ -1.02
PDE6A-205ENST00000617647 CEP57Q86XR8 500 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 FMNL3Q8IVF7 1028 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 DNAI1Q9UI46 699 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 U3KPZ7 1027 aaPredicted RBP8.67□□□□□ -1.02
PDE6A-205ENST00000617647 TCOF1Q13428 1488 aaKnown RBP8.67□□□□□ -1.02
PDE6A-205ENST00000617647 EIF3CLB5ME19 914 aaKnown RBP8.67□□□□□ -1.02
PDE6A-205ENST00000617647 NEMFO60524 1076 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 UBE2HP62256 183 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 ST5P78524 1137 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 NAA25Q14CX7 972 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 EIF3CQ99613 913 aaKnown RBP8.67□□□□□ -1.02
PDE6A-205ENST00000617647 MRC2Q9UBG0 1479 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 LIG3P49916 1009 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 CLCN6P51797 869 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
PDE6A-205ENST00000617647 ERCC4Q92889 916 aaPredicted RBP8.67□□□□□ -1.02
PDE6A-205ENST00000617647 SEC31AO94979 1220 aaKnown RBP8.66□□□□□ -1.02
PDE6A-205ENST00000617647 ZSWIM4Q9H7M6 989 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 LCMT1Q9UIC8 334 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 SHTN1A0MZ66 631 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 CCP110O43303 1012 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 GBP2P32456 591 aaPredicted RBP8.66□□□□□ -1.02
PDE6A-205ENST00000617647 ZSCAN25Q6NSZ9 544 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 WDR63Q8IWG1 891 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 GCC1Q96CN9 775 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 TMX3Q96JJ7 454 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 IRAK4Q9NWZ3 460 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
PDE6A-205ENST00000617647 CDK13Q14004 1512 aaKnown RBP8.66□□□□□ -1.02
PDE6A-205ENST00000617647 CLNS1AP54105 237 aaKnown RBP8.66□□□□□ -1.02
PDE6A-205ENST00000617647 MUM1L1Q5H9M0 696 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 ISM2Q6H9L7 571 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 TCP11L2Q8N4U5 519 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 ANKRD36BQ8N2N9 1353 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 PARD3Q8TEW0 1356 aa8.66□□□□□ -1.02
PDE6A-205ENST00000617647 GCKP35557 465 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 ZNF165P49910 485 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 NBPF11Q86T75 865 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 JPH2Q9BR39 696 aaPredicted RBP8.65□□□□□ -1.02
PDE6A-205ENST00000617647 A0A1B0GUA9 196 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 FRMD3A2A2Y4 597 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 ANO6Q4KMQ2 910 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 ERC1Q8IUD2 1116 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 TMEM57Q8N5G2 664 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 PRPF38AQ8NAV1 312 aaKnown RBP8.65□□□□□ -1.02
PDE6A-205ENST00000617647 PSMD1Q99460 953 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 UPF3BQ9BZI7 483 aaKnown RBP8.65□□□□□ -1.02
PDE6A-205ENST00000617647 SCAPERQ9BY12 1400 aa8.65□□□□□ -1.02
PDE6A-205ENST00000617647 CCDC69A6NI79 296 aa8.65□□□□□ -1.03
PDE6A-205ENST00000617647 SFPQP23246 707 aaKnown RBP eCLIP8.65□□□□□ -1.03
PDE6A-205ENST00000617647 PEX19P40855 299 aa8.65□□□□□ -1.03
PDE6A-205ENST00000617647 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.03
PDE6A-205ENST00000617647 TSR2Q969E8 191 aaKnown RBP8.65□□□□□ -1.03
PDE6A-205ENST00000617647 VEZTQ9HBM0 779 aa8.65□□□□□ -1.03
PDE6A-205ENST00000617647 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.03
PDE6A-205ENST00000617647 NRBP1Q9UHY1 535 aa8.65□□□□□ -1.03
PDE6A-205ENST00000617647 WDR62O43379 1518 aa8.65□□□□□ -1.03
PDE6A-205ENST00000617647 PPP1R12AO14974 1030 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-205ENST00000617647 ERC2O15083 957 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 EVCP57679 992 aa8.64□□□□□ -1.03
PDE6A-205ENST00000617647 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms