RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
PTPRT-210ENST00000617474 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
PTPRT-210ENST00000617474 TTC12Q9H892 705 aaPredicted RBP18.21■□□□□ 0.51
PTPRT-210ENST00000617474 ZBTB40Q9NUA8 1239 aa18.21■□□□□ 0.51
PTPRT-210ENST00000617474 KIF14Q15058 1648 aa18.21■□□□□ 0.51
PTPRT-210ENST00000617474 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
PTPRT-210ENST00000617474 GJB2P29033 226 aa18.21■□□□□ 0.5
PTPRT-210ENST00000617474 LRSAM1Q6UWE0 723 aa18.21■□□□□ 0.5
PTPRT-210ENST00000617474 CAGE1Q8TC20 777 aa18.21■□□□□ 0.5
PTPRT-210ENST00000617474 RAB3GAP1Q15042 981 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 TTC39AQ5SRH9 613 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 PTPN14Q15678 1187 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 SNX21Q969T3 373 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 RUFY1Q96T51 708 aa18.2■□□□□ 0.5
PTPRT-210ENST00000617474 JMYQ8N9B5 988 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 SCAND2PQ9GZW5 306 aaPredicted RBP18.19■□□□□ 0.5
PTPRT-210ENST00000617474 TNNT1P13805 278 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 PDE1AP54750 535 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 CFAP100Q494V2 611 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
PTPRT-210ENST00000617474 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
PTPRT-210ENST00000617474 CNNM1Q9NRU3 951 aa18.18■□□□□ 0.5
PTPRT-210ENST00000617474 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
PTPRT-210ENST00000617474 IL16Q14005 1332 aa18.18■□□□□ 0.5
PTPRT-210ENST00000617474 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
PTPRT-210ENST00000617474 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
PTPRT-210ENST00000617474 SETQ01105 290 aaPredicted RBP18.18■□□□□ 0.5
PTPRT-210ENST00000617474 KRT32Q14532 448 aa18.18■□□□□ 0.5
PTPRT-210ENST00000617474 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
PTPRT-210ENST00000617474 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
PTPRT-210ENST00000617474 NUP133Q8WUM0 1156 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
PTPRT-210ENST00000617474 ACBD3Q9H3P7 528 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 XBP1P17861 261 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 CCT2P78371 535 aaKnown RBP18.17■□□□□ 0.5
PTPRT-210ENST00000617474 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 UBXN4Q92575 508 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
PTPRT-210ENST00000617474 FILIP1LQ4L180 1135 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 PPP4R3BQ5MIZ7 849 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 ANKRD44Q8N8A2 993 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
PTPRT-210ENST00000617474 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
PTPRT-210ENST00000617474 ZNF165P49910 485 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 USP48Q86UV5 1035 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 BIN1O00499 593 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 VAMP4O75379 141 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
PTPRT-210ENST00000617474 SH2B1Q9NRF2 756 aaPredicted RBP18.16■□□□□ 0.5
PTPRT-210ENST00000617474 CEP126Q9P2H0 1117 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 POLR3AO14802 1390 aaPredicted RBP18.16■□□□□ 0.5
PTPRT-210ENST00000617474 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 DTNBO60941 627 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
PTPRT-210ENST00000617474 PTPRCP08575 1304 aa18.16■□□□□ 0.5
PTPRT-210ENST00000617474 PI4KAP2A4QPH2 592 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 PI4KAP1Q8N8J0 262 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 OTUD7AQ8TE49 926 aaPredicted RBP18.15■□□□□ 0.5
PTPRT-210ENST00000617474 ARHGAP45Q92619 1136 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 TRERF1Q96PN7 1200 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 BRMS1Q9HCU9 246 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 ZKSCAN5Q9Y2L8 839 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 ATF3P18847 181 aa18.15■□□□□ 0.5
PTPRT-210ENST00000617474 UBE2HP62256 183 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 AXDND1Q5T1B0 1012 aaPredicted RBP18.14■□□□□ 0.49
PTPRT-210ENST00000617474 PPFIBP1Q86W92 1011 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 AMOTL1Q8IY63 956 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 NOL10Q9BSC4 688 aaKnown RBP18.14■□□□□ 0.49
PTPRT-210ENST00000617474 PZPP20742 1482 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 CCP110O43303 1012 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 CABP4P57796 275 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 CCDC82Q8N4S0 544 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 JARID2Q92833 1246 aaPredicted RBP18.14■□□□□ 0.49
PTPRT-210ENST00000617474 ECHDC1Q9NTX5 307 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 CCDC57Q2TAC2 916 aa18.14■□□□□ 0.49
PTPRT-210ENST00000617474 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
PTPRT-210ENST00000617474 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 STRN4Q9NRL3 753 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 OFD1O75665 1012 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 IDH1O75874 414 aaKnown RBP18.13■□□□□ 0.49
PTPRT-210ENST00000617474 URI1O94763 535 aaPredicted RBP18.13■□□□□ 0.49
PTPRT-210ENST00000617474 ISM2Q6H9L7 571 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 TEX14Q8IWB6 1497 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 PIBF1Q8WXW3 757 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 AK7Q96M32 723 aa18.13■□□□□ 0.49
PTPRT-210ENST00000617474 MCM5P33992 734 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPRT-210ENST00000617474 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
PTPRT-210ENST00000617474 TRIM22Q8IYM9 498 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 TMX1Q9H3N1 280 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 RAB11FIP4Q86YS3 637 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 POLKQ9UBT6 870 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 DYNC1I1O14576 645 aa18.12■□□□□ 0.49
PTPRT-210ENST00000617474 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms