RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 TIMMDC1Q9NPL8 285 aa8.64□□□□□ -1.03
CUL3-216ENST00000617432 AMPD1P23109 780 aa8.63□□□□□ -1.03
CUL3-216ENST00000617432 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
CUL3-216ENST00000617432 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
CUL3-216ENST00000617432 CHRNA4P43681 627 aa8.63□□□□□ -1.03
CUL3-216ENST00000617432 DOC2BQ14184 412 aa8.63□□□□□ -1.03
CUL3-216ENST00000617432 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
CUL3-216ENST00000617432 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
CUL3-216ENST00000617432 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
CUL3-216ENST00000617432 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
CUL3-216ENST00000617432 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
CUL3-216ENST00000617432 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
CUL3-216ENST00000617432 AK7Q96M32 723 aa8.6□□□□□ -1.03
CUL3-216ENST00000617432 RSF1Q96T23 1441 aaPredicted RBP8.6□□□□□ -1.03
CUL3-216ENST00000617432 ERCC6Q03468 1493 aa8.59□□□□□ -1.03
CUL3-216ENST00000617432 SCO2A0A1W2PP80 73 aa8.59□□□□□ -1.03
CUL3-216ENST00000617432 WASLO00401 505 aaPredicted RBP8.59□□□□□ -1.03
CUL3-216ENST00000617432 THBS1P07996 1170 aa8.59□□□□□ -1.03
CUL3-216ENST00000617432 CCDC125Q86Z20 511 aa8.59□□□□□ -1.03
CUL3-216ENST00000617432 BTBD6Q96KE9 485 aa8.59□□□□□ -1.03
CUL3-216ENST00000617432 CLN3Q13286 438 aa8.58□□□□□ -1.04
CUL3-216ENST00000617432 KRTAP9-9Q9BYP9 154 aa8.58□□□□□ -1.04
CUL3-216ENST00000617432 KRTAP9-4Q9BYQ2 154 aa8.58□□□□□ -1.04
CUL3-216ENST00000617432 POLR3EQ9NVU0 708 aa8.58□□□□□ -1.04
CUL3-216ENST00000617432 GATA4P43694 442 aa8.57□□□□□ -1.04
CUL3-216ENST00000617432 LBRQ14739 615 aaKnown RBP8.57□□□□□ -1.04
CUL3-216ENST00000617432 BMP4P12644 408 aa8.56□□□□□ -1.04
CUL3-216ENST00000617432 GGA1Q9UJY5 639 aa8.56□□□□□ -1.04
CUL3-216ENST00000617432 KIF21AQ7Z4S6 1674 aa8.55□□□□□ -1.04
CUL3-216ENST00000617432 EPXP11678 715 aa8.55□□□□□ -1.04
CUL3-216ENST00000617432 DGKGP49619 791 aa8.55□□□□□ -1.04
CUL3-216ENST00000617432 CC2D2BQ6DHV5 1058 aa8.55□□□□□ -1.04
CUL3-216ENST00000617432 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
CUL3-216ENST00000617432 THOC2Q8NI27 1593 aaKnown RBP8.55□□□□□ -1.04
CUL3-216ENST00000617432 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 UBAP2LQ14157 1087 aaKnown RBP8.54□□□□□ -1.04
CUL3-216ENST00000617432 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 ZFP64Q9NPA5 681 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 LAMC3Q9Y6N6 1575 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 C2CD2LO14523 706 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
CUL3-216ENST00000617432 ARTNQ5T4W7 220 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
CUL3-216ENST00000617432 GPAMQ9HCL2 828 aa8.54□□□□□ -1.04
CUL3-216ENST00000617432 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
CUL3-216ENST00000617432 RSPO4Q2I0M5 234 aaPredicted RBP8.53□□□□□ -1.04
CUL3-216ENST00000617432 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
CUL3-216ENST00000617432 GIGYF1O75420 1035 aaPredicted RBP8.52□□□□□ -1.05
CUL3-216ENST00000617432 PDE4DQ08499 809 aa8.52□□□□□ -1.05
CUL3-216ENST00000617432 CSB-PGBD3P0DP91 1061 aa8.51□□□□□ -1.05
CUL3-216ENST00000617432 PGBD3Q8N328 593 aa8.51□□□□□ -1.05
CUL3-216ENST00000617432 EPS8L1Q8TE68 723 aa8.51□□□□□ -1.05
CUL3-216ENST00000617432 CUX2O14529 1486 aa8.51□□□□□ -1.05
CUL3-216ENST00000617432 ARAFP10398 606 aa8.5□□□□□ -1.05
CUL3-216ENST00000617432 FGFR3P22607 806 aa8.5□□□□□ -1.05
CUL3-216ENST00000617432 NKAPLQ5M9Q1 402 aa8.5□□□□□ -1.05
CUL3-216ENST00000617432 NBPF11Q86T75 865 aa8.5□□□□□ -1.05
CUL3-216ENST00000617432 RNF135Q8IUD6 432 aa8.5□□□□□ -1.05
CUL3-216ENST00000617432 CADPSQ9ULU8 1353 aa8.5□□□□□ -1.05
CUL3-216ENST00000617432 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
CUL3-216ENST00000617432 CTBSQ01459 385 aa8.49□□□□□ -1.05
CUL3-216ENST00000617432 EFHC2Q5JST6 749 aa8.48□□□□□ -1.05
CUL3-216ENST00000617432 RNF20Q5VTR2 975 aa8.48□□□□□ -1.05
CUL3-216ENST00000617432 ABHD17AQ96GS6 310 aa8.48□□□□□ -1.05
CUL3-216ENST00000617432 ARHGEF10LQ9HCE6 1279 aa8.48□□□□□ -1.05
CUL3-216ENST00000617432 NDFIP2Q9NV92 336 aa8.48□□□□□ -1.05
CUL3-216ENST00000617432 AP1G2O75843 785 aa8.47□□□□□ -1.05
CUL3-216ENST00000617432 SPATA31C1P0DKV0 1188 aa8.47□□□□□ -1.05
CUL3-216ENST00000617432 CHSY3Q70JA7 882 aa8.47□□□□□ -1.05
CUL3-216ENST00000617432 KRTAP19-1Q8IUB9 90 aa8.47□□□□□ -1.05
CUL3-216ENST00000617432 NEURL1BA8MQ27 555 aa8.46□□□□□ -1.05
CUL3-216ENST00000617432 TRAK2O60296 914 aa8.46□□□□□ -1.05
CUL3-216ENST00000617432 PHKA2P46019 1235 aa8.46□□□□□ -1.05
CUL3-216ENST00000617432 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.05
CUL3-216ENST00000617432 RUBCNLQ9H714 662 aa8.46□□□□□ -1.05
CUL3-216ENST00000617432 GOLGA2P5Q9HBQ8 144 aa8.46□□□□□ -1.05
CUL3-216ENST00000617432 BNIP3LO60238 219 aa8.46□□□□□ -1.06
CUL3-216ENST00000617432 CENPCQ03188 943 aa8.46□□□□□ -1.06
CUL3-216ENST00000617432 FBXO31Q5XUX0 539 aaPredicted RBP8.46□□□□□ -1.06
CUL3-216ENST00000617432 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.06
CUL3-216ENST00000617432 PCDHB9Q9Y5E1 797 aa8.46□□□□□ -1.06
CUL3-216ENST00000617432 PDS5BQ9NTI5 1447 aa8.45□□□□□ -1.06
CUL3-216ENST00000617432 DYRK3O43781 588 aa8.45□□□□□ -1.06
CUL3-216ENST00000617432 MSX1P28360 303 aa8.45□□□□□ -1.06
CUL3-216ENST00000617432 SKIV2LQ15477 1246 aaKnown RBP8.45□□□□□ -1.06
CUL3-216ENST00000617432 OSBPL3Q9H4L5 887 aa8.45□□□□□ -1.06
CUL3-216ENST00000617432 HMX1Q9NP08 348 aaPredicted RBP8.45□□□□□ -1.06
CUL3-216ENST00000617432 CCDC88BA6NC98 1476 aa8.45□□□□□ -1.06
CUL3-216ENST00000617432 CFTRP13569 1480 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 GNRH1P01148 92 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 SCTRP47872 440 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 CNKSR1Q969H4 720 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 TRIM11Q96F44 468 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
CUL3-216ENST00000617432 PLVAPQ9BX97 442 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 TPSG1Q9NRR2 321 aa8.44□□□□□ -1.06
CUL3-216ENST00000617432 FANCD2Q9BXW9 1451 aa8.43□□□□□ -1.06
CUL3-216ENST00000617432 MRC2Q9UBG0 1479 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms