RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ARAP3Q8WWN8 1544 aa11.63□□□□□ -0.55
TNFRSF9-204ENST00000615230 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 EYA3Q99504 573 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 PDCP20941 246 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 MYD88Q99836 296 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 RTCBQ9Y3I0 505 aaKnown RBP11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 PRM3Q9NNZ6 103 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 NUCB2P80303 420 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 MAP3K12Q12852 859 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 NBPF5PQ86XG9 351 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 PLEKHG1Q9ULL1 1385 aa11.62□□□□□ -0.55
TNFRSF9-204ENST00000615230 ZNF396Q96N95 335 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 EFCAB6Q5THR3 1501 aa11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 PRAG1Q86YV5 1406 aa11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 IPO7O95373 1038 aaKnown RBP11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 USP5P45974 858 aa11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 TDO2P48775 406 aa11.61□□□□□ -0.55
TNFRSF9-204ENST00000615230 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 BAG3O95817 575 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 AACSQ86V21 672 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 CREBRFQ8IUR6 639 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 AIDAQ96BJ3 306 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 CCDC70Q6NSX1 233 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 UBAC1Q9BSL1 405 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 UQCRFS1P1P0C7P4 283 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 CCDC73Q6ZRK6 1079 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 HLA-DOAP06340 250 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 KIF1BPQ96EK5 621 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 DCAF5Q96JK2 942 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 PES1O00541 588 aaKnown RBP11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 RNF41Q9H4P4 317 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF9-204ENST00000615230 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 MVPQ14764 893 aaKnown RBP11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 EXOC6Q8TAG9 804 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 BECN2A8MW95 431 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 BABAM1Q9NWV8 329 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 EDC4Q6P2E9 1401 aaKnown RBP11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 SUPT20HQ8NEM7 779 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 PREX2Q70Z35 1606 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
TNFRSF9-204ENST00000615230 EPS15P42566 896 aa11.58□□□□□ -0.55
TNFRSF9-204ENST00000615230 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.55
TNFRSF9-204ENST00000615230 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.55
TNFRSF9-204ENST00000615230 ZNF804AQ7Z570 1209 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 USHBP1Q8N6Y0 703 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 RDXP35241 583 aaKnown RBP11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 ANKRD2Q9GZV1 360 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 TFCP2L1Q9NZI6 479 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 COL17A1Q9UMD9 1497 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 IP6K1Q92551 441 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 CUL5Q93034 780 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 CABP5Q9NP86 173 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
TNFRSF9-204ENST00000615230 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 USP21Q9UK80 565 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 RRP12Q5JTH9 1297 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 TPTE2Q6XPS3 522 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 SLAIN2Q9P270 581 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 SEC63Q9UGP8 760 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 LETM1O95202 739 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 ZSCAN31Q96LW9 406 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
TNFRSF9-204ENST00000615230 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 CHRNA2Q15822 529 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 TRAPPC3LQ5T215 181 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 CYP46A1Q9Y6A2 500 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 SAMD9LQ8IVG5 1584 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 ANKRD18AQ8IVF6 992 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 LNPKQ9C0E8 428 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 SIL1Q9H173 461 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 B4DLN1 442 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 MRPL12P52815 198 aaKnown RBP11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 TSR2Q969E8 191 aaKnown RBP11.56□□□□□ -0.56
TNFRSF9-204ENST00000615230 CCDC87Q9NVE4 849 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms