RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 CDC45O75419 566 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 RPAP2Q8IXW5 612 aaPredicted RBP11.32□□□□□ -0.6
MSRB3-212ENST00000614640 ANKRD24Q8TF21 1146 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 GNAT3A8MTJ3 354 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 EVA1CP58658 441 aa11.32□□□□□ -0.6
MSRB3-212ENST00000614640 FAM208AQ9UK61 1670 aaKnown RBP11.31□□□□□ -0.6
MSRB3-212ENST00000614640 TEFQ10587 303 aa11.31□□□□□ -0.6
MSRB3-212ENST00000614640 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
MSRB3-212ENST00000614640 TSPYL4Q9UJ04 414 aa11.31□□□□□ -0.6
MSRB3-212ENST00000614640 MST1RQ04912 1400 aa11.31□□□□□ -0.6
MSRB3-212ENST00000614640 TATP17735 454 aaPredicted RBP11.31□□□□□ -0.6
MSRB3-212ENST00000614640 SMARCA5O60264 1052 aaPredicted RBP11.3□□□□□ -0.6
MSRB3-212ENST00000614640 BRINP3Q76B58 766 aa11.3□□□□□ -0.6
MSRB3-212ENST00000614640 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
MSRB3-212ENST00000614640 F6X3S4 739 aa11.3□□□□□ -0.6
MSRB3-212ENST00000614640 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 ZNF530Q6P9A1 599 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-212ENST00000614640 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
MSRB3-212ENST00000614640 STK31Q9BXU1 1019 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 TRAK2O60296 914 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
MSRB3-212ENST00000614640 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
MSRB3-212ENST00000614640 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
MSRB3-212ENST00000614640 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
MSRB3-212ENST00000614640 SDSP20132 328 aa11.28□□□□□ -0.6
MSRB3-212ENST00000614640 TOM1O60784 492 aa11.28□□□□□ -0.6
MSRB3-212ENST00000614640 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
MSRB3-212ENST00000614640 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
MSRB3-212ENST00000614640 TNS3Q68CZ2 1445 aa11.28□□□□□ -0.6
MSRB3-212ENST00000614640 LRRC59Q96AG4 307 aaKnown RBP11.28□□□□□ -0.6
MSRB3-212ENST00000614640 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
MSRB3-212ENST00000614640 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
MSRB3-212ENST00000614640 GZF1Q9H116 711 aaPredicted RBP11.27□□□□□ -0.6
MSRB3-212ENST00000614640 APBB1O00213 710 aa11.27□□□□□ -0.61
MSRB3-212ENST00000614640 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 XRCC6P12956 609 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSRB3-212ENST00000614640 TOM1L2Q6ZVM7 507 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 IL17REQ8NFR9 667 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 LTN1O94822 1766 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 CCT4P50991 539 aaKnown RBP11.26□□□□□ -0.61
MSRB3-212ENST00000614640 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
MSRB3-212ENST00000614640 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
MSRB3-212ENST00000614640 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 MAP3K5Q99683 1374 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 SALL3Q9BXA9 1300 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 CHRNA2Q15822 529 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 L1TD1Q5T7N2 865 aaKnown RBP11.25□□□□□ -0.61
MSRB3-212ENST00000614640 OSBPL3Q9H4L5 887 aa11.25□□□□□ -0.61
MSRB3-212ENST00000614640 FLIIQ13045 1269 aa11.24□□□□□ -0.61
MSRB3-212ENST00000614640 AKAP4Q5JQC9 854 aa11.24□□□□□ -0.61
MSRB3-212ENST00000614640 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
MSRB3-212ENST00000614640 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 PNMA6EA0A0J9YXQ4 647 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 GOLGA6L3A6NEY3 463 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 PDE1AP54750 535 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 RABEP1Q15276 862 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 STRN4Q9NRL3 753 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 EXOC6BQ9Y2D4 811 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 GNAI2P04899 355 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 SSFA2P28290 1259 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 CCDC30Q5VVM6 783 aa11.23□□□□□ -0.61
MSRB3-212ENST00000614640 NFAT5O94916 1531 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 HMMRO75330 724 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 ARXQ96QS3 562 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
MSRB3-212ENST00000614640 PIP4K2BP78356 416 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 CLEC17AQ6ZS10 378 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
MSRB3-212ENST00000614640 RGPD2P0DJD1 1756 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 FAM43AQ8N2R8 423 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 ERBB3P21860 1342 aa11.22□□□□□ -0.61
MSRB3-212ENST00000614640 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.61
MSRB3-212ENST00000614640 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
MSRB3-212ENST00000614640 HSP90AA1P07900 732 aaKnown RBP11.21□□□□□ -0.61
MSRB3-212ENST00000614640 SOS1Q07889 1333 aaPredicted RBP11.21□□□□□ -0.61
MSRB3-212ENST00000614640 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
MSRB3-212ENST00000614640 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.62
MSRB3-212ENST00000614640 IFNL2Q8IZJ0 200 aa11.21□□□□□ -0.62
MSRB3-212ENST00000614640 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.62
MSRB3-212ENST00000614640 GBP4Q96PP9 640 aa11.21□□□□□ -0.62
MSRB3-212ENST00000614640 IBTKQ9P2D0 1353 aaPredicted RBP11.2□□□□□ -0.62
MSRB3-212ENST00000614640 KDM3BQ7LBC6 1761 aa11.2□□□□□ -0.62
MSRB3-212ENST00000614640 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
MSRB3-212ENST00000614640 ATP8B2P98198 1209 aa11.2□□□□□ -0.62
MSRB3-212ENST00000614640 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
MSRB3-212ENST00000614640 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
MSRB3-212ENST00000614640 CYP2E1P05181 493 aaPredicted RBP11.2□□□□□ -0.62
MSRB3-212ENST00000614640 GAS2L3Q86XJ1 694 aa11.2□□□□□ -0.62
MSRB3-212ENST00000614640 UBAP1LF5GYI3 381 aa11.19□□□□□ -0.62
MSRB3-212ENST00000614640 PHAXQ9H814 394 aaKnown RBP11.19□□□□□ -0.62
MSRB3-212ENST00000614640 ERC2O15083 957 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms