RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 MS4A1P11836 297 aa22.66■■□□□ 1.22
GEN1-208ENST00000614478 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
GEN1-208ENST00000614478 RAPGEF4Q8WZA2 1011 aa22.66■■□□□ 1.22
GEN1-208ENST00000614478 IPO8O15397 1037 aaKnown RBP22.65■■□□□ 1.22
GEN1-208ENST00000614478 TAF7Q15545 349 aaPredicted RBP22.65■■□□□ 1.22
GEN1-208ENST00000614478 ATF7IPQ6VMQ6 1270 aa22.65■■□□□ 1.22
GEN1-208ENST00000614478 DZIP1LQ8IYY4 767 aaKnown RBP22.65■■□□□ 1.22
GEN1-208ENST00000614478 MRPL50Q8N5N7 158 aaKnown RBP22.65■■□□□ 1.22
GEN1-208ENST00000614478 CEMIPQ8WUJ3 1361 aa22.65■■□□□ 1.22
GEN1-208ENST00000614478 TRIM27P14373 513 aa22.64■■□□□ 1.22
GEN1-208ENST00000614478 C1orf141Q5JVX7 400 aa22.64■■□□□ 1.22
GEN1-208ENST00000614478 LGR6Q9HBX8 967 aa22.64■■□□□ 1.22
GEN1-208ENST00000614478 BARGINQ6ZT62 677 aa22.64■■□□□ 1.21
GEN1-208ENST00000614478 FTSJ3Q8IY81 847 aaKnown RBP22.64■■□□□ 1.21
GEN1-208ENST00000614478 TATP17735 454 aaPredicted RBP22.63■■□□□ 1.21
GEN1-208ENST00000614478 RXRBP28702 533 aa22.63■■□□□ 1.21
GEN1-208ENST00000614478 BABAM1Q9NWV8 329 aa22.63■■□□□ 1.21
GEN1-208ENST00000614478 PARP4Q9UKK3 1724 aaKnown RBP22.63■■□□□ 1.21
GEN1-208ENST00000614478 TCERG1O14776 1098 aaKnown RBP22.62■■□□□ 1.21
GEN1-208ENST00000614478 THSD7AQ9UPZ6 1657 aa22.62■■□□□ 1.21
GEN1-208ENST00000614478 MPRIPQ6WCQ1 1025 aa22.62■■□□□ 1.21
GEN1-208ENST00000614478 MEGF6O75095 1541 aa22.6■■□□□ 1.21
GEN1-208ENST00000614478 ONECUT3O60422 494 aaPredicted RBP22.6■■□□□ 1.21
GEN1-208ENST00000614478 CDCA7Q9BWT1 371 aaPredicted RBP22.6■■□□□ 1.21
GEN1-208ENST00000614478 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
GEN1-208ENST00000614478 RNMTO43148 476 aaKnown RBP22.6■■□□□ 1.21
GEN1-208ENST00000614478 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
GEN1-208ENST00000614478 FAM98CQ17RN3 349 aaKnown RBP22.6■■□□□ 1.21
GEN1-208ENST00000614478 IL2RBP14784 551 aa22.58■■□□□ 1.21
GEN1-208ENST00000614478 ARHGAP45Q92619 1136 aa22.58■■□□□ 1.21
GEN1-208ENST00000614478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.58■■□□□ 1.21
GEN1-208ENST00000614478 SPG7Q9UQ90 795 aa22.58■■□□□ 1.21
GEN1-208ENST00000614478 TEFQ10587 303 aa22.58■■□□□ 1.2
GEN1-208ENST00000614478 VIRMAQ69YN4 1812 aaKnown RBP22.58■■□□□ 1.2
GEN1-208ENST00000614478 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
GEN1-208ENST00000614478 AAMPQ13685 434 aa22.57■■□□□ 1.2
GEN1-208ENST00000614478 BRWD3Q6RI45 1802 aa22.56■■□□□ 1.2
GEN1-208ENST00000614478 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
GEN1-208ENST00000614478 TMEM57Q8N5G2 664 aa22.55■■□□□ 1.2
GEN1-208ENST00000614478 PKD1L3Q7Z443 1732 aa22.55■■□□□ 1.2
GEN1-208ENST00000614478 ITPRIPQ8IWB1 547 aa22.54■■□□□ 1.2
GEN1-208ENST00000614478 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
GEN1-208ENST00000614478 A0A0G2JS52 829 aa22.54■■□□□ 1.2
GEN1-208ENST00000614478 PHKG2P15735 406 aa22.54■■□□□ 1.2
GEN1-208ENST00000614478 MYT1Q01538 1121 aa22.54■■□□□ 1.2
GEN1-208ENST00000614478 RGS12O14924 1447 aa22.53■■□□□ 1.2
GEN1-208ENST00000614478 BTBD11A6QL63 1104 aa22.53■■□□□ 1.2
GEN1-208ENST00000614478 SEPT12Q8IYM1 358 aa22.53■■□□□ 1.2
GEN1-208ENST00000614478 IFNL2Q8IZJ0 200 aa22.53■■□□□ 1.2
GEN1-208ENST00000614478 DDX19BQ9UMR2 479 aa22.53■■□□□ 1.2
GEN1-208ENST00000614478 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
GEN1-208ENST00000614478 KDM3BQ7LBC6 1761 aa22.52■■□□□ 1.2
GEN1-208ENST00000614478 SHANK3Q9BYB0 1731 aa22.52■■□□□ 1.2
GEN1-208ENST00000614478 SOS1Q07889 1333 aaPredicted RBP22.52■■□□□ 1.19
GEN1-208ENST00000614478 CENPQQ7L2Z9 268 aaPredicted RBP22.51■■□□□ 1.19
GEN1-208ENST00000614478 TNS2Q63HR2 1409 aa22.51■■□□□ 1.19
GEN1-208ENST00000614478 DDB1Q16531 1140 aa22.51■■□□□ 1.19
GEN1-208ENST00000614478 API5Q9BZZ5 524 aaKnown RBP22.51■■□□□ 1.19
GEN1-208ENST00000614478 CYP27B1O15528 508 aa22.49■■□□□ 1.19
GEN1-208ENST00000614478 SLC4A2P04920 1241 aa22.49■■□□□ 1.19
GEN1-208ENST00000614478 EIF4A1P60842 406 aaKnown RBP22.49■■□□□ 1.19
GEN1-208ENST00000614478 EXOC5O00471 708 aa22.49■■□□□ 1.19
GEN1-208ENST00000614478 KCNQ3O43525 872 aa22.49■■□□□ 1.19
GEN1-208ENST00000614478 SCN11AQ9UI33 1791 aa22.48■■□□□ 1.19
GEN1-208ENST00000614478 ABCC4O15439 1325 aa22.48■■□□□ 1.19
GEN1-208ENST00000614478 KDM6AO15550 1401 aaPredicted RBP22.48■■□□□ 1.19
GEN1-208ENST00000614478 CCDC30Q5VVM6 783 aa22.48■■□□□ 1.19
GEN1-208ENST00000614478 RBM19Q9Y4C8 960 aaKnown RBP22.48■■□□□ 1.19
GEN1-208ENST00000614478 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
GEN1-208ENST00000614478 ZCRB1Q8TBF4 217 aaKnown RBP22.47■■□□□ 1.19
GEN1-208ENST00000614478 PCDHB15Q9Y5E8 787 aa22.47■■□□□ 1.19
GEN1-208ENST00000614478 IGHDP01880 384 aa22.47■■□□□ 1.19
GEN1-208ENST00000614478 STK31Q9BXU1 1019 aa22.47■■□□□ 1.19
GEN1-208ENST00000614478 HSP90AB1P08238 724 aaKnown RBP22.46■■□□□ 1.19
GEN1-208ENST00000614478 DCAF5Q96JK2 942 aa22.46■■□□□ 1.19
GEN1-208ENST00000614478 EP400Q96L91 3159 aa22.46■■□□□ 1.19
GEN1-208ENST00000614478 PTPRCP08575 1304 aa22.46■■□□□ 1.19
GEN1-208ENST00000614478 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.19
GEN1-208ENST00000614478 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
GEN1-208ENST00000614478 KAT6BQ8WYB5 2073 aa22.45■■□□□ 1.18
GEN1-208ENST00000614478 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
GEN1-208ENST00000614478 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
GEN1-208ENST00000614478 HOXB7P09629 217 aa22.43■■□□□ 1.18
GEN1-208ENST00000614478 G2E3Q7L622 706 aa22.43■■□□□ 1.18
GEN1-208ENST00000614478 KRT27Q7Z3Y8 459 aa22.43■■□□□ 1.18
GEN1-208ENST00000614478 ZBTB40Q9NUA8 1239 aa22.43■■□□□ 1.18
GEN1-208ENST00000614478 HDGFL1Q5TGJ6 251 aa22.43■■□□□ 1.18
GEN1-208ENST00000614478 NFATC2IPQ8NCF5 419 aa22.42■■□□□ 1.18
GEN1-208ENST00000614478 CACNA1FO60840 1977 aa22.41■■□□□ 1.18
GEN1-208ENST00000614478 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
GEN1-208ENST00000614478 CHMP4BQ9H444 224 aaKnown RBP22.41■■□□□ 1.18
GEN1-208ENST00000614478 EIF2S2P20042 333 aaKnown RBP22.4■■□□□ 1.18
GEN1-208ENST00000614478 INTS3Q68E01 1043 aaKnown RBP22.39■■□□□ 1.18
GEN1-208ENST00000614478 MARCH10Q8NA82 808 aaPredicted RBP22.39■■□□□ 1.18
GEN1-208ENST00000614478 DDX54Q8TDD1 881 aaKnown RBP22.39■■□□□ 1.18
GEN1-208ENST00000614478 CHMP4AQ9BY43 222 aa22.39■■□□□ 1.18
GEN1-208ENST00000614478 RWDD1Q9H446 243 aaPredicted RBP22.39■■□□□ 1.18
GEN1-208ENST00000614478 HEG1Q9ULI3 1381 aa22.39■■□□□ 1.17
GEN1-208ENST00000614478 MRC1P22897 1456 aa22.39■■□□□ 1.17
GEN1-208ENST00000614478 ZNF790Q6PG37 636 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms